FFCP PHASE1:Hg19::chr16:15736897..15736928,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9665 | |EntrezGene=9665 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29562 | |HGNC=29562 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_ENST00000540441_5end | |association_with_transcript=-16bp_to_ENST00000540441_5end | ||
|cluster_id=chr16:15736897..15736928,- | |||
|coexpression_cluster_id=C3227 | |||
|description=CAGE_peak_2_at_KIAA0430_5end | |description=CAGE_peak_2_at_KIAA0430_5end | ||
|id=chr16:15736897..15736928,- | |id=chr16:15736897..15736928,- | ||
|ontology_enrichment_celltype=CL:0000542!5.11e-10!53;CL:0000051!5.11e-10!53;CL:0000838!6.05e-10!52;CL:0000791!1.42e-08!18;CL:0000789!1.42e-08!18;CL:0002420!1.42e-08!18;CL:0002419!1.42e-08!18;CL:0000790!1.42e-08!18;CL:0000738!3.03e-08!140;CL:0002087!1.20e-07!119;CL:0002031!3.91e-07!124;CL:0000037!6.56e-07!172;CL:0000566!6.56e-07!172;CL:0002032!7.05e-07!165;CL:0000837!7.05e-07!165 | |ontology_enrichment_celltype=CL:0000542!5.11e-10!53;CL:0000051!5.11e-10!53;CL:0000838!6.05e-10!52;CL:0000791!1.42e-08!18;CL:0000789!1.42e-08!18;CL:0002420!1.42e-08!18;CL:0002419!1.42e-08!18;CL:0000790!1.42e-08!18;CL:0000738!3.03e-08!140;CL:0002087!1.20e-07!119;CL:0002031!3.91e-07!124;CL:0000037!6.56e-07!172;CL:0000566!6.56e-07!172;CL:0002032!7.05e-07!165;CL:0000837!7.05e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.88e-09;18!CL:0000789;1.88e-09;18!CL:0002419;1.88e-09;18!CL:0000084;5.17e-07;25!CL:0000542;9.47e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,9.32e-10,53;CL:0000051,9.32e-10,53;CL:0000838,1.15e-09,52;CL:0000791,1.45e-09,18;CL:0000789,1.45e-09,18;CL:0002420,1.45e-09,18;CL:0002419,1.45e-09,18;CL:0000790,1.45e-09,18;CL:0000738,4.64e-07,136;CL:0000084,5.86e-07,25;CL:0000827,5.86e-07,25;CL:0002087,5.93e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;1.88e-09;18!CL:0000051;9.47e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.19e-22!115;UBERON:0000178!1.57e-08!15;UBERON:0000179!1.57e-08!15;UBERON:0000463!1.57e-08!15;UBERON:0001049!3.24e-07!57;UBERON:0005068!3.24e-07!57;UBERON:0006241!3.24e-07!57;UBERON:0007135!3.24e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.63e-09;15!UBERON:0000179;2.63e-09;15!UBERON:0000463;2.63e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.95e-23,114;UBERON:0000178,1.62e-09,15;UBERON:0000179,1.62e-09,15;UBERON:0000463,1.62e-09,15;UBERON:0001049,9.57e-08,56;UBERON:0005068,9.57e-08,56;UBERON:0006241,9.57e-08,56;UBERON:0007135,9.57e-08,56;UBERON:0000073,5.14e-07,53;UBERON:0002616,5.14e-07,53 | |||
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| ||
|short_description=p2@KIAA0430 | |short_description=p2@KIAA0430 | ||
}} | }} |
Latest revision as of 18:53, 24 September 2015
Short description: | p2@KIAA0430 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KIAA0430_5end |
Coexpression cluster: | C3227_Neutrophils_Whole_Reticulocytes_blood_Eosinophils_CD4_CD19 |
Association with transcript: | -16bp_to_ENST00000540441_5end |
EntrezGene: | KIAA0430 |
HGNC: | 29562 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 9.32e-10 | 53 |
common lymphoid progenitor | 9.32e-10 | 53 |
lymphoid lineage restricted progenitor cell | 1.15e-09 | 52 |
mature alpha-beta T cell | 1.45e-09 | 18 |
alpha-beta T cell | 1.45e-09 | 18 |
immature T cell | 1.45e-09 | 18 |
mature T cell | 1.45e-09 | 18 |
immature alpha-beta T cell | 1.45e-09 | 18 |
leukocyte | 4.64e-07 | 136 |
T cell | 5.86e-07 | 25 |
pro-T cell | 5.86e-07 | 25 |
nongranular leukocyte | 5.93e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.95e-23 | 114 |
blood | 1.62e-09 | 15 |
haemolymphatic fluid | 1.62e-09 | 15 |
organism substance | 1.62e-09 | 15 |
neural tube | 9.57e-08 | 56 |
neural rod | 9.57e-08 | 56 |
future spinal cord | 9.57e-08 | 56 |
neural keel | 9.57e-08 | 56 |
regional part of nervous system | 5.14e-07 | 53 |
regional part of brain | 5.14e-07 | 53 |