FFCP PHASE1:Hg19::chr14:24732403..24732410,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7051 | |EntrezGene=7051 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11777 | |HGNC=11777 | ||
|TSSclassifier=strong | |||
|UniProt=P22735 | |UniProt=P22735 | ||
|association_with_transcript=5bp_to_ENST00000206765,NM_000359,uc001wod.2,uc010tog.1_5end | |association_with_transcript=5bp_to_ENST00000206765,NM_000359,uc001wod.2,uc010tog.1_5end | ||
|cluster_id=chr14:24732403..24732410,- | |||
|coexpression_cluster_id=C683 | |||
|description=CAGE_peak_4_at_TGM1_5end | |description=CAGE_peak_4_at_TGM1_5end | ||
|id=chr14:24732403..24732410,- | |id=chr14:24732403..24732410,- | ||
|ontology_enrichment_celltype=CL:0002076!1.65e-14!43;CL:0002368!4.61e-11!13;CL:0000223!1.52e-10!59;CL:0000622!5.20e-09!5;CL:0002623!5.49e-09!3;CL:0002159!9.61e-09!13;CL:0002328!1.19e-08!3;CL:0000066!1.19e-08!254;CL:0000039!1.65e-08!7;CL:0000586!1.65e-08!7;CL:0000349!1.69e-08!3;CL:0002577!1.69e-08!3;CL:0000154!1.74e-07!6;CL:0000150!2.67e-07!9;CL:0002202!3.52e-07!9;CL:0002632!3.52e-07!9;CL:0000240!7.40e-07!6;CL:0000311!7.40e-07!6;CL:0000079!7.40e-07!6;CL:0000237!7.40e-07!6;CL:0000036!7.40e-07!6;CL:0000357!7.40e-07!6;CL:0000114!7.40e-07!6;CL:0000575!8.55e-07!2 | |ontology_enrichment_celltype=CL:0002076!1.65e-14!43;CL:0002368!4.61e-11!13;CL:0000223!1.52e-10!59;CL:0000622!5.20e-09!5;CL:0002623!5.49e-09!3;CL:0002159!9.61e-09!13;CL:0002328!1.19e-08!3;CL:0000066!1.19e-08!254;CL:0000039!1.65e-08!7;CL:0000586!1.65e-08!7;CL:0000349!1.69e-08!3;CL:0002577!1.69e-08!3;CL:0000154!1.74e-07!6;CL:0000150!2.67e-07!9;CL:0002202!3.52e-07!9;CL:0002632!3.52e-07!9;CL:0000240!7.40e-07!6;CL:0000311!7.40e-07!6;CL:0000079!7.40e-07!6;CL:0000237!7.40e-07!6;CL:0000036!7.40e-07!6;CL:0000357!7.40e-07!6;CL:0000114!7.40e-07!6;CL:0000575!8.55e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000622;2.57e-22;5!CL:0002623;1.72e-21;3!CL:0002328;8.17e-21;3!CL:0000150;6.00e-19;9!CL:0000154;1.22e-18;6!CL:0000575;1.11e-15;2!CL:0002076;9.50e-13;42!CL:0002202;2.52e-12;9!CL:0002632;2.52e-12;9!CL:0002251;5.11e-12;20!CL:0002252;1.05e-08;1!CL:0002368;1.40e-08;13!CL:0002159;3.20e-08;14!CL:0002336;4.40e-08;1!CL:0002261;4.40e-08;1!CL:0002170;4.40e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,2.50e-22,5;CL:0002623,1.35e-21,3;CL:0002328,1.08e-20,3;CL:0000150,7.68e-19,9;CL:0000154,1.19e-18,6;CL:0002076,7.96e-18,42;CL:0000575,1.07e-15,2;CL:0000223,2.24e-12,58;CL:0002202,2.71e-12,9;CL:0002632,2.71e-12,9;CL:0002251,4.97e-12,20;CL:0002252,1.05e-08,1;CL:0002368,1.48e-08,13;CL:0002159,3.70e-08,14;CL:0002336,5.82e-08,1;CL:0002261,5.82e-08,1;CL:0002170,5.82e-08,1;CL:0000066,5.88e-08,253;CL:0000076,1.95e-07,63 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.41e-08;1!CL:0000223;7.47e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.37e-14!169;UBERON:0000925!3.37e-14!169;UBERON:0006595!3.37e-14!169;UBERON:0001004!3.93e-12!72;UBERON:0003124!8.06e-12!7;UBERON:0000065!2.19e-10!53;UBERON:0001987!3.29e-10!4;UBERON:0004340!3.29e-10!4;UBERON:0000077!4.28e-10!130;UBERON:0005631!6.50e-10!14;UBERON:0000158!6.50e-10!14;UBERON:0004815!1.19e-08!3;UBERON:0002031!1.19e-08!3;UBERON:0000072!1.45e-08!46;UBERON:0000166!1.54e-08!21;UBERON:0003408!1.59e-08!10;UBERON:0001042!1.78e-08!10;UBERON:0009145!1.78e-08!10;UBERON:0001007!1.96e-08!155;UBERON:0001555!1.96e-08!155;UBERON:0007026!1.96e-08!155;UBERON:0001723!2.17e-08!3;UBERON:0001033!2.17e-08!3;UBERON:0010056!2.17e-08!3;UBERON:0004921!2.96e-08!129;UBERON:0004185!2.96e-08!129;UBERON:0007196!3.29e-08!14;UBERON:0001558!3.29e-08!14;UBERON:0000078!4.34e-08!18;UBERON:0000161!8.46e-08!35;UBERON:0001041!1.23e-07!98;UBERON:0006562!1.24e-07!11;UBERON:0000165!2.15e-07!28;UBERON:0000930!2.15e-07!28;UBERON:0001044!2.67e-07!6;UBERON:0003293!2.67e-07!6;UBERON:0003294!2.67e-07!6;UBERON:0010047!2.67e-07!6;UBERON:0000167!2.67e-07!6;UBERON:0000064!8.49e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;8.17e-21;3!UBERON:0002031;8.17e-21;3!UBERON:0000165;8.38e-15;28!UBERON:0002185;9.97e-13;5!UBERON:0001041;1.66e-12;14!UBERON:0001044;5.00e-11;6!UBERON:0003293;5.00e-11;6!UBERON:0003294;5.00e-11;6!UBERON:0010047;5.00e-11;6!UBERON:0003408;5.00e-11;6!UBERON:0000167;5.00e-11;6!UBERON:0001043;1.11e-10;3!UBERON:0001723;1.82e-10;3!UBERON:0001033;1.82e-10;3!UBERON:0007811;3.60e-10;52!UBERON:0000485;3.07e-09;7!UBERON:0000153;4.70e-09;54!UBERON:0000161;5.24e-09;19!UBERON:0000166;5.24e-09;19!UBERON:0000033;6.09e-09;50!UBERON:0002372;1.41e-08;1!UBERON:0001961;1.41e-08;1!UBERON:0001744;1.41e-08;1!UBERON:0001042;1.41e-08;1!UBERON:0001735;1.41e-08;1!UBERON:0000964;2.84e-08;4!UBERON:0010409;2.84e-08;4!UBERON:0000997;4.40e-08;1!UBERON:0005056;4.40e-08;1!UBERON:0004176;4.40e-08;1!UBERON:0001444;1.08e-07;48!UBERON:0007196;1.89e-07;15!UBERON:0001558;1.89e-07;15!UBERON:0005178;5.29e-07;34!UBERON:0002224;5.29e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.08e-20,3;UBERON:0002031,1.08e-20,3;UBERON:0000166,7.97e-15,22;UBERON:0000165,2.97e-14,29;UBERON:0000930,2.97e-14,29;UBERON:0002185,1.17e-12,5;UBERON:0001444,1.21e-12,49;UBERON:0000153,9.71e-12,62;UBERON:0007811,9.71e-12,62;UBERON:0000161,2.54e-11,36;UBERON:0001044,4.44e-11,6;UBERON:0003293,4.44e-11,6;UBERON:0003294,4.44e-11,6;UBERON:0010047,4.44e-11,6;UBERON:0000167,4.44e-11,6;UBERON:0000033,7.50e-11,56;UBERON:0001043,1.11e-10,3;UBERON:0009143,1.11e-10,3;UBERON:0001723,2.05e-10,3;UBERON:0001033,2.05e-10,3;UBERON:0010056,2.05e-10,3;UBERON:0003102,2.15e-09,99;UBERON:0001004,2.31e-09,74;UBERON:0001041,2.42e-09,87;UBERON:0004119,4.25e-09,160;UBERON:0000925,4.25e-09,160;UBERON:0006595,4.25e-09,160;UBERON:0002372,1.31e-08,1;UBERON:0001961,1.31e-08,1;UBERON:0001744,1.31e-08,1;UBERON:0001735,1.31e-08,1;UBERON:0000997,2.69e-08,1;UBERON:0005056,2.69e-08,1;UBERON:0000964,2.79e-08,4;UBERON:0010409,2.79e-08,4;UBERON:0004348,2.79e-08,4;UBERON:0005427,2.79e-08,4;UBERON:0001007,8.92e-08,145;UBERON:0001555,8.92e-08,145;UBERON:0007026,8.92e-08,145;UBERON:0004921,1.89e-07,118;UBERON:0007196,1.97e-07,15;UBERON:0001558,1.97e-07,15;UBERON:0000485,2.98e-07,9;UBERON:0001042,5.94e-07,10;UBERON:0009145,5.94e-07,10;UBERON:0005178,7.46e-07,34;UBERON:0002224,7.46e-07,34;UBERON:0003408,7.88e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,1.50602959389125,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0,0,0,0,5.46442932438813,9.64039551239516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10531672999548,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.548751427043128,1.1240175325762,0.301586917234893,1.20364978706088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,3.32870879020994,0.604780586659361,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,0,0,1.93370076765382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865999014529609,2.68120910214315,0,0,0,0,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,0,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,5.01925479402972,0.769502585037971,0,0.922255617552241,0.448788222048861,1.95565269459615,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95984794828755,0,0.34945333648406,0,0,0,0,4.65547279144413,0,0,0,0,0,0.586654148204409,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07220795687