FFCP PHASE1:Hg19::chr11:66083335..66083379,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:66083335..66083379,+
|short_description=p@chr11:66083335..66083379,+
|description=CAGE_peak_at_chr11:66083335..66083379,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:66083335..66083379,+ | |||
|coexpression_cluster_id=C563 | |||
|description=CAGE_peak_at_chr11:66083335..66083379,+ | |||
|id=chr11:66083335..66083379,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.37e-36!180;CL:0000057!2.33e-31!75;CL:0000183!5.25e-19!59;CL:0000187!1.16e-18!54;CL:0000680!8.41e-18!57;CL:0000056!8.41e-18!57;CL:0000355!8.41e-18!57;CL:0000393!3.79e-15!60;CL:0000211!3.79e-15!60;CL:0000192!1.09e-14!42;CL:0000514!1.09e-14!42;CL:0002620!1.78e-14!23;CL:0000048!2.86e-14!430;CL:0000723!1.08e-13!436;CL:0000034!7.88e-13!444;CL:0002334!7.83e-10!12;CL:0000359!9.47e-10!32;CL:0002371!2.11e-08!591;CL:0002570!8.04e-08!8;CL:0002320!4.60e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.92e-15;23!CL:0002334;3.02e-13;12!CL:0000057;6.55e-11;73!CL:0002570;1.17e-10;8!CL:0000187;1.06e-08;55!CL:0000192;1.37e-08;43!CL:0000393;2.73e-08;61!CL:0000211;2.73e-08;61!CL:0002559;2.91e-08;5!CL:0002320;5.64e-08;188!CL:0000723;6.68e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.85e-31,76;CL:0000048,7.33e-20,427;CL:0000723,4.32e-19,433;CL:0000034,4.24e-18,441;CL:0002620,2.78e-15,23;CL:0000187,6.64e-15,55;CL:0000680,1.46e-14,58;CL:0000056,1.46e-14,58;CL:0000355,1.46e-14,58;CL:0002334,6.51e-14,12;CL:0000393,1.69e-12,61;CL:0000211,1.69e-12,61;CL:0002320,3.15e-12,361;CL:0000192,6.06e-11,43;CL:0000514,6.06e-11,43;CL:0002570,6.49e-11,8;CL:0000134,1.97e-09,354;CL:0002559,3.03e-08,5;CL:0000219,2.18e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000514;1.37e-08;43!CL:0000355;2.96e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;4.76e-07;5!DOID:450;4.76e-07;5!DOID:66;4.76e-07;5!DOID:423;4.76e-07;5!DOID:0080000;4.76e-07;5!DOID:11722;4.76e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.76e-07,5;DOID:450,5.76e-07,5;DOID:66,5.76e-07,5;DOID:423,5.76e-07,5;DOID:0080000,5.76e-07,5;DOID:11722,5.76e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.12e-25!83;UBERON:0002329!1.12e-25!83;UBERON:0003077!1.12e-25!83;UBERON:0003059!1.12e-25!83;UBERON:0007282!1.12e-25!83;UBERON:0009618!1.12e-25!83;UBERON:0007285!1.12e-25!83;UBERON:0004290!1.22e-23!70;UBERON:0000486!2.74e-20!82;UBERON:0001134!1.37e-18!61;UBERON:0002036!1.37e-18!61;UBERON:0003082!1.37e-18!61;UBERON:0002385!2.12e-18!63;UBERON:0001015!2.12e-18!63;UBERON:0000383!2.12e-18!63;UBERON:0005256!1.16e-15!143;UBERON:0002199!1.03e-14!45;UBERON:0002416!1.03e-14!45;UBERON:0003102!1.46e-13!95;UBERON:0000475!4.15e-12!365;UBERON:0001013!2.29e-11!14;UBERON:0002097!2.89e-11!40;UBERON:0002100!1.02e-10!216;UBERON:0004923!5.73e-09!57;UBERON:0000490!2.21e-08!138;UBERON:0004872!6.09e-08!84;UBERON:0002384!2.00e-07!375;UBERON:0002067!9.97e-07!9;UBERON:0004016!9.97e-07!9;UBERON:0010083!9.97e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.13e-12;14!UBERON:0002199;1.96e-11;46!UBERON:0002416;1.96e-11;46!UBERON:0002097;4.66e-10;41!UBERON:0003102;1.32e-09;50!UBERON:0002384;5.34e-09;198!UBERON:0002073;2.91e-08;5!UBERON:0004905;8.57e-08;8!UBERON:0000982;8.57e-08;8!UBERON:0004770;8.57e-08;8!UBERON:0002072;1.10e-07;5!UBERON:0002385;1.55e-07;31!UBERON:0001015;1.55e-07;31!UBERON:0000383;1.55e-07;31!UBERON:0004457;4.84e-07;9!UBERON:0000042;4.84e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.63e-18,73;UBERON:0002199,4.50e-18,46;UBERON:0002416,4.50e-18,46;UBERON:0002329,4.82e-18,71;UBERON:0003059,4.82e-18,71;UBERON:0007282,4.82e-18,71;UBERON:0004290,4.82e-18,71;UBERON:0009618,4.82e-18,71;UBERON:0003077,1.28e-17,72;UBERON:0007285,1.28e-17,72;UBERON:0000486,5.53e-16,83;UBERON:0007503,2.57e-15,78;UBERON:0001