FFCP PHASE1:Hg19::chr1:1243966..1244033,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=126789 | |EntrezGene=126789 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26914 | |HGNC=26914 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N0Z8 | |UniProt=Q8N0Z8 | ||
|association_with_transcript=0bp_to_ENST00000470520,NM_153339,uc001aed.2,uc010nyi.1_5end | |association_with_transcript=0bp_to_ENST00000470520,NM_153339,uc001aed.2,uc010nyi.1_5end | ||
|cluster_id=chr1:1243966..1244033,+ | |||
|coexpression_cluster_id=C534 | |||
|description=CAGE_peak_1_at_PUSL1_5end | |description=CAGE_peak_1_at_PUSL1_5end | ||
|id=chr1:1243966..1244033,+ | |id=chr1:1243966..1244033,+ | ||
|ontology_enrichment_celltype=CL:0000548!3.54e-23!679;CL:0000004!3.54e-23!679;CL:0000255!3.54e-23!679;CL:0000012!1.60e-22!682;CL:0000066!8.93e-22!254;CL:0002321!8.72e-20!248;CL:0000220!9.02e-20!246;CL:0000003!2.67e-16!722;CL:0000144!2.20e-15!625;CL:0002371!1.21e-13!591;CL:0000055!5.35e-11!180;CL:0000222!5.63e-11!119;CL:0000183!9.27e-11!59;CL:0000192!4.32e-10!42;CL:0000514!4.32e-10!42;CL:0000393!1.31e-09!60;CL:0000211!1.31e-09!60;CL:0000187!8.27e-09!54;CL:0000680!1.07e-08!57;CL:0000056!1.07e-08!57;CL:0000355!1.07e-08!57;CL:0000063!9.45e-08!578;CL:0000359!1.52e-07!32;CL:1000497!8.84e-07!18;CL:0002518!8.84e-07!18;CL:1000449!9.32e-07!16 | |ontology_enrichment_celltype=CL:0000548!3.54e-23!679;CL:0000004!3.54e-23!679;CL:0000255!3.54e-23!679;CL:0000012!1.60e-22!682;CL:0000066!8.93e-22!254;CL:0002321!8.72e-20!248;CL:0000220!9.02e-20!246;CL:0000003!2.67e-16!722;CL:0000144!2.20e-15!625;CL:0002371!1.21e-13!591;CL:0000055!5.35e-11!180;CL:0000222!5.63e-11!119;CL:0000183!9.27e-11!59;CL:0000192!4.32e-10!42;CL:0000514!4.32e-10!42;CL:0000393!1.31e-09!60;CL:0000211!1.31e-09!60;CL:0000187!8.27e-09!54;CL:0000680!1.07e-08!57;CL:0000056!1.07e-08!57;CL:0000355!1.07e-08!57;CL:0000063!9.45e-08!578;CL:0000359!1.52e-07!32;CL:1000497!8.84e-07!18;CL:0002518!8.84e-07!18;CL:1000449!9.32e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000192;8.44e-08;43!CL:0000359;2.53e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.35e-21,253;CL:0002321,3.69e-20,250;CL:0000222,2.78e-11,121;CL:0000192,3.24e-10,43;CL:0000514,3.24e-10,43;CL:0000393,9.50e-10,61;CL:0000211,9.50e-10,61;CL:0000187,6.03e-09,55;CL:0000680,7.82e-09,58;CL:0000056,7.82e-09,58;CL:0000355,7.82e-09,58;CL:0000359,1.52e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;8.44e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!1.69e-13!238;UBERON:0009142!1.69e-13!238;UBERON:0002100!1.22e-11!216;UBERON:0005256!2.65e-11!143;UBERON:0000486!3.83e-10!82;UBERON:0006554!1.88e-09!44;UBERON:0001008!5.26e-09!45;UBERON:0000490!1.02e-08!138;UBERON:0001637!1.47e-07!42;UBERON:0003509!1.47e-07!42;UBERON:0004572!1.47e-07!42;UBERON:0004290!1.72e-07!70;UBERON:0000914!2.89e-07!83;UBERON:0002329!2.89e-07!83;UBERON:0003077!2.89e-07!83;UBERON:0003059!2.89e-07!83;UBERON:0007282!2.89e-07!83;UBERON:0009618!2.89e-07!83;UBERON:0007285!2.89e-07!83;UBERON:0003914!5.67e-07!118;UBERON:0004211!9.32e-07!16;UBERON:0001285!9.32e-07!16;UBERON:0007684!9.32e-07!16;UBERON:0003220!9.32e-07!16;UBERON:0004208!9.32e-07!16;UBERON:0009569!9.82e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.40e-07;30!UBERON:0001008;1.40e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,4.30e-12,199;UBERON:0003104,4.06e-11,160;UBERON:0009142,4.06e-11,160;UBERON:0006554,2.36e-10,47;UBERON:0000486,2.75e-10,83;UBERON:0001008,6.81e-10,48;UBERON:0000490,8.88e-10,148;UBERON:0007503,1.53e-09,78;UBERON:0005256,3.08e-09,122;UBERON:0002329,1.26e-07,71;UBERON:0003059,1.26e-07,71;UBERON:0007282,1.26e-07,71;UBERON:0004290,1.26e-07,71;UBERON:0009618,1.26e-07,71;UBERON:0001637,1.47e-07,42;UBERON:0003509,1.47e-07,42;UBERON:0004572,1.47e-07,42;UBERON:0007524,2.12e-07,73;UBERON:0003077,3.41e-07,72;UBERON:0007285,3.41e-07,72;UBERON:0002049,5.82e-07,78;UBERON:0007798,5.82e-07,78;UBERON:0003914,7.46e-07,117;UBERON:0001134,9.73e-07,62;UBERON:0002036,9.73e-07,62;UBERON:0003082,9.73e-07,62 | |||
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| ||
|short_description=p1@PUSL1 | |short_description=p1@PUSL1 | ||
}} | }} |
Latest revision as of 14:03, 16 September 2015
Short description: | p1@PUSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PUSL1_5end |
Coexpression cluster: | C534_Mesenchymal_Alveolar_Renal_Placental_Fibroblast_Smooth_Tracheal |
Association with transcript: | 0bp_to_ENST00000470520, NM_153339, uc001aed.2, uc010nyi.1_5end |
EntrezGene: | PUSL1 |
HGNC: | 26914 |
UniProt: | Q8N0Z8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.35e-21 | 253 |
embryonic cell | 3.69e-20 | 250 |
mesodermal cell | 2.78e-11 | 121 |
smooth muscle cell | 3.24e-10 | 43 |
smooth muscle myoblast | 3.24e-10 | 43 |
electrically responsive cell | 9.50e-10 | 61 |
electrically active cell | 9.50e-10 | 61 |
muscle cell | 6.03e-09 | 55 |
muscle precursor cell | 7.82e-09 | 58 |
myoblast | 7.82e-09 | 58 |
multi-potent skeletal muscle stem cell | 7.82e-09 | 58 |
vascular associated smooth muscle cell | 1.52e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
trunk | 4.30e-12 | 199 |
mesenchyme | 4.06e-11 | 160 |
entire embryonic mesenchyme | 4.06e-11 | 160 |
urinary system structure | 2.36e-10 | 47 |
multilaminar epithelium | 2.75e-10 | 83 |
renal system | 6.81e-10 | 48 |
unilaminar epithelium | 8.88e-10 | 148 |
epithelial vesicle | 1.53e-09 | 78 |
trunk mesenchyme | 3.08e-09 | 122 |
somite | 1.26e-07 | 71 |
presomitic mesoderm | 1.26e-07 | 71 |
presumptive segmental plate | 1.26e-07 | 71 |
dermomyotome | 1.26e-07 | 71 |
trunk paraxial mesoderm | 1.26e-07 | 71 |
artery | 1.47e-07 | 42 |
arterial blood vessel | 1.47e-07 | 42 |
arterial system | 1.47e-07 | 42 |
dense mesenchyme tissue | 2.12e-07 | 73 |
paraxial mesoderm | 3.41e-07 | 72 |
presumptive paraxial mesoderm | 3.41e-07 | 72 |
vasculature | 5.82e-07 | 78 |
vascular system | 5.82e-07 | 78 |
epithelial tube | 7.46e-07 | 117 |
skeletal muscle tissue | 9.73e-07 | 62 |
striated muscle tissue | 9.73e-07 | 62 |
myotome | 9.73e-07 | 62 |