FFCP PHASE1:Hg19::chr15:85873285..85873288,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:85873285..85873288,- | |||
|description=CAGE_peak_at_chr15:85873285..85873288,- | |description=CAGE_peak_at_chr15:85873285..85873288,- | ||
|id=chr15:85873285..85873288,- | |id=chr15:85873285..85873288,- | ||
|ontology_enrichment_celltype=CL:0002551!6.58e-08!6;CL:0002320!6.28e-07!365 | |ontology_enrichment_celltype=CL:0002551!6.58e-08!6;CL:0002320!6.28e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000346;1.64e-17;3!CL:1000428;1.64e-17;3!CL:0000946;3.28e-14;1!CL:0000817;3.28e-14;1!CL:0000786;3.28e-14;1!CL:0002559;6.79e-11;5!CL:0000945;1.13e-08;24!CL:0002367;1.59e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,4.26e-18,3;CL:0000346,9.14e-18,3;CL:1000428,9.14e-18,3;CL:0000946,3.08e-14,1;CL:0000786,3.08e-14,1;CL:0000980,3.08e-14,1;CL:0002559,4.79e-11,5;CL:0000945,1.04e-08,24;CL:0000826,1.04e-08,24;CL:0000785,9.25e-08,2;CL:0000955,9.25e-08,2;CL:0000818,9.25e-08,2;CL:0000954,9.25e-08,2;CL:0000816,9.25e-08,2;CL:0002367,2.12e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000954;9.54e-08;2 | |||
|ontology_enrichment_disease=DOID:2531!2.96e-13!51;DOID:0060083!2.96e-13!51;DOID:0050686!1.05e-10!137;DOID:14566!4.40e-10!239;DOID:162!9.34e-10!235;DOID:1240!2.85e-07!39;DOID:0060058!7.97e-07!10 | |ontology_enrichment_disease=DOID:2531!2.96e-13!51;DOID:0060083!2.96e-13!51;DOID:0050686!1.05e-10!137;DOID:14566!4.40e-10!239;DOID:162!9.34e-10!235;DOID:1240!2.85e-07!39;DOID:0060058!7.97e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:2355;9.12e-14;1!DOID:74;1.59e-07;2!DOID:3307;1.59e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,1.10e-13,1;DOID:3307,1.05e-07,2;DOID:74,1.75e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002067!4.50e-09!9;UBERON:0004016!4.50e-09!9;UBERON:0010083!4.50e-09!9;UBERON:0002384!7.68e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.64e-17;3!UBERON:0001992;1.64e-17;3!UBERON:0002073;6.79e-11;5!UBERON:0005969;1.59e-07;2!UBERON:0003956;1.59e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,9.14e-18,3;UBERON:0001992,9.14e-18,3;UBERON:0002073,4.79e-11,5;UBERON:0005086,4.79e-11,5;UBERON:0005969,2.12e-07,2;UBERON:0003956,2.12e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0.369754010166788,0.0774672005803016,1.70603078984906,0,0,0.200544447470142,0,0,0,0,0,0,0.242584061187816,0,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0.632924774881769,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.393419540227666,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0.260118695119756,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0.715471872916026,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0.936480230490962,0.570471821544449,0.597794722207204,0.822041490506354,0.161872944368132,0.702254033511242,0,0.368502951935304,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.206105058476878,0,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,0,1.38134921352481,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0.343143423810856,0,0.862856803274467,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.771048469013278,0.532685175939381,0.492762936082855,0,0.348631135379878,0,0,0,0,0.182091168006717,0,0.451199612907412,0,0,0,0,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0.154048617114644,0,1.10269257987624,0,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0.354761064070598,0.211107635297664,0,0,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0.185803175125719,2.16403819464667,0.426851060090485,0.159426272728822,0.798317485731266,0,0.846694330895531,0,0.280797178113459,0.684704037099577,0,0,0,0.321176150207399,0,0.425846237690326,1.03051603426729,0.307240764308458,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.615424027305347,0,0.179736702294654,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0.476809736941136,0.210998064528027,0.326465616318295,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0.91227394607833,0,0.485560759068186,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0.520679215005393,0,0,0,0.51595809741485,0,0,0,0,0,0,0.548167698587004,0.397429223405979,0,0,0.0801588202515337,0,0.19980960958213,0.288180834308212,0.114536596165916,0,1.29649318189335,0,0,0.67952103036807,0.209205692624666,0.305994652908965,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,1.27009998098677,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0.211200673038813,0.179287339332845,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0.285465333544967,0.235265819698172,0,0,0.298509605773748,0.467426619694449,0,0,0,0,0,0,0.15543720058278,0.443565449968902,0.318593534327405,0,0.621051827505038,0,0,1.04349012362347,0,0.380805212168795,0,0.909243296012797,0,0,0.796191777397232,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0.327609848846413,0.491545817507439,0.211312123358627,0.39997479170986,0.213383459388282,0.688859918643263,0,0.368211900503681,0,0,0,0,0.943595651135378,0.54604819096007,0,0,0.247871528518004,0,0,0.315446980005013,0,0,0.3062454773532,0,0,0,0.205116364240755,0,0,0,0,0,0,0.183