FFCP PHASE1:Hg19::chr11:64052579..64052597,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:64052579..64052597,-
|short_description=p5@BAD
|description=CAGE_peak_5_at_BAD_5end
|association_with_transcript=-403bp_to_ENST00000544271,NM_004322,NM_03...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=572 | |EntrezGene=572 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=936 | |HGNC=936 | ||
|UniProt=Q6FH21, | |TSSclassifier=strong | ||
|UniProt=Q6FH21,Q92934 | |||
|association_with_transcript=-403bp_to_ENST00000544271,NM_004322,NM_032989,uc001nzc.2,uc001nzd.2,uc009ypk.2_5end | |||
|cluster_id=chr11:64052579..64052597,- | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_5_at_BAD_5end | |||
|id=chr11:64052579..64052597,- | |||
|ontology_enrichment_celltype=CL:0000738!4.36e-40!140;CL:0000988!9.71e-30!182;CL:0000037!1.24e-29!172;CL:0000566!1.24e-29!172;CL:0002031!3.24e-28!124;CL:0002087!2.34e-27!119;CL:0002032!6.85e-26!165;CL:0000837!6.85e-26!165;CL:0000542!6.33e-18!53;CL:0000051!6.33e-18!53;CL:0000838!5.18e-17!52;CL:0000766!1.08e-16!76;CL:0002057!5.47e-14!42;CL:0000860!1.38e-12!45;CL:0000557!3.25e-12!71;CL:0002009!1.18e-10!65;CL:0000624!1.55e-10!6;CL:0000839!1.69e-10!70;CL:0000763!3.70e-10!112;CL:0000049!3.70e-10!112;CL:0000094!4.67e-10!8;CL:0000791!1.24e-09!18;CL:0000789!1.24e-09!18;CL:0002420!1.24e-09!18;CL:0002419!1.24e-09!18;CL:0000790!1.24e-09!18;CL:0002194!2.93e-09!63;CL:0000576!2.93e-09!63;CL:0000040!2.93e-09!63;CL:0000559!2.93e-09!63;CL:0002320!4.23e-09!365;CL:0000134!8.84e-09!358;CL:0000081!9.01e-09!11;CL:0000084!2.05e-08!25;CL:0000827!2.05e-08!25;CL:0000945!9.64e-07!24;CL:0000826!9.64e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000624;4.45e-23;6!CL:0000791;4.78e-19;18!CL:0000789;4.78e-19;18!CL:0002419;4.78e-19;18!CL:0000623;1.33e-18;3!CL:0000094;2.66e-17;8!CL:0000767;5.67e-17;3!CL:0000542;2.24e-14;53!CL:0000084;2.24e-13;25!CL:0000081;1.57e-12;11!CL:0000236;8.30e-11;13!CL:0000097;1.58e-10;5!CL:0002393;7.50e-09;6!CL:0002397;7.50e-09;6!CL:0000898;4.68e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.85e-29,136;CL:0000838,8.68e-25,52;CL:0000542,2.97e-24,53;CL:0000051,2.97e-24,53;CL:0000037,3.52e-24,168;CL:0000624,4.16e-23,6;CL:0000988,1.18e-22,177;CL:0002032,1.10e-21,161;CL:0000837,1.10e-21,161;CL:0002031,8.37e-20,120;CL:0000791,4.55e-19,18;CL:0000789,4.55e-19,18;CL:0002420,4.55e-19,18;CL:0002419,4.55e-19,18;CL:0000790,4.55e-19,18;CL:0000623,1.45e-18,3;CL:0000825,1.45e-18,3;CL:0000094,1.92e-17,8;CL:0000767,4.18e-17,3;CL:0002087,2.66e-15,115;CL:0000084,2.17e-13,25;CL:0000827,2.17e-13,25;CL:0000081,1.24e-12,11;CL:0000097,1.90e-10,5;CL:0002028,1.90e-10,5;CL:0000236,4.65e-10,14;CL:0000134,3.49e-09,354;CL:0002320,6.92e-09,361;CL:0000898,4.86e-08,3;CL:0000219,7.77e-08,386;CL:0000766,3.95e-07,72;CL:0000034,7.51e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000790;4.78e-19;18!CL:0000051;2.24e-14;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.06e-11!102;UBERON:0003061!1.06e-11!102;UBERON:0002371!8.04e-11!80;UBERON:0002193!2.26e-10!112;UBERON:0001474!1.85e-09!86;UBERON:0002384!3.99e-09!375;UBERON:0004765!3.96e-08!101;UBERON:0001434!3.96e-08!101;UBERON:0002405!3.59e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.77e-08,371 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0.236132343941038,3.54027849164014,1.91914699048606,1.70297735647684,0,0,0,0,0,1.17440175733939,1.66198622559563,2.80762226458198,3.25516306073778,0,0,0,0.145398238779565,0,0.485168122375632,0.464858073811369,0,0.309706370895104,0,0,0.709446689665756,0,0,0,0.188242339542605,0,0.898893937780338,0,0,0.639337125799041,0.329851300186716,0.199463657621632,0,0,0,0.622822248995575,0,0.521482918420201,0.217188844705117,0.605399502633369,0.368277635987565,0.632924774881769,0.211255286311942,0,0.628975936525128,0.112328631146495,0,0.48217676009124,0.285012743741249,0,0,0,0.546138611262131,0,1.70692089026603,0,0,0,2.86216126360609,5.69212969109448,5.87237189370939,8.02773779062981,2.64342657158052,0,0.263384084775077,2.75393678159366,9.43225830597995,3.90642848099067,0,0.977766799900771,1.89379122293893,3.89653456815823,0.222820913770347,1.76763544484902,0.664601683750863,0.270803863765016,0.384273959177026,0.390178042679635,0,0,0,0.444859689486181,0,0,0,1.14966148080576,2.74901956386104,1.51811815211702,0,0,0,0.451725357233318,0,0,0,0.821127996921047,4.43534835094411,10.6976078313403,6.66192257860875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0.790204397959275,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,1.4512968087854,3.02651902175619,2.65109110195398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.51686128565