FFCP PHASE1:Hg19::chr11:64004888..64004909,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:64004888..64004909,+
|short_description=p3@VEGFB
|description=CAGE_peak_3_at_VEGFB_5end
|association_with_transcript=-98bp_to_ENST00000541681_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7423 | |EntrezGene=7423 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12681 | |HGNC=12681 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-98bp_to_ENST00000541681_5end | |||
|cluster_id=chr11:64004888..64004909,+ | |||
|coexpression_cluster_id=C3183 | |||
|description=CAGE_peak_3_at_VEGFB_5end | |||
|id=chr11:64004888..64004909,+ | |||
|ontology_enrichment_celltype=CL:0000325!2.04e-08!39 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.24e-13;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,7.73e-13,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;4.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003513,3.99e-07,7 | |||
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| ||
|short_description=p3@VEGFB | |||
}} | }} |
Latest revision as of 01:49, 19 September 2015
Short description: | p3@VEGFB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VEGFB_5end |
Coexpression cluster: | C3183_Osteoblast_breast_Mesenchymal_Melanocyte_Fibroblast_left_Adipocyte |
Association with transcript: | -98bp_to_ENST00000541681_5end |
EntrezGene: | VEGFB |
HGNC: | 12681 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 7.73e-13 | 15 |
Ontology term | p-value | n |
---|---|---|
trunk blood vessel | 3.99e-07 | 7 |