FFCP PHASE1:Hg19::chr1:39794062..39794114,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23499 | |EntrezGene=23499 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13664 | |HGNC=13664 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_ENST00000528611_5end | |association_with_transcript=21bp_to_ENST00000528611_5end | ||
|cluster_id=chr1:39794062..39794114,+ | |||
|coexpression_cluster_id=C46 | |||
|description=CAGE_peak_14_at_MACF1_5end | |description=CAGE_peak_14_at_MACF1_5end | ||
|id=chr1:39794062..39794114,+ | |id=chr1:39794062..39794114,+ | ||
|ontology_enrichment_celltype=CL:0000791!3.07e-17!18;CL:0000789!3.07e-17!18;CL:0002420!3.07e-17!18;CL:0002419!3.07e-17!18;CL:0000790!3.07e-17!18;CL:0000084!3.67e-16!25;CL:0000827!3.67e-16!25;CL:0000625!3.82e-14!11;CL:0000542!3.80e-07!53;CL:0000051!3.80e-07!53;CL:0000838!8.64e-07!52 | |ontology_enrichment_celltype=CL:0000791!3.07e-17!18;CL:0000789!3.07e-17!18;CL:0002420!3.07e-17!18;CL:0002419!3.07e-17!18;CL:0000790!3.07e-17!18;CL:0000084!3.67e-16!25;CL:0000827!3.67e-16!25;CL:0000625!3.82e-14!11;CL:0000542!3.80e-07!53;CL:0000051!3.80e-07!53;CL:0000838!8.64e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000084;4.60e-32;25!CL:0000791;2.39e-31;18!CL:0000789;2.39e-31;18!CL:0002419;2.39e-31;18!CL:0000625;4.31e-30;11!CL:0000623;7.36e-10;3!CL:0000542;1.21e-09;53!CL:0000226;1.02e-08;3!CL:0000842;1.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,3.62e-32,25;CL:0000827,3.62e-32,25;CL:0000791,1.71e-31,18;CL:0000789,1.71e-31,18;CL:0002420,1.71e-31,18;CL:0002419,1.71e-31,18;CL:0000790,1.71e-31,18;CL:0000625,3.95e-30,11;CL:0000838,1.53e-18,52;CL:0000542,4.42e-18,53;CL:0000051,4.42e-18,53;CL:0002087,4.14e-12,115;CL:0000738,8.08e-12,136;CL:0000623,7.38e-10,3;CL:0000825,7.38e-10,3;CL:0000226,1.31e-08,3;CL:0000842,1.31e-08,3;CL:0002031,1.61e-08,120;CL:0000037,4.34e-08,168;CL:0000988,2.65e-07,177;CL:0000624,8.33e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;2.39e-31;18!CL:0000051;1.21e-09;53!UBERON:0007297;9.08e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.39e-27!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.75e-13;15!UBERON:0000179;6.75e-13;15!UBERON:0000463;6.75e-13;15!UBERON:0006947;2.00e-09;3!UBERON:0004054;2.00e-09;3!UBERON:0005904;3.83e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.92e-13,15;UBERON:0000179,8.92e-13,15;UBERON:0000463,8.92e-13,15;UBERON:0007023,1.75e-10,114;UBERON:0006947,1.92e-09,3;UBERON:0004054,1.92e-09,3;UBERON:0005904,3.72e-07,4 | |||
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| ||
|short_description=p14@MACF1 | |short_description=p14@MACF1 | ||
}} | }} |
Latest revision as of 23:43, 17 September 2015
Short description: | p14@MACF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_MACF1_5end |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | 21bp_to_ENST00000528611_5end |
EntrezGene: | MACF1 |
HGNC: | 13664 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 3.62e-32 | 25 |
pro-T cell | 3.62e-32 | 25 |
mature alpha-beta T cell | 1.71e-31 | 18 |
alpha-beta T cell | 1.71e-31 | 18 |
immature T cell | 1.71e-31 | 18 |
mature T cell | 1.71e-31 | 18 |
immature alpha-beta T cell | 1.71e-31 | 18 |
CD8-positive, alpha-beta T cell | 3.95e-30 | 11 |
lymphoid lineage restricted progenitor cell | 1.53e-18 | 52 |
lymphocyte | 4.42e-18 | 53 |
common lymphoid progenitor | 4.42e-18 | 53 |
nongranular leukocyte | 4.14e-12 | 115 |
leukocyte | 8.08e-12 | 136 |
natural killer cell | 7.38e-10 | 3 |
pro-NK cell | 7.38e-10 | 3 |
single nucleate cell | 1.31e-08 | 3 |
mononuclear cell | 1.31e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 1.61e-08 | 120 |
hematopoietic stem cell | 4.34e-08 | 168 |
hematopoietic cell | 2.65e-07 | 177 |
CD4-positive, alpha-beta T cell | 8.33e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 8.92e-13 | 15 |
haemolymphatic fluid | 8.92e-13 | 15 |
organism substance | 8.92e-13 | 15 |
adult organism | 1.75e-10 | 114 |
male genital duct | 1.92e-09 | 3 |
internal male genitalia | 1.92e-09 | 3 |
duct of male reproductive system | 3.72e-07 | 4 |