463,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67855409263333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,1.83428598521679,0.115525666150338,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,3.52267479077163,1.87790324803345,2.07377898544228,0.430227358820278,0,0,0,0.9164274741762,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,3.57107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0,0,0,0,0,0,2.34557380091079,0,0.129177819672012,0.248298857183432,0.112131862580613,0,0,4.13661821004227,2.05339980651169,4.98405192307948,0.860666464712116,0.665320713092027,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,1.50602959389125,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0,0,0,0,5.46442932438813,9.64039551239516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10531672999548,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.548751427043128,1.1240175325762,0.301586917234893,1.20364978706088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,3.32870879020994,0.604780586659361,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,0,0,1.93370076765382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865999014529609,2.68120910214315,0,0,0,0,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,0,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,5.01925479402972,0.769502585037971,0,0.922255617552241,0.448788222048861,1.95565269459615,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95984794828755,0,0.34945333648406,0,0,0,0,4.65547279144413,0,0,0,0,0,0.586654148204409,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07220795687463,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67855409263333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,1.83428598521679,0.115525666150338,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,3.52267479077163,1.87790324803345,2.07377898544228,0.430227358820278,0,0,0,0.9164274741762,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,3.57107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0,0,0,0,0,0,2.34557380091079,0,0.129177819672012,0.248298857183432,0.112131862580613,0,0,4.13661821004227,2.05339980651169,4.98405192307948,0.860666464712116,0.665320713092027,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p4@TGM1 | |short_description=p4@TGM1 | ||
}} | }} |
Latest revision as of 14:13, 19 September 2015
Short description: | p4@TGM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TGM1_5end |
Coexpression cluster: | C683_esophagus_tongue_tonsil_Corneal_cervical_Esophageal_throat |
Association with transcript: | 5bp_to_ENST00000206765, NM_000359, uc001wod.2, uc010tog.1_5end |
EntrezGene: | TGM1 |
HGNC: | 11777 |
UniProt: | P22735 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 2.50e-22 | 5 |
acinar cell of salivary gland | 1.35e-21 | 3 |
bronchial epithelial cell | 1.08e-20 | 3 |
glandular epithelial cell | 7.68e-19 | 9 |
protein secreting cell | 1.19e-18 | 6 |
endo-epithelial cell | 7.96e-18 | 42 |
corneal epithelial cell | 1.07e-15 | 2 |
endodermal cell | 2.24e-12 | 58 |
epithelial cell of tracheobronchial tree | 2.71e-12 | 9 |
epithelial cell of lower respiratory tract | 2.71e-12 | 9 |
epithelial cell of alimentary canal | 4.97e-12 | 20 |
epithelial cell of esophagus | 1.05e-08 | 1 |
respiratory epithelial cell | 1.48e-08 | 13 |
general ecto-epithelial cell | 3.70e-08 | 14 |
buccal mucosa cell | 5.82e-08 | 1 |
endothelial cell of viscerocranial mucosa | 5.82e-08 | 1 |
keratinized cell of the oral mucosa | 5.82e-08 | 1 |
epithelial cell | 5.88e-08 | 253 |
squamous epithelial cell | 1.95e-07 | 63 |