396,14.6626750904472,15.2728213172901,0,0,0,0,0,0.749007023947182,5.9832291840805,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,4.09856981555372,0.533637789017222,0.909382714338778,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0.66343897524122,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0.222886768554957,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.638002319463839,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0.195551382734803,0.0801588202515337,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0.2249738915515,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0.194860308839388,0,0,0,0,0,0.19998739585493,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0.227662191351298,0,0.460935950223117,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0.236132343941038,3.54027849164014,1.91914699048606,1.70297735647684,0,0,0,0,0,1.17440175733939,1.66198622559563,2.80762226458198,3.25516306073778,0,0,0,0.145398238779565,0,0.485168122375632,0.464858073811369,0,0.309706370895104,0,0,0.709446689665756,0,0,0,0.188242339542605,0,0.898893937780338,0,0,0.639337125799041,0.329851300186716,0.199463657621632,0,0,0,0.622822248995575,0,0.521482918420201,0.217188844705117,0.605399502633369,0.368277635987565,0.632924774881769,0.211255286311942,0,0.628975936525128,0.112328631146495,0,0.48217676009124,0.285012743741249,0,0,0,0.546138611262131,0,1.70692089026603,0,0,0,2.86216126360609,5.69212969109448,5.87237189370939,8.02773779062981,2.64342657158052,0,0.263384084775077,2.75393678159366,9.43225830597995,3.90642848099067,0,0.977766799900771,1.89379122293893,3.89653456815823,0.222820913770347,1.76763544484902,0.664601683750863,0.270803863765016,0.384273959177026,0.390178042679635,0,0,0,0.444859689486181,0,0,0,1.14966148080576,2.74901956386104,1.51811815211702,0,0,0,0.451725357233318,0,0,0,0.821127996921047,4.43534835094411,10.6976078313403,6.66192257860875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0.790204397959275,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,1.4512968087854,3.02651902175619,2.65109110195398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.51686128565396,14.6626750904472,15.2728213172901,0,0,0,0,0,0.749007023947182,5.9832291840805,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,4.09856981555372,0.533637789017222,0.909382714338778,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0.66343897524122,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0.222886768554957,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.638002319463839,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0.195551382734803,0.0801588202515337,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0.2249738915515,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0.194860308839388,0,0,0,0,0,0.19998739585493,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0.227662191351298,0,0.460935950223117,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p5@BAD | |||
}} | }} |
Latest revision as of 02:29, 19 September 2015
Short description: | p5@BAD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BAD_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | -403bp_to_ENST00000544271, NM_004322, NM_032989, uc001nzc.2, uc001nzd.2, uc009ypk.2_5end |
EntrezGene: | BAD |
HGNC: | 936 |
UniProt: | Q6FH21Q92934 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.85e-29 | 136 |
lymphoid lineage restricted progenitor cell | 8.68e-25 | 52 |
lymphocyte | 2.97e-24 | 53 |
common lymphoid progenitor | 2.97e-24 | 53 |
hematopoietic stem cell | 3.52e-24 | 168 |
CD4-positive, alpha-beta T cell | 4.16e-23 | 6 |
hematopoietic cell | 1.18e-22 | 177 |
hematopoietic oligopotent progenitor cell | 1.10e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.10e-21 | 161 |
hematopoietic lineage restricted progenitor cell | 8.37e-20 | 120 |
mature alpha-beta T cell | 4.55e-19 | 18 |
alpha-beta T cell | 4.55e-19 | 18 |
immature T cell | 4.55e-19 | 18 |
mature T cell | 4.55e-19 | 18 |
immature alpha-beta T cell | 4.55e-19 | 18 |
natural killer cell | 1.45e-18 | 3 |
pro-NK cell | 1.45e-18 | 3 |
granulocyte | 1.92e-17 | 8 |
basophil | 4.18e-17 | 3 |
nongranular leukocyte | 2.66e-15 | 115 |
T cell | 2.17e-13 | 25 |
pro-T cell | 2.17e-13 | 25 |
blood cell | 1.24e-12 | 11 |
mast cell | 1.90e-10 | 5 |
basophil mast progenitor cell | 1.90e-10 | 5 |
B cell | 4.65e-10 | 14 |
mesenchymal cell | 3.49e-09 | 354 |
connective tissue cell | 6.92e-09 | 361 |
naive T cell | 4.86e-08 | 3 |
motile cell | 7.77e-08 | 386 |
myeloid leukocyte | 3.95e-07 | 72 |
stem cell | 7.51e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.77e-08 | 371 |