FFCP PHASE1:Hg19::chr19:5131763..5131778,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:5131763..5131778,+ | |||
|coexpression_cluster_id=C2499 | |||
|description=CAGE_peak_at_chr19:5131763..5131778,+ | |description=CAGE_peak_at_chr19:5131763..5131778,+ | ||
|id=chr19:5131763..5131778,+ | |id=chr19:5131763..5131778,+ | ||
|ontology_enrichment_celltype=CL:0000945!2.91e-20!24;CL:0000826!2.91e-20!24;CL:0000236!3.32e-16!14;CL:0000738!5.85e-16!140;CL:0002087!4.36e-15!119;CL:0000542!1.87e-14!53;CL:0000051!1.87e-14!53;CL:0000037!3.50e-13!172;CL:0000566!3.50e-13!172;CL:0000838!4.42e-13!52;CL:0000988!6.16e-12!182;CL:0002031!5.99e-10!124;CL:0002032!1.61e-09!165;CL:0000837!1.61e-09!165;CL:0000784!1.97e-09!3;CL:0000842!6.64e-09!3;CL:0000451!1.82e-08!10;CL:0000840!2.19e-07!5;CL:0001029!2.19e-07!5;CL:0000224!9.17e-07!4 | |ontology_enrichment_celltype=CL:0000945!2.91e-20!24;CL:0000826!2.91e-20!24;CL:0000236!3.32e-16!14;CL:0000738!5.85e-16!140;CL:0002087!4.36e-15!119;CL:0000542!1.87e-14!53;CL:0000051!1.87e-14!53;CL:0000037!3.50e-13!172;CL:0000566!3.50e-13!172;CL:0000838!4.42e-13!52;CL:0000988!6.16e-12!182;CL:0002031!5.99e-10!124;CL:0002032!1.61e-09!165;CL:0000837!1.61e-09!165;CL:0000784!1.97e-09!3;CL:0000842!6.64e-09!3;CL:0000451!1.82e-08!10;CL:0000840!2.19e-07!5;CL:0001029!2.19e-07!5;CL:0000224!9.17e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000236;6.72e-49;13!CL:0000945;7.28e-33;24!CL:0000542;2.95e-14;53!CL:0000784;5.39e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.24e-45,14;CL:0000945,6.51e-33,24;CL:0000826,6.51e-33,24;CL:0000542,2.50e-21,53;CL:0000051,2.50e-21,53;CL:0000838,5.25e-18,52;CL:0000784,6.58e-14,3;CL:0002087,1.26e-10,115;CL:0000738,2.49e-10,136;CL:0000037,1.85e-09,168;CL:0000988,7.23e-09,177;CL:0002032,1.78e-08,161;CL:0000837,1.78e-08,161;CL:0002031,1.99e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000051;2.95e-14;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;4.01e-11;1!DOID:0050177;4.01e-11;1!DOID:12603;4.01e-11;1!DOID:0050427;4.01e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,3.28e-11,1;DOID:0050177,3.28e-11,1;DOID:0050427,3.28e-11,1;DOID:12603,4.91e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.11e-10!15;UBERON:0000179!1.11e-10!15;UBERON:0000463!1.11e-10!15;UBERON:0002390!3.37e-07!102;UBERON:0003061!3.37e-07!102;UBERON:0002193!6.96e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;9.20e-09;5!UBERON:0005057;9.20e-09;5 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr19:5131763..5131778,+ | |short_description=p@chr19:5131763..5131778,+ | ||
}} | }} |
Latest revision as of 16:33, 27 July 2015
Short description: | p@chr19:5131763..5131778, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:5131763..5131778, + |
Coexpression cluster: | C2499_acute_CD19_B_xeroderma_spleen_vein_plasma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.24e-45 | 14 |
lymphocyte of B lineage | 6.51e-33 | 24 |
pro-B cell | 6.51e-33 | 24 |
lymphocyte | 2.50e-21 | 53 |
common lymphoid progenitor | 2.50e-21 | 53 |
lymphoid lineage restricted progenitor cell | 5.25e-18 | 52 |
plasmacytoid dendritic cell | 6.58e-14 | 3 |
nongranular leukocyte | 1.26e-10 | 115 |
leukocyte | 2.49e-10 | 136 |
hematopoietic stem cell | 1.85e-09 | 168 |
hematopoietic cell | 7.23e-09 | 177 |
hematopoietic oligopotent progenitor cell | 1.78e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.78e-08 | 161 |
hematopoietic lineage restricted progenitor cell | 1.99e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 3.28e-11 | 1 |
monogenic disease | 3.28e-11 | 1 |
xeroderma pigmentosum | 3.28e-11 | 1 |
acute leukemia | 4.91e-11 | 1 |