134,2.92e-15,62;UBERON:0002036,2.92e-15,62;UBERON:0003082,2.92e-15,62;UBERON:0002385,1.87e-14,64;UBERON:0001015,1.87e-14,64;UBERON:0000383,1.87e-14,64;UBERON:0003102,8.94e-14,99;UBERON:0002097,2.94e-13,41;UBERON:0001013,1.15e-12,14;UBERON:0002384,9.14e-12,371;UBERON:0005256,5.12e-11,122;UBERON:0003104,2.85e-09,160;UBERON:0009142,2.85e-09,160;UBERON:0002073,3.03e-08,5;UBERON:0005086,3.03e-08,5;UBERON:0000490,6.90e-08,148;UBERON:0004905,7.08e-08,8;UBERON:0000982,7.08e-08,8;UBERON:0004770,7.08e-08,8;UBERON:0002072,8.59e-08,5;UBERON:0004923,2.40e-07,66;UBERON:0002204,2.81e-07,167;UBERON:0002100,6.62e-07,199 | |||
|phase1_expression=1.99846217197612,1.71280419112787,3.38290569830331,2.00146596706261,0.893922188854576,0.872338524100369,2.53299878168311,8.84407822797563,9.66386824339403,0,0,0.873765488520689,1.05506791291381,2.47532705920093,1.32558950291166,2.01697543935533,1.20538905604795,0.730310090387373,0.975865597581014,0,0.204000691244253,0,0,0,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0.670700859703636,1.02290049474824,6.50590474292219,1.50401373190767,0.579386075843295,0,0.486634870302636,0.0945348171640679,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9515512271251,0.886413581652058,1.19168262731897,8.3182620017156,3.19201543978521,1.68203280042692,1.06748995729705,0.74000264525148,0.933633106199299,0,0.326923806226917,1.81628913173918,2.30470369792,0.234321431833797,4.99456122928513,0.570471821544449,2.83952493048422,0.587172493218824,0.971237666208789,0.280901613404497,1.83738754129404,1.10550885580591,2.37649296704261,2.37600571456411,3.70900393917835,0,0.718618141816238,0.336672227908132,0.500474079487857,0.277064115484183,2.19488810440419,3.0648779579902,1.80285670687916,0.340296549480063,11.1221574127094,4.05759038755278,1.69545520927649,9.90300617078528,1.03052529238439,4.89517026086695,3.7223371266318,4.05063197379039,1.46155507741798,6.81571190459109,2.39329736469978,1.93975268182574,11.7153165530483,1.81353776809752,3.39121184620975,0,0,0,0,0,0,0.10366105501537,0,0,9.38697193978896,9.00537313470039,6.90674606762403,4.64367928031979,4.33127689001751,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0.8231480226628,2.94017422771084,1.26755034821831,0,0,0,0,1.20097467208968,0,0,0,0,1.3032332212413,0,1.44331342025273,0.34779121492523,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.308482478109971,0,0,0.336393253036082,0,1.83345714552375,0.258543431515556,39.3422090437071,4.22651376278,1.59562869950922,3.12022310734098,1.80045161983499,0,1.0656887160644,2.57360388584666,9.76718889704597,0,1.62868092146868,1.42156779497018,0.791951872933429,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,1.01346914667305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96306386750624,9.00306937907419,2.17012018959788,3.53550464602372,5.88815663030634,6.46579901639132,3.04567678981054,1.50473049863859,0,0,1.32845119707087,0.737476674166813,5.38678409702114,4.89502893656851,2.05886054286514,0,0,0,3.33440328590885,0,8.76931850656073,2.97729369382532,1.68808170616869,1.96462066103151,3.84417447767103,1.53512174720011,3.69964018630297,1.48418066444991,2.92998418225046,6.39222211127257,4.68124789278712,1.55776328755086,5.34567740915813,0,0,0,0.459257792658427,1.27463817604702,1.44236856455367,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,1.6068392984416,2.70678011217942,1.84858340537573,2.45605879561807,0.413509717453592,2.0409846524972,3.0453505721988,1.53407929348982,3.11612124763581,0,0,0,0,0.929691098594572,10.3888074454111,2.7881490806424,0.308033580176089,0,4.34966496037536,1.11194531462352,0,2.232950216158,1.2655176988749,1.33441135746677,3.07077349573601,1.28381696410176,7.95508119814842,0,0.359744915166629,1.37268514868027,1.06031162111118,0.808729926293264