FFCP PHASE1:Hg19::chr15:64126110..64126154,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8925 | |EntrezGene=8925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4867 | |HGNC=4867 | ||
|TSSclassifier=strong | |||
|UniProt=E7ENU6,Q15751 | |UniProt=E7ENU6,Q15751 | ||
|association_with_transcript=0bp_to_ENST00000425434,ENST00000558532,ENST00000559886,ENST00000560462,ENST00000561400,NM_003922,uc002amp.2,uc002amq.1,uc010bgt.1,uc010uil.1_5end | |association_with_transcript=0bp_to_ENST00000425434,ENST00000558532,ENST00000559886,ENST00000560462,ENST00000561400,NM_003922,uc002amp.2,uc002amq.1,uc010bgt.1,uc010uil.1_5end | ||
|cluster_id=chr15:64126110..64126154,- | |||
|coexpression_cluster_id=C3044 | |||
|description=CAGE_peak_1_at_HERC1_5end | |description=CAGE_peak_1_at_HERC1_5end | ||
|id=chr15:64126110..64126154,- | |id=chr15:64126110..64126154,- | ||
|ontology_enrichment_celltype=CL:0000037!1.31e-34!172;CL:0000566!1.31e-34!172;CL:0000738!1.08e-32!140;CL:0002032!1.24e-31!165;CL:0000837!1.24e-31!165;CL:0000988!1.35e-30!182;CL:0002031!4.92e-26!124;CL:0002087!1.30e-23!119;CL:0000763!1.01e-16!112;CL:0000049!1.01e-16!112;CL:0000838!8.71e-15!52;CL:0000542!1.52e-14!53;CL:0000051!1.52e-14!53;CL:0000766!5.79e-14!76;CL:0000839!2.30e-11!70;CL:0000557!2.94e-11!71;CL:0000791!3.95e-10!18;CL:0000789!3.95e-10!18;CL:0002420!3.95e-10!18;CL:0002419!3.95e-10!18;CL:0000790!3.95e-10!18;CL:0002009!4.95e-09!65;CL:0002194!1.23e-08!63;CL:0000576!1.23e-08!63;CL:0000040!1.23e-08!63;CL:0000559!1.23e-08!63;CL:0000084!4.03e-08!25;CL:0000827!4.03e-08!25;CL:0002057!1.02e-07!42;CL:0000860!2.16e-07!45 | |ontology_enrichment_celltype=CL:0000037!1.31e-34!172;CL:0000566!1.31e-34!172;CL:0000738!1.08e-32!140;CL:0002032!1.24e-31!165;CL:0000837!1.24e-31!165;CL:0000988!1.35e-30!182;CL:0002031!4.92e-26!124;CL:0002087!1.30e-23!119;CL:0000763!1.01e-16!112;CL:0000049!1.01e-16!112;CL:0000838!8.71e-15!52;CL:0000542!1.52e-14!53;CL:0000051!1.52e-14!53;CL:0000766!5.79e-14!76;CL:0000839!2.30e-11!70;CL:0000557!2.94e-11!71;CL:0000791!3.95e-10!18;CL:0000789!3.95e-10!18;CL:0002420!3.95e-10!18;CL:0002419!3.95e-10!18;CL:0000790!3.95e-10!18;CL:0002009!4.95e-09!65;CL:0002194!1.23e-08!63;CL:0000576!1.23e-08!63;CL:0000040!1.23e-08!63;CL:0000559!1.23e-08!63;CL:0000084!4.03e-08!25;CL:0000827!4.03e-08!25;CL:0002057!1.02e-07!42;CL:0000860!2.16e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.87e-10;18!CL:0000789;3.87e-10;18!CL:0002419;3.87e-10;18!CL:0000542;4.19e-09;53!CL:0000084;3.73e-08;25!CL:0002087;1.30e-07;104!CL:0000738;3.31e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.91e-35,168;CL:0000738,1.70e-33,136;CL:0002032,2.91e-32,161;CL:0000837,2.91e-32,161;CL:0000988,1.08e-31,177;CL:0002031,9.08e-27,120;CL:0002087,2.62e-24,115;CL:0000763,3.03e-17,108;CL:0000049,3.03e-17,108;CL:0000838,8.71e-15,52;CL:0000766,1.25e-14,72;CL:0000542,1.52e-14,53;CL:0000051,1.52e-14,53;CL:0000839,6.03e-12,66;CL:0000557,7.98e-12,67;CL:0000791,3.95e-10,18;CL:0000789,3.95e-10,18;CL:0002420,3.95e-10,18;CL:0002419,3.95e-10,18;CL:0000790,3.95e-10,18;CL:0002009,1.61e-09,61;CL:0002194,4.07e-09,59;CL:0000576,4.07e-09,59;CL:0000040,4.07e-09,59;CL:0000559,4.07e-09,59;CL:0000473,3.78e-08,48;CL:0000234,3.78e-08,48;CL:0000084,4.03e-08,25;CL:0000827,4.03e-08,25;CL:0000860,1.02e-07,42;CL:0002057,1.02e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000790;3.87e-10;18!CL:0000051;4.19e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.75e-35!115;UBERON:0001049!3.89e-19!57;UBERON:0005068!3.89e-19!57;UBERON:0006241!3.89e-19!57;UBERON:0007135!3.89e-19!57;UBERON:0003080!3.10e-18!42;UBERON:0002780!4.85e-18!41;UBERON:0001890!4.85e-18!41;UBERON:0006240!4.85e-18!41;UBERON:0002616!2.02e-17!59;UBERON:0001017!3.37e-16!82;UBERON:0000955!4.19e-16!69;UBERON:0006238!4.19e-16!69;UBERON:0001893!1.35e-15!34;UBERON:0002020!1.86e