FFCP PHASE1:Hg19::chr11:62370516..62370535,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:62370516..62370535,-
|short_description=p@chr11:62370516..62370535,-
|description=CAGE_peak_at_chr11:62370516..62370535,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:62370516..62370535,- | |||
|coexpression_cluster_id=C360 | |||
|description=CAGE_peak_at_chr11:62370516..62370535,- | |||
|id=chr11:62370516..62370535,- | |||
|ontology_enrichment_celltype=CL:0002076!3.39e-13!43;CL:0002368!2.69e-09!13;CL:0000223!1.13e-08!59;CL:0000066!1.61e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.21e-24;19!CL:0002577;9.40e-14;3!CL:0002541;3.54e-12;3!CL:0002536;1.85e-09;2!CL:0000575;1.21e-08;2!CL:0002537;3.17e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.22e-24,19;CL:0002577,9.41e-14,3;CL:0002541,5.53e-12,3;CL:0002536,1.81e-09,2;CL:0000575,1.24e-08,2;CL:0002537,3.25e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;9.37e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.08e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0005631!7.83e-16!14;UBERON:0000158!7.83e-16!14;UBERON:0004119!1.19e-12!169;UBERON:0000925!1.19e-12!169;UBERON:0006595!1.19e-12!169;UBERON:0003124!1.56e-11!7;UBERON:0000478!3.36e-09!24;UBERON:0000077!4.04e-09!130;UBERON:0004175!5.21e-09!25;UBERON:0001004!6.99e-09!72;UBERON:0004921!7.27e-09!129;UBERON:0004185!7.27e-09!129;UBERON:0001007!9.82e-09!155;UBERON:0001555!9.82e-09!155;UBERON:0007026!9.82e-09!155;UBERON:0000064!1.84e-08!219;UBERON:0000065!1.91e-08!53;UBERON:0005795!7.94e-08!22;UBERON:0003975!9.25e-08!22;UBERON:0005156!1.07e-07!59;UBERON:0000990!1.07e-07!59;UBERON:0001987!1.62e-07!4;UBERON:0004340!1.62e-07!4;UBERON:0005178!2.60e-07!34;UBERON:0002224!2.60e-07!34;UBERON:0003133!5.40e-07!48;UBERON:0005181!5.53e-07!35;UBERON:0000995!6.52e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.45e-25;10!UBERON:0000158;5.45e-25;10!UBERON:0000478;3.44e-22;24!UBERON:0000305;4.99e-15;7!UBERON:0003124;3.54e-12;3!UBERON:0000920;3.54e-12;3!UBERON:0000002;8.41e-11;6!UBERON:0001560;8.41e-11;6!UBERON:0001987;2.05e-10;4!UBERON:0006562;7.27e-09;2!UBERON:0004921;1.56e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.41e-33,14;UBERON:0000158,1.41e-33,14;UBERON:0000478,4.34e-22,24;UBERON:0003124,1.95e-20,7;UBERON:0000305,5.07e-15,7;UBERON:0004871,4.23e-13,8;UBERON:0000920,5.53e-12,3;UBERON:0000002,9.10e-11,6;UBERON:0001560,9.10e-11,6;UBERON:0005795,1.63e-10,22;UBERON:0001987,2.05e-10,4;UBERON:0004340,2.05e-10,4;UBERON:0004175,4.28e-09,25;UBERON:0004923,4.88e-09,66;UBERON:0000995,1.15e-08,21;UBERON:0003975,3.17e-08,22 | |||
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| ||
|short_description=p@chr11:62370516..62370535,- | |||
}} | }} |
Latest revision as of 23:44, 23 July 2015
Short description: | p@chr11:62370516..62370535, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:62370516..62370535, - |
Coexpression cluster: | C360_Placental_Amniotic_amniotic_teratocarcinoma_chorionic_neuroblastoma_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.22e-24 | 19 |
placental epithelial cell | 9.41e-14 | 3 |
chorionic membrane mesenchymal stem cell | 5.53e-12 | 3 |
amniotic epithelial cell | 1.81e-09 | 2 |
corneal epithelial cell | 1.24e-08 | 2 |
amnion mesenchymal stem cell | 3.25e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.41e-33 | 14 |
membranous layer | 1.41e-33 | 14 |
extraembryonic structure | 4.34e-22 | 24 |
chorion | 1.95e-20 | 7 |
amnion | 5.07e-15 | 7 |
somatic layer of lateral plate mesoderm | 4.23e-13 | 8 |
egg chorion | 5.53e-12 | 3 |
uterine cervix | 9.10e-11 | 6 |
neck of organ | 9.10e-11 | 6 |
embryonic uterus | 1.63e-10 | 22 |
placenta | 2.05e-10 | 4 |
allantois | 2.05e-10 | 4 |
internal genitalia | 4.28e-09 | 25 |
organ component layer | 4.88e-09 | 66 |
uterus | 1.15e-08 | 21 |
internal female genitalia | 3.17e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.08e-07 | 5 |