FFCP PHASE1:Hg19::chr11:1263767..1263777,+: Difference between revisions
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|id=chr11:1263767..1263777,+
|short_description=p@chr11:1263767..1263777,+
|description=CAGE_peak_at_chr11:1263767..1263777,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:1263767..1263777,+ | |||
|coexpression_cluster_id=C251 | |||
|description=CAGE_peak_at_chr11:1263767..1263777,+ | |||
|id=chr11:1263767..1263777,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.33e-29;1!UBERON:0008814;2.37e-15;2!UBERON:0010056;2.37e-15;2!UBERON:0006595;3.17e-09;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!4.91e-19!2;UBERON:0000341!1.56e-18!2;UBERON:0001723!1.12e-12!3;UBERON:0001033!1.12e-12!3;UBERON:0010056!1.12e-12!3;UBERON:0002372!2.16e-10!1;UBERON:0001961!2.16e-10!1;UBERON:0001744!2.16e-10!1;UBERON:0001735!2.16e-10!1;UBERON:0000989!5.30e-10!1;UBERON:0008811!5.30e-10!1;UBERON:0006258!5.30e-10!1;UBERON:0005876!5.30e-10!1;UBERON:0004874!5.30e-10!1;UBERON:0007023!5.22e-09!115;UBERON:0001042!1.56e-08!10;UBERON:0009145!1.56e-08!10;UBERON:0000078!4.40e-08!18;UBERON:0006562!8.43e-08!11;UBERON:0000077!1.09e-07!130;UBERON:0004921!1.14e-07!129;UBERON:0004185!1.14e-07!129;UBERON:0000065!2.23e-07!53;UBERON:0001041!2.29e-07!98;UBERON:0001007!2.85e-07!155;UBERON:0001555!2.85e-07!155;UBERON:0007026!2.85e-07!155;UBERON:0000166!6.05e-07!21;UBERON:0001004!8.62e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;6.36e-57;2!UBERON:0002372;1.33e-29;1!UBERON:0001961;1.33e-29;1!UBERON:0001744;1.33e-29;1!UBERON:0001042;1.33e-29;1!UBERON:0001735;1.33e-29;1!UBERON:0003126;4.02e-17;7!UBERON:0001005;4.02e-17;7!UBERON:0006562;1.54e-15;2!UBERON:0002110;8.17e-11;3!UBERON:0001723;1.09e-10;3!UBERON:0001033;1.09e-10;3!UBERON:0000165;8.81e-10;28!UBERON:0007196;1.59e-08;15!UBERON:0001558;1.59e-08;15!UBERON:0000161;6.38e-07;19!UBERON:0000166;6.38e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,4.77e-57,2;UBERON:0002372,1.78e-29,1;UBERON:0001961,1.78e-29,1;UBERON:0001744,1.78e-29,1;UBERON:0001735,1.78e-29,1;UBERON:0003126,3.71e-17,7;UBERON:0001005,3.71e-17,7;UBERON:0001042,2.81e-12,10;UBERON:0009145,2.81e-12,10;UBERON:0000166,3.20e-12,22;UBERON:0006562,2.98e-11,11;UBERON:0002110,7.42e-11,3;UBERON:0006242,7.42e-11,3;UBERON:0001723,1.09e-10,3;UBERON:0001033,1.09e-10,3;UBERON:0010056,1.09e-10,3;UBERON:0000072,4.06e-10,47;UBERON:0001004,7.36e-10,74;UBERON:0000165,1.92e-09,29;UBERON:0000930,1.92e-09,29;UBERON:0000065,7.27e-09,54;UBERON:0007196,1.53e-08,15;UBERON:0001558,1.53e-08,15;UBERON:0001041,1.99e-08,87;UBERON:0000161,9.82e-08,36;UBERON:0001007,3.58e-07,145;UBERON:0001555,3.58e-07,145;UBERON:0007026,3.58e-07,145;UBERON:0001557,6.57e-07,19 | |||
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|short_description=p@chr11:1263767..1263777,+ | |||
}} | }} |
Latest revision as of 19:46, 23 July 2015
Short description: | p@chr11:1263767..1263777, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1263767..1263777, + |
Coexpression cluster: | C251_gall_tonsil_trachea_CD14_salivary_throat_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 4.77e-57 | 2 |
tonsil | 1.78e-29 | 1 |
mucosa-associated lymphoid tissue | 1.78e-29 | 1 |
lymphoid tissue | 1.78e-29 | 1 |
tonsillar ring | 1.78e-29 | 1 |
trachea | 3.71e-17 | 7 |
respiratory airway | 3.71e-17 | 7 |
chordate pharynx | 2.81e-12 | 10 |
pharyngeal region of foregut | 2.81e-12 | 10 |
oral opening | 3.20e-12 | 22 |
pharynx | 2.98e-11 | 11 |
gallbladder | 7.42e-11 | 3 |
gall bladder primordium | 7.42e-11 | 3 |
tongue | 1.09e-10 | 3 |
gustatory system | 1.09e-10 | 3 |
future tongue | 1.09e-10 | 3 |
segment of respiratory tract | 4.06e-10 | 47 |
respiratory system | 7.36e-10 | 74 |
mouth | 1.92e-09 | 29 |
stomodeum | 1.92e-09 | 29 |
respiratory tract | 7.27e-09 | 54 |
tracheobronchial tree | 1.53e-08 | 15 |
lower respiratory tract | 1.53e-08 | 15 |
foregut | 1.99e-08 | 87 |
orifice | 9.82e-08 | 36 |
digestive system | 3.58e-07 | 145 |
digestive tract | 3.58e-07 | 145 |
primitive gut | 3.58e-07 | 145 |
upper respiratory tract | 6.57e-07 | 19 |