FFCP PHASE1:Hg19::chr11:62369229..62369289,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:62369229..62369289,-
|short_description=p2@MTA2
|description=CAGE_peak_2_at_MTA2_5end
|association_with_transcript=13bp_to_uc001ntq.1_5end
|EntrezGene=92...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9219 | |EntrezGene=9219 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7411 | |HGNC=7411 | ||
|TSSclassifier=strong | |||
|UniProt=O94776 | |UniProt=O94776 | ||
|association_with_transcript=13bp_to_uc001ntq.1_5end | |||
|cluster_id=chr11:62369229..62369289,- | |||
|description=CAGE_peak_2_at_MTA2_5end | |||
|id=chr11:62369229..62369289,- | |||
|ontology_enrichment_celltype=CL:0000003!1.34e-14!722;CL:0000115!9.19e-14!35;CL:0000066!1.99e-12!254;CL:0002078!4.86e-12!44;CL:0000076!7.00e-12!62;CL:0002139!2.20e-11!24;CL:0000542!3.31e-11!53;CL:0000051!3.31e-11!53;CL:0000838!8.99e-11!52;CL:0000071!1.67e-10!18;CL:0002546!1.67e-10!18;CL:0000012!4.77e-10!682;CL:0000548!1.09e-09!679;CL:0000004!1.09e-09!679;CL:0000255!1.09e-09!679;CL:0000213!5.23e-09!57;CL:0000215!5.23e-09!57;CL:0000084!5.56e-09!25;CL:0000827!5.56e-09!25;CL:0000063!4.26e-08!578;CL:0000791!4.50e-08!18;CL:0000789!4.50e-08!18;CL:0002420!4.50e-08!18;CL:0002419!4.50e-08!18;CL:0000790!4.50e-08!18;CL:0000220!9.67e-08!246;CL:0002321!1.03e-07!248;CL:0002371!3.07e-07!591;CL:0000144!8.27e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000115;5.50e-12;36!CL:0002139;2.12e-11;24!CL:0000071;1.75e-10;18!CL:0000084;5.37e-09;25!CL:0000791;5.27e-08;18!CL:0000789;5.27e-08;18!CL:0002419;5.27e-08;18!CL:0002078;6.03e-08;45!CL:1000449;7.86e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.49e-14,36;CL:0000066,1.34e-12,253;CL:0002078,1.45e-12,45;CL:0002139,2.20e-11,24;CL:0000542,3.31e-11,53;CL:0000051,3.31e-11,53;CL:0000076,3.47e-11,63;CL:0000838,8.99e-11,52;CL:0000071,1.67e-10,18;CL:0002546,1.67e-10,18;CL:0000213,1.89e-09,58;CL:0000215,1.89e-09,58;CL:0000084,5.56e-09,25;CL:0000827,5.56e-09,25;CL:0000791,4.50e-08,18;CL:0000789,4.50e-08,18;CL:0002420,4.50e-08,18;CL:0002419,4.50e-08,18;CL:0000790,4.50e-08,18;CL:0002321,7.56e-08,250;CL:1000449,7.41e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;1.75e-10;18!CL:0000790;5.27e-08;18 | |||
|ontology_enrichment_disease=DOID:1240!3.01e-12!39;DOID:2531!7.77e-12!51;DOID:0060083!7.77e-12!51;DOID:8692!1.01e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;6.12e-10;39!DOID:8692;2.26e-09;31!DOID:2531;7.20e-08;51!DOID:0060083;7.20e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.01e-12,39;DOID:2531,7.77e-12,51;DOID:0060083,7.77e-12,51;DOID:8692,1.01e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0001986!1.67e-10!18;UBERON:0004638!1.67e-10!18;UBERON:0004852!1.67e-10!18;UBERON:0000487!2.85e-10!22;UBERON:0006914!9.51e-08!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.75e-10;18!UBERON:0001986;1.75e-10;18!UBERON:0004852;1.75e-10;18!UBERON:0000487;2.88e-10;22!UBERON:0000490;1.56e-08;33!UBERON:0006914;8.98e-08;25!UBERON:0006555;7.86e-07;15!UBERON:0004819;7.86e-07;15!UBERON:0001285;7.86e-07;15!UBERON:0007684;7.86e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.67e-10,18;UBERON:0001986,1.67e-10,18;UBERON:0004852,1.67e-10,18;UBERON:0000487,2.85e-10,22;UBERON:0006914,9.51e-08,25;UBERON:0004211,7.41e-07,15;UBERON:0009773,7.41e-07,15;UBERON:0001231,7.41e-07,15;UBERON:0001285,7.41e-07,15;UBERON:0007684,7.41e-07,15;UBERON:0004208,7.41e-07,15 | |||
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|short_description=p2@MTA2 | |||
}} | }} |
Latest revision as of 20:00, 18 September 2015
Short description: | p2@MTA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MTA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_uc001ntq.1_5end |
EntrezGene: | MTA2 |
HGNC: | 7411 |
UniProt: | O94776 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.49e-14 | 36 |
epithelial cell | 1.34e-12 | 253 |
meso-epithelial cell | 1.45e-12 | 45 |
endothelial cell of vascular tree | 2.20e-11 | 24 |
lymphocyte | 3.31e-11 | 53 |
common lymphoid progenitor | 3.31e-11 | 53 |
squamous epithelial cell | 3.47e-11 | 63 |
lymphoid lineage restricted progenitor cell | 8.99e-11 | 52 |
blood vessel endothelial cell | 1.67e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.67e-10 | 18 |
lining cell | 1.89e-09 | 58 |
barrier cell | 1.89e-09 | 58 |
T cell | 5.56e-09 | 25 |
pro-T cell | 5.56e-09 | 25 |
mature alpha-beta T cell | 4.50e-08 | 18 |
alpha-beta T cell | 4.50e-08 | 18 |
immature T cell | 4.50e-08 | 18 |
mature T cell | 4.50e-08 | 18 |
immature alpha-beta T cell | 4.50e-08 | 18 |
embryonic cell | 7.56e-08 | 250 |
epithelial cell of nephron | 7.41e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.67e-10 | 18 |
endothelium | 1.67e-10 | 18 |
cardiovascular system endothelium | 1.67e-10 | 18 |
simple squamous epithelium | 2.85e-10 | 22 |
squamous epithelium | 9.51e-08 | 25 |
nephron epithelium | 7.41e-07 | 15 |
renal tubule | 7.41e-07 | 15 |
nephron tubule | 7.41e-07 | 15 |
nephron | 7.41e-07 | 15 |
uriniferous tubule | 7.41e-07 | 15 |
nephrogenic mesenchyme | 7.41e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.01e-12 | 39 |
hematologic cancer | 7.77e-12 | 51 |
immune system cancer | 7.77e-12 | 51 |
myeloid leukemia | 1.01e-09 | 31 |