428598521679,0.693153996902029,0,0.690359926060101,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99608367645026,0,0.0679697329768317,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0.23248285073625,0.347716544605159,0,0,0,0,0,0.118332000730565,0.511280428554946,0,0,0.31020638566432,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0.357107877211315,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0.106727345877715,1.9307228228694,0.179650404213174,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0.369754010166788,0.0774672005803016,1.70603078984906,0,0,0.200544447470142,0,0,0,0,0,0,0.242584061187816,0,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0.632924774881769,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.393419540227666,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0.260118695119756,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0.715471872916026,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0.936480230490962,0.570471821544449,0.597794722207204,0.822041490506354,0.161872944368132,0.702254033511242,0,0.368502951935304,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.206105058476878,0,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,0,1.38134921352481,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0.343143423810856,0,0.862856803274467,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.771048469013278,0.532685175939381,0.492762936082855,0,0.348631135379878,0,0,0,0,0.182091168006717,0,0.451199612907412,0,0,0,0,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0.154048617114644,0,1.10269257987624,0,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0.354761064070598,0.211107635297664,0,0,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0.185803175125719,2.16403819464667,0.426851060090485,0.159426272728822,0.798317485731266,0,0.846694330895531,0,0.280797178113459,0.684704037099577,0,0,0,0.321176150207399,0,0.425846237690326,1.03051603426729,0.307240764308458,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.615424027305347,0,0.179736702294654,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0.476809736941136,0.210998064528027,0.326465616318295,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0.91227394607833,0,0.485560759068186,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0.520679215005393,0,0,0,0.51595809741485,0,0,0,0,0,0,0.548167698587004,0.397429223405979,0,0,0.0801588202515337,0,0.19980960958213,0.288180834308212,0.114536596165916,0,1.29649318189335,0,0,0.67952103036807,0.209205692624666,0.305994652908965,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,1.27009998098677,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0.211200673038813,0.179287339332845,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0.285465333544967,0.235265819698172,0,0,0.298509605773748,0.467426619694449,0,0,0,0,0,0,0.15543720058278,0.443565449968902,0.318593534327405,0,0.621051827505038,0,0,1.04349012362347,0,0.380805212168795,0,0.909243296012797,0,0,0.796191777397232,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0.327609848846413,0.491545817507439,0.211312123358627,0.39997479170986,0.213383459388282,0.688859918643263,0,0.368211900503681,0,0,0,0,0.943595651135378,0.54604819096007,0,0,0.247871528518004,0,0,0.315446980005013,0,0,0.3062454773532,0,0,0,0.205116364240755,0,0,0,0,0,0,0.183428598521679,0.693153996902029,0,0.690359926060101,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99608367645026,0,0.0679697329768317,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0.23248285073625,0.347716544605159,0,0,0,0,0,0.118332000730565,0.511280428554946,0,0,0.31020638566432,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0.357107877211315,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0.106727345877715,1.9307228228694,0.179650404213174,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr15:85873285..85873288,- | |short_description=p@chr15:85873285..85873288,- | ||
}} | }} |
Latest revision as of 05:04, 25 July 2015
Short description: | p@chr15:85873285..85873288, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:85873285..85873288, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 4.26e-18 | 3 |
hair follicle dermal papilla cell | 9.14e-18 | 3 |
stem cell of epidermis | 9.14e-18 | 3 |
antibody secreting cell | 3.08e-14 | 1 |
plasma cell | 3.08e-14 | 1 |
plasmablast | 3.08e-14 | 1 |
hair follicle cell | 4.79e-11 | 5 |
lymphocyte of B lineage | 1.04e-08 | 24 |
pro-B cell | 1.04e-08 | 24 |
mature B cell | 9.25e-08 | 2 |
pre-B-II cell | 9.25e-08 | 2 |
transitional stage B cell | 9.25e-08 | 2 |
small pre-B-II cell | 9.25e-08 | 2 |
immature B cell | 9.25e-08 | 2 |
trabecular meshwork cell | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 9.14e-18 | 3 |
papillary layer of dermis | 9.14e-18 | 3 |
hair follicle | 4.79e-11 | 5 |
hair follicle placode | 4.79e-11 | 5 |
reticulum trabeculare | 2.12e-07 | 2 |
aqueous drainage system | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.10e-13 | 1 |
teratoma | 1.05e-07 | 2 |
hematopoietic system disease | 1.75e-07 | 2 |