-15!34;UBERON:0003528!1.86e-15!34;UBERON:0002791!4.75e-15!33;UBERON:0001869!5.53e-15!32;UBERON:0005743!3.16e-14!86;UBERON:0002390!3.34e-14!102;UBERON:0003061!3.34e-14!102;UBERON:0002193!5.16e-14!112;UBERON:0000073!2.18e-13!94;UBERON:0001016!2.18e-13!94;UBERON:0002619!3.19e-13!22;UBERON:0001950!2.72e-12!20;UBERON:0000956!1.00e-11!25;UBERON:0000203!1.00e-11!25;UBERON:0002346!1.75e-08!90;UBERON:0002371!2.39e-08!80;UBERON:0003075!3.37e-08!86;UBERON:0007284!3.37e-08!86;UBERON:0001474!1.62e-07!86;UBERON:0003056!4.83e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!1.75e-35!115;UBERON:0001049!3.89e-19!57;UBERON:0005068!3.89e-19!57;UBERON:0006241!3.89e-19!57;UBERON:0007135!3.89e-19!57;UBERON:0003080!3.10e-18!42;UBERON:0002780!4.85e-18!41;UBERON:0001890!4.85e-18!41;UBERON:0006240!4.85e-18!41;UBERON:0002616!2.02e-17!59;UBERON:0001017!3.37e-16!82;UBERON:0000955!4.19e-16!69;UBERON:0006238!4.19e-16!69;UBERON:0001893!1.35e-15!34;UBERON:0002020!1.86e-15!34;UBERON:0003528!1.86e-15!34;UBERON:0002791!4.75e-15!33;UBERON:0001869!5.53e-15!32;UBERON:0005743!3.16e-14!86;UBERON:0002390!3.34e-14!102;UBERON:0003061!3.34e-14!102;UBERON:0002193!5.16e-14!112;UBERON:0000073!2.18e-13!94;UBERON:0001016!2.18e-13!94;UBERON:0002619!3.19e-13!22;UBERON:0001950!2.72e-12!20;UBERON:0000956!1.00e-11!25;UBERON:0000203!1.00e-11!25;UBERON:0002346!1.75e-08!90;UBERON:0002371!2.39e-08!80;UBERON:0003075!3.37e-08!86;UBERON:0007284!3.37e-08!86;UBERON:0001474!1.62e-07!86;UBERON:0003056!4.83e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.61e-13;32!UBERON:0001893;2.32e-13;34!UBERON:0002791;2.68e-13;32!UBERON:0002780;2.79e-13;41!UBERON:0001890;2.79e-13;41!UBERON:0003528;2.81e-13;34!UBERON:0002020;2.81e-13;34!UBERON:0002619;3.16e-13;22!UBERON:0001950;2.70e-12;20!UBERON:0000956;9.90e-12;25!UBERON:0000203;9.90e-12;25!UBERON:0000073;5.94e-11;53!UBERON:0002616;5.94e-11;53!UBERON:0007023;3.37e-10;114!UBERON:0001017;3.57e-08;75!UBERON:0000955;6.62e-08;68!UBERON:0001016;3.76e-07;83 | |||
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| ||
|short_description=p1@HERC1 | |short_description=p1@HERC1 | ||
}} | }} |
Latest revision as of 12:58, 18 September 2015
Short description: | p1@HERC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HERC1_5end |
Coexpression cluster: | C3044_Eosinophils_CD4_Neutrophils_CD34_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000425434, ENST00000558532, ENST00000559886, ENST00000560462, ENST00000561400, NM_003922, uc002amp.2, uc002amq.1, uc010bgt.1, uc010uil.1_5end |
EntrezGene: | HERC1 |
HGNC: | 4867 |
UniProt: | E7ENU6Q15751 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.03e-35 | 114 |
neural tube | 6.44e-19 | 56 |
neural rod | 6.44e-19 | 56 |
future spinal cord | 6.44e-19 | 56 |
neural keel | 6.44e-19 | 56 |
regional part of nervous system | 3.10e-18 | 53 |
regional part of brain | 3.10e-18 | 53 |
regional part of forebrain | 4.85e-18 | 41 |
forebrain | 4.85e-18 | 41 |
anterior neural tube | 4.85e-18 | 41 |
future forebrain | 4.85e-18 | 41 |
central nervous system | 5.72e-16 | 81 |
brain | 7.08e-16 | 68 |
future brain | 7.08e-16 | 68 |
telencephalon | 1.35e-15 | 34 |
brain grey matter | 1.86e-15 | 34 |
gray matter | 1.86e-15 | 34 |
cerebral hemisphere | 5.53e-15 | 32 |
nervous system | 6.25e-15 | 89 |
regional part of telencephalon | 1.06e-14 | 32 |
hematopoietic system | 1.08e-14 | 98 |
blood island | 1.08e-14 | 98 |
hemolymphoid system | 1.90e-14 | 108 |
regional part of cerebral cortex | 3.19e-13 | 22 |
neocortex | 2.72e-12 | 20 |
cerebral cortex | 1.00e-11 | 25 |
pallium | 1.00e-11 | 25 |
immune system | 1.85e-10 | 93 |
neurectoderm | 6.52e-09 | 86 |
bone marrow | 1.05e-08 | 76 |
neural plate | 1.24e-08 | 82 |
presumptive neural plate | 1.24e-08 | 82 |
bone element | 8.25e-08 | 82 |
pre-chordal neural plate | 3.74e-07 | 61 |