,0,0.842516912477962,0.48763373908959,0.487426979262569,2.11300293513511,4.50449707646353,2.12108147930569,3.39024349860728,3.85955740482287,0,0,2.31510213706675,2.62357900818653,0.202910376962704,1.239293992399,0.563391205064483,1.00387946542836,2.25972794330179,0.35667105148125,1.06428319221179,6.75544432952525,15.1475650761555,1.13841952129715,2.0996083214699,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,1.24415835064723,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.538651809526579,0,0,0,0,0.638002319463839,1.37396390102793,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,1.60515529459758,0,0,0,0,0.394584402849391,1.20990716048664,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,1.08089965062721,0,0,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0.262272940674991,0,0,0,1.42939065274673,0,0,0.542999601753713,0,1.63293680054705,0,0,0,0.679872549120754,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0.144921028610825,3.88062487505873,3.97312626740282,2.77402930751307,1.51522404220071,2.51567901752575,2.66943366478961,1.14420034198462,2.11723293268535,1.39893480524502,0,0.31859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| ||
|short_description=p@chr11:66083335..66083379,+ | |||
}} | }} |
Latest revision as of 01:01, 24 July 2015
Short description: | p@chr11:66083335..66083379, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:66083335..66083379, + |
Coexpression cluster: | C563_Mesenchymal_Fibroblast_Adipocyte_tenocyte_Placental_Hair_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.85e-31 | 76 |
multi fate stem cell | 7.33e-20 | 427 |
somatic stem cell | 4.32e-19 | 433 |
stem cell | 4.24e-18 | 441 |
skin fibroblast | 2.78e-15 | 23 |
muscle cell | 6.64e-15 | 55 |
muscle precursor cell | 1.46e-14 | 58 |
myoblast | 1.46e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.46e-14 | 58 |
preadipocyte | 6.51e-14 | 12 |
electrically responsive cell | 1.69e-12 | 61 |
electrically active cell | 1.69e-12 | 61 |
connective tissue cell | 3.15e-12 | 361 |
smooth muscle cell | 6.06e-11 | 43 |
smooth muscle myoblast | 6.06e-11 | 43 |
mesenchymal stem cell of adipose | 6.49e-11 | 8 |
mesenchymal cell | 1.97e-09 | 354 |
hair follicle cell | 3.03e-08 | 5 |
motile cell | 2.18e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 1.63e-18 | 73 |
integument | 4.50e-18 | 46 |
integumental system | 4.50e-18 | 46 |
somite | 4.82e-18 | 71 |
presomitic mesoderm | 4.82e-18 | 71 |
presumptive segmental plate | 4.82e-18 | 71 |
dermomyotome | 4.82e-18 | 71 |
trunk paraxial mesoderm | 4.82e-18 | 71 |
paraxial mesoderm | 1.28e-17 | 72 |
presumptive paraxial mesoderm | 1.28e-17 | 72 |
multilaminar epithelium | 5.53e-16 | 83 |
epithelial vesicle | 2.57e-15 | 78 |
skeletal muscle tissue | 2.92e-15 | 62 |
striated muscle tissue | 2.92e-15 | 62 |
myotome | 2.92e-15 | 62 |
muscle tissue | 1.87e-14 | 64 |
musculature | 1.87e-14 | 64 |
musculature of body | 1.87e-14 | 64 |
surface structure | 8.94e-14 | 99 |
skin of body | 2.94e-13 | 41 |
adipose tissue | 1.15e-12 | 14 |
connective tissue | 9.14e-12 | 371 |
trunk mesenchyme | 5.12e-11 | 122 |
mesenchyme | 2.85e-09 | 160 |
entire embryonic mesenchyme | 2.85e-09 | 160 |
hair follicle | 3.03e-08 | 5 |
hair follicle placode | 3.03e-08 | 5 |
unilaminar epithelium | 6.90e-08 | 148 |
articulation | 7.08e-08 | 8 |
skeletal joint | 7.08e-08 | 8 |
articular system | 7.08e-08 | 8 |
hypodermis | 8.59e-08 | 5 |
organ component layer | 2.40e-07 | 66 |
musculoskeletal system | 2.81e-07 | 167 |
trunk | 6.62e-07 | 199 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.76e-07 | 5 |
myotonic disease | 5.76e-07 | 5 |
muscle tissue disease | 5.76e-07 | 5 |
myopathy | 5.76e-07 | 5 |
muscular disease | 5.76e-07 | 5 |
myotonic dystrophy | 5.76e-07 | 5 |