FFCP PHASE1:Hg19::chr1:146989697..146989701,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100289211 | |EntrezGene=100289211 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000437831,NR_038423,uc001epp.2_5end | |association_with_transcript=0bp_to_ENST00000437831,NR_038423,uc001epp.2_5end | ||
|cluster_id=chr1:146989697..146989701,- | |||
|coexpression_cluster_id=C159 | |||
|description=CAGE_peak_1_at_LOC100289211_5end | |description=CAGE_peak_1_at_LOC100289211_5end | ||
|id=chr1:146989697..146989701,- | |id=chr1:146989697..146989701,- | ||
|ontology_enrichment_celltype=CL:0000039!1.67e-08!7;CL:0000586!1.67e-08!7 | |ontology_enrichment_celltype=CL:0000039!1.67e-08!7;CL:0000586!1.67e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.03e-32;7!CL:0000586;1.03e-32;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.09e-32,7;CL:0000586,1.09e-32,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.73e-16;10!UBERON:0005564;6.73e-16;10 | |||
|ontology_enrichment_disease=DOID:162!3.26e-25!235;DOID:14566!4.07e-24!239;DOID:0050687!9.04e-19!143;DOID:305!1.90e-14!106;DOID:0050686!1.33e-12!137;DOID:3095!4.50e-09!22;DOID:2994!4.50e-09!22;DOID:1036!5.57e-09!8;DOID:3119!2.09e-08!14;DOID:2531!3.28e-07!51;DOID:0060083!3.28e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:3095;6.84e-22;22!DOID:2994;6.84e-22;22!DOID:1036;1.72e-07;8!DOID:1799;2.31e-07;1!DOID:10165;2.31e-07;1!DOID:1798;2.31e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,6.35e-22,22;DOID:2994,6.35e-22,22;DOID:0050687,5.16e-12,143;DOID:162,1.48e-10,235;DOID:14566,3.08e-10,239;DOID:305,1.59e-07,106;DOID:1036,1.92e-07,8;DOID:1799,2.80e-07,1;DOID:10165,2.80e-07,1;DOID:1798,2.80e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003135!1.98e-08!11;UBERON:0003101!4.48e-07!22;UBERON:0000079!4.48e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;2.11e-20;11!UBERON:0000473;6.50e-20;8!UBERON:0003101;6.18e-10;22!UBERON:0000079;6.18e-10;22!UBERON:0001301;1.39e-07;1!UBERON:0000991;1.89e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.29e-20,11;UBERON:0000473,6.63e-20,8;UBERON:0003101,6.44e-10,22;UBERON:0000079,6.44e-10,22;UBERON:0001301,1.58e-07,1;UBERON:0000991,1.90e-07,21;UBERON:0009196,1.90e-07,21;UBERON:0009117,1.90e-07,21;UBERON:0005564,1.90e-07,21;UBERON:0003133,2.10e-07,48;UBERON:0004176,4.27e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,12.5739912477804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0.245976877086227,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.371606350251437,0.144269212976445,0.355709216742071,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,0,0.121360521749513,1.33732061132974,0,0.47748896947538,0,0,0,0.140669416410513,0,0,0,0,0,0,0.20453736500431,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0.455173793141999,98.3961626633006,0,0.689486746482929,0.583209226766509,0,0,0,0,0,0,0,0,0.557694977114413,0.0769502585037971,0.113942055847001,125.196200082717,10.7709173291727,35.2017485027306,3.82801391678303,0,0,1.02193298195737,0,0,0.902382642468723,0.980312671588698,2.3495022176618,2.65655225813859,0.476809736941136,0,0.489698424477443,0.424059214301822,0.865554558968364,0,0,0,0.296521128680622,0,0,0,0,0,0,0.391329237864179,0,0.789168805698781,0,0,0.189559738885464,56.3712822804347,2.69589297632843,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,2.09672001890436,0.171986032471617,0.19351266257817,0.292357268344742,0.164230914106418,0,0,0,0.685209623233754,0.19871461170299,0,0,0,0,0,0.288180834308212,0.229073192331831,0,0.14405479798815,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0.262887354279314,0.558564802544508,0,0,0,0,0,0.335917362433631,0,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0.76205998859206,0,0,0.482259445395058,0.550157746388935,0.415440338029185,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0.656740165994712,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0,0,0,0,0.395223263795889,0.487170393523584,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.553394539744923,0,0,0,0,0,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,0,0,6.01103545127163,0.215649622793364,0,1.09209638192014,0,0,0.371807292777007,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,9.71662413160154,0.943757786781923,0,0,0,0,0.198916222116275,0.0752103283492573,0.20170506870352,0,1.04762677792569,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0.127762427639595,1.07140367175657,0.336283722218824,0,0,0.177404740325278,0.345701962667338,0,0,0,0,0.444925607568277,0,0,0.280272163313789,0,0.215927591218621,0,0.0714765441766563,0.158013611732727,0.23248285073625,1.04314963381548,0,0,0.17071847709395,0,0,0,0,0,0,35.6737343513968,62.1100310335331,0,0.196300467230486,0.121917924982269,0,0.205325613712494,0,0,0.233939463462106,2.38740930193642,0,0.33883824611688,0,0.754814217833368,0,0,15.5204707799303,0,0,0,0,0,0,0,0.128915775947154,0.0999411559249289,0.357107877211315,0.352894871715692,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.630832124175395,1.42045243552804,0.253397002022874,3.56960904096936,0,81.6026707869423,1.25353769646188,23.7187325423089,34.567372790147,0,0,0,0,0,0.248298857183432,0,0.0636471582781649,0.202117188958219,0,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 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| ||
|short_description=p1@LOC100289211 | |short_description=p1@LOC100289211 | ||
}} | }} |
Latest revision as of 19:24, 16 September 2015
Short description: | p1@LOC100289211 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100289211_5end |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | 0bp_to_ENST00000437831, NR_038423, uc001epp.2_5end |
EntrezGene: | LOC100289211 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.09e-32 | 7 |
germ cell | 1.09e-32 | 7 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 2.29e-20 | 11 |
testis | 6.63e-20 | 8 |
male organism | 6.44e-10 | 22 |
male reproductive system | 6.44e-10 | 22 |
epididymis | 1.58e-07 | 1 |
gonad | 1.90e-07 | 21 |
indifferent external genitalia | 1.90e-07 | 21 |
indifferent gonad | 1.90e-07 | 21 |
gonad primordium | 1.90e-07 | 21 |
reproductive organ | 2.10e-07 | 48 |
external genitalia | 4.27e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 6.35e-22 | 22 |
germ cell cancer | 6.35e-22 | 22 |
cell type cancer | 5.16e-12 | 143 |
cancer | 1.48e-10 | 235 |
disease of cellular proliferation | 3.08e-10 | 239 |
carcinoma | 1.59e-07 | 106 |
chronic leukemia | 1.92e-07 | 8 |
islet cell tumor | 2.80e-07 | 1 |
endocrine pancreas cancer | 2.80e-07 | 1 |
pancreatic endocrine carcinoma | 2.80e-07 | 1 |