FFCP PHASE1:Hg19::chr11:2160293..2160310,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:2160293..2160310,+
|short_description=p3@BC017277
|description=CAGE_peak_3_at_BC017277_5end
|association_with_transcript=278bp_to_BC017277_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=278bp_to_BC017277_5end | |||
|cluster_id=chr11:2160293..2160310,+ | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_3_at_BC017277_5end | |||
|id=chr11:2160293..2160310,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;4.85e-16;19!CL:0000244;1.90e-08;4!CL:0000731;1.90e-08;4!CL:0002577;5.53e-08;3!CL:0002541;5.72e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.94e-16,19;CL:0000244,1.67e-08,4;CL:0000731,1.67e-08,4;CL:0002541,5.67e-08,3;CL:0002577,5.67e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!6.14e-12!14;UBERON:0000158!6.14e-12!14;UBERON:0000478!4.55e-10!24;UBERON:0003124!3.91e-09!7;UBERON:0000481!6.53e-09!347;UBERON:0007023!1.05e-08!115;UBERON:0004119!3.60e-08!169;UBERON:0000925!3.60e-08!169;UBERON:0006595!3.60e-08!169;UBERON:0000119!5.36e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;9.61e-17;24!UBERON:0005631;9.83e-15;10!UBERON:0000158;9.83e-15;10!UBERON:0001987;4.48e-10;4!UBERON:0000365;5.59e-10;5!UBERON:0000922;3.15e-09;49!UBERON:0000305;7.97e-09;7!UBERON:0005910;2.96e-08;6!UBERON:0003124;5.72e-08;3!UBERON:0000920;5.72e-08;3!UBERON:0005409;1.48e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.10e-23,14;UBERON:0000158,7.10e-23,14;UBERON:0000478,9.66e-17,24;UBERON:0003124,2.35e-16,7;UBERON:0001987,4.54e-10,4;UBERON:0004340,4.54e-10,4;UBERON:0000365,6.08e-10,5;UBERON:0000305,7.99e-09,7;UBERON:0005910,3.17e-08,6;UBERON:0000920,5.67e-08,3;UBERON:0004871,1.20e-07,8;UBERON:0001008,2.90e-07,48 | |||
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| ||
|short_description=p3@BC017277 | |||
}} | }} |
Latest revision as of 21:04, 23 July 2015
Short description: | p3@BC017277 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BC017277_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 278bp_to_BC017277_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.94e-16 | 19 |
transitional epithelial cell | 1.67e-08 | 4 |
urothelial cell | 1.67e-08 | 4 |
chorionic membrane mesenchymal stem cell | 5.67e-08 | 3 |
placental epithelial cell | 5.67e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.10e-23 | 14 |
membranous layer | 7.10e-23 | 14 |
extraembryonic structure | 9.66e-17 | 24 |
chorion | 2.35e-16 | 7 |
placenta | 4.54e-10 | 4 |
allantois | 4.54e-10 | 4 |
urothelium | 6.08e-10 | 5 |
amnion | 7.99e-09 | 7 |
transitional epithelium | 3.17e-08 | 6 |
egg chorion | 5.67e-08 | 3 |
somatic layer of lateral plate mesoderm | 1.20e-07 | 8 |
renal system | 2.90e-07 | 48 |