FFCP PHASE1:Hg19::chr15:68115672..68115691,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=390598 | |EntrezGene=390598 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21326 | |HGNC=21326 | ||
|TSSclassifier=strong | |||
|UniProt=G3V3E1 | |UniProt=G3V3E1 | ||
|association_with_transcript=-203bp_to_ENST00000554240_5end | |association_with_transcript=-203bp_to_ENST00000554240_5end | ||
|cluster_id=chr15:68115672..68115691,+ | |||
|description=CAGE_peak_1_at_SKOR1_5end | |description=CAGE_peak_1_at_SKOR1_5end | ||
|id=chr15:68115672..68115691,+ | |id=chr15:68115672..68115691,+ | ||
|ontology_enrichment_celltype=CL:0000242!7.22e-10!2 | |ontology_enrichment_celltype=CL:0000242!7.22e-10!2 | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.14e-22;2!CL:0000242;1.14e-22;2!CL:0000785;3.85e-12;1!CL:0000819;3.85e-12;1!CL:0000312;1.23e-09;5!CL:0000240;3.57e-08;6!CL:0000311;3.57e-08;6!CL:0000079;3.57e-08;6!CL:0000237;3.57e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.08e-22,2;CL:0000819,4.06e-12,1;CL:0000312,1.20e-09,5;CL:0000240,3.51e-08,6;CL:0000311,3.51e-08,6;CL:0000079,3.51e-08,6;CL:0000237,3.51e-08,6;CL:0000036,3.51e-08,6;CL:0000357,3.51e-08,6;CL:0000114,3.51e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.76e-15;3!CL:0000357;3.57e-08;6!CL:0000114;3.57e-08;6 | |||
|ontology_enrichment_disease=DOID:3119!2.67e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3119;2.53e-12;14!DOID:0060073;3.85e-12;1!DOID:8675;3.85e-12;1!DOID:12603;1.39e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,2.46e-12,14;DOID:0060073,4.06e-12,1;DOID:8675,4.06e-12,1;DOID:12603,1.19e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0003076!1.17e-29!15;UBERON:0003057!1.17e-29!15;UBERON:0002680!1.29e-20!9;UBERON:0001895!1.29e-20!9;UBERON:0010092!1.29e-20!9;UBERON:0004733!6.93e-20!12;UBERON:0002028!6.93e-20!12;UBERON:0007277!6.93e-20!12;UBERON:0004732!2.95e-18!13;UBERON:0002240!1.63e-12!3;UBERON:0000988!7.78e-12!3;UBERON:0002037!3.67e-11!6;UBERON:0006215!3.67e-11!6;UBERON:0001905!3.80e-09!2;UBERON:0002757!3.80e-09!2;UBERON:0010134!3.80e-09!2;UBERON:0002784!3.80e-09!2;UBERON:0005408!3.80e-09!2;UBERON:0001899!3.80e-09!2;UBERON:0001049!1.05e-08!57;UBERON:0005068!1.05e-08!57;UBERON:0006241!1.05e-08!57;UBERON:0007135!1.05e-08!57;UBERON:0002148!1.42e-08!2;UBERON:0009662!1.42e-08!2;UBERON:0001017!2.01e-08!82;UBERON:0000073!6.87e-08!94;UBERON:0001016!6.87e-08!94;UBERON:0005743!6.97e-08!86;UBERON:0002298!8.08e-08!8;UBERON:0005174!1.10e-07!5;UBERON:0001137!1.10e-07!5 | |ontology_enrichment_uberon=UBERON:0003076!1.17e-29!15;UBERON:0003057!1.17e-29!15;UBERON:0002680!1.29e-20!9;UBERON:0001895!1.29e-20!9;UBERON:0010092!1.29e-20!9;UBERON:0004733!6.93e-20!12;UBERON:0002028!6.93e-20!12;UBERON:0007277!6.93e-20!12;UBERON:0004732!2.95e-18!13;UBERON:0002240!1.63e-12!3;UBERON:0000988!7.78e-12!3;UBERON:0002037!3.67e-11!6;UBERON:0006215!3.67e-11!6;UBERON:0001905!3.80e-09!2;UBERON:0002757!3.80e-09!2;UBERON:0010134!3.80e-09!2;UBERON:0002784!3.80e-09!2;UBERON:0005408!3.80e-09!2;UBERON:0001899!3.80e-09!2;UBERON:0001049!1.05e-08!57;UBERON:0005068!1.05e-08!57;UBERON:0006241!1.05e-08!57;UBERON:0007135!1.05e-08!57;UBERON:0002148!1.42e-08!2;UBERON:0009662!1.42e-08!2;UBERON:0001017!2.01e-08!82;UBERON:0000073!6.87e-08!94;UBERON:0001016!6.87e-08!94;UBERON:0005743!6.97e-08!86;UBERON:0002298!8.08e-08!8;UBERON:0005174!1.10e-07!5;UBERON:0001137!1.10e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;5.64e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.74e-08,6;UBERON:0006215,5.74e-08,6 | |||
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| ||
|short_description=p1@SKOR1 | |short_description=p1@SKOR1 | ||
}} | }} |
Latest revision as of 17:56, 18 September 2015
Short description: | p1@SKOR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SKOR1_5end |
Coexpression cluster: | NA |
Association with transcript: | -203bp_to_ENST00000554240_5end |
EntrezGene: | SKOR1 |
HGNC: | 21326 |
UniProt: | G3V3E1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.08e-22 | 2 |
B-1 B cell | 4.06e-12 | 1 |
keratinocyte | 1.20e-09 | 5 |
stratified squamous epithelial cell | 3.51e-08 | 6 |
keratin accumulating cell | 3.51e-08 | 6 |
stratified epithelial cell | 3.51e-08 | 6 |
keratinizing barrier epithelial cell | 3.51e-08 | 6 |
epithelial fate stem cell | 3.51e-08 | 6 |
stratified epithelial stem cell | 3.51e-08 | 6 |
surface ectodermal cell | 3.51e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 5.74e-08 | 6 |
rhombic lip | 5.74e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 2.46e-12 | 14 |
lymphatic system cancer | 4.06e-12 | 1 |
lymphosarcoma | 4.06e-12 | 1 |
acute leukemia | 1.19e-11 | 1 |