FFCP PHASE1:Hg19::chr11:46740744..46740786,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:46740744..46740786,+
|short_description=p1@F2
|description=CAGE_peak_1_at_F2_5end
|association_with_transcript=0bp_to_ENST00000469189,ENST00000530231_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2147 | |EntrezGene=2147 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3535 | |HGNC=3535 | ||
|TSSclassifier=strong | |||
|UniProt=E9PIT3 | |UniProt=E9PIT3 | ||
|association_with_transcript=0bp_to_ENST00000469189,ENST00000530231_5end | |||
|cluster_id=chr11:46740744..46740786,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_F2_5end | |||
|id=chr11:46740744..46740786,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.94e-18!12;CL:0000417!1.94e-18!12;CL:0000668!1.94e-18!12;CL:0000414!1.94e-18!12;CL:0000412!1.94e-18!12;CL:0000182!1.94e-18!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.34e-29;12!CL:0002322;4.53e-10;5!CL:0000148;1.21e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.47e-29,12;CL:0002322,4.53e-10,5;CL:0000223,1.17e-09,58;CL:0000148,1.21e-08,10;CL:0000541,1.21e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.35e-24;11!UBERON:0009497;1.80e-20;13!UBERON:0003104;1.16e-15;31!UBERON:0001041;9.29e-11;30 | |||
|ontology_enrichment_disease=DOID:114!2.99e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.47e-21!19;UBERON:0006925!5.47e-21!19;UBERON:0008836!5.47e-21!19;UBERON:0005057!2.33e-20!26;UBERON:0009854!5.85e-20!23;UBERON:0009497!3.42e-18!25;UBERON:0000015!3.42e-18!25;UBERON:0002423!3.42e-18!25;UBERON:0006235!3.42e-18!25;UBERON:0004161!3.42e-18!25;UBERON:0005172!6.60e-18!55;UBERON:0005173!6.60e-18!55;UBERON:0008835!8.94e-18!22;UBERON:0003894!8.94e-18!22;UBERON:0009856!2.53e-17!26;UBERON:0002417!1.14e-15!61;UBERON:0000916!1.14e-15!61;UBERON:0007499!2.46e-15!25;UBERON:0003929!1.10e-14!54;UBERON:0002368!3.81e-14!35;UBERON:0002365!7.00e-12!31;UBERON:0002330!7.00e-12!31;UBERON:0000949!2.52e-10!45;UBERON:0005911!1.97e-09!82;UBERON:0005177!6.71e-09!107;UBERON:0002530!1.72e-08!59;UBERON:0009569!3.62e-08!113;UBERON:0003914!1.89e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.08e-28;19!UBERON:0006925;3.08e-28;19!UBERON:0002423;5.21e-21;25!UBERON:0002365;3.33e-16;31!UBERON:0002330;3.33e-16;31!UBERON:0002368;4.42e-14;33!UBERON:0000949;7.02e-09;43!UBERON:0005172;1.10e-08;52!UBERON:0005173;1.10e-08;52!UBERON:0002417;5.43e-07;58!UBERON:0000916;5.43e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.17e-28,19;UBERON:0006925,3.17e-28,19;UBERON:0008836,3.17e-28,19;UBERON:0008835,4.03e-24,22;UBERON:0003894,4.03e-24,22;UBERON:0009854,5.44e-23,23;UBERON:0007499,5.32e-21,25;UBERON:0009497,5.32e-21,25;UBERON:0000015,5.32e-21,25;UBERON:0002423,5.32e-21,25;UBERON:0006235,5.32e-21,25;UBERON:0004161,5.32e-21,25;UBERON:0009856,4.04e-20,26;UBERON:0002365,1.43e-16,31;UBERON:0002330,1.43e-16,31;UBERON:0003929,4.95e-15,54;UBERON:0005172,9.43e-15,54;UBERON:0005173,9.43e-15,54;UBERON:0002368,1.84e-14,35;UBERON:0002417,5.22e-13,60;UBERON:0000916,5.22e-13,60;UBERON:0000949,7.84e-11,45;UBERON:0005911,1.66e-10,82;UBERON:0002530,1.57e-09,59;UBERON:0005177,7.64e-08,101;UBERON:0004921,2.01e-07,118;UBERON:0001041,6.28e-07,87;UBERON:0009569,8.40e-07,112 | |||
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| ||
|short_description=p1@F2 | |||
}} | }} |
Latest revision as of 03:36, 18 September 2015
Short description: | p1@F2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_F2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000469189, ENST00000530231_5end |
EntrezGene: | F2 |
HGNC: | 3535 |
UniProt: | E9PIT3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.47e-29 | 12 |
embryonic stem cell | 4.53e-10 | 5 |
endodermal cell | 1.17e-09 | 58 |
melanocyte | 1.21e-08 | 10 |
melanoblast | 1.21e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
liver | 3.17e-28 | 19 |
digestive gland | 3.17e-28 | 19 |
liver bud | 3.17e-28 | 19 |
hepatic diverticulum | 4.03e-24 | 22 |
liver primordium | 4.03e-24 | 22 |
digestive tract diverticulum | 5.44e-23 | 23 |
epithelial sac | 5.32e-21 | 25 |
epithelium of foregut-midgut junction | 5.32e-21 | 25 |
anatomical boundary | 5.32e-21 | 25 |
hepatobiliary system | 5.32e-21 | 25 |
foregut-midgut junction | 5.32e-21 | 25 |
septum transversum | 5.32e-21 | 25 |
sac | 4.04e-20 | 26 |
exocrine gland | 1.43e-16 | 31 |
exocrine system | 1.43e-16 | 31 |
gut epithelium | 4.95e-15 | 54 |
abdomen element | 9.43e-15 | 54 |
abdominal segment element | 9.43e-15 | 54 |
endocrine gland | 1.84e-14 | 35 |
abdominal segment of trunk | 5.22e-13 | 60 |
abdomen | 5.22e-13 | 60 |
endocrine system | 7.84e-11 | 45 |
endo-epithelium | 1.66e-10 | 82 |
gland | 1.57e-09 | 59 |
trunk region element | 7.64e-08 | 101 |
subdivision of digestive tract | 2.01e-07 | 118 |
foregut | 6.28e-07 | 87 |
subdivision of trunk | 8.40e-07 | 112 |