FFCP PHASE1:Hg19::chr16:68344981..68344992,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54496 | |EntrezGene=54496 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25557 | |HGNC=25557 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NVM4 | |UniProt=Q9NVM4 | ||
|association_with_transcript=36bp_to_uc002evx.1,uc002evy.1,uc010vlg.1_5end | |association_with_transcript=36bp_to_uc002evx.1,uc002evy.1,uc010vlg.1_5end | ||
|cluster_id=chr16:68344981..68344992,+ | |||
|description=CAGE_peak_2_at_PRMT7_5end | |description=CAGE_peak_2_at_PRMT7_5end | ||
|id=chr16:68344981..68344992,+ | |id=chr16:68344981..68344992,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000784;1.33e-08;3!CL:0000785;4.55e-07;1!CL:0000228;4.55e-07;1!CL:0002372;4.55e-07;1!CL:0000819;4.55e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.68e-08,3;CL:0000228,4.06e-07,1;CL:0002372,4.06e-07,1;CL:0000819,8.18e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.43e-18;29 | |||
|ontology_enrichment_disease=DOID:162!8.79e-08!235;DOID:14566!3.08e-07!239 | |ontology_enrichment_disease=DOID:162!8.79e-08!235;DOID:14566!3.08e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:0060073;4.55e-07;1!DOID:8675;4.55e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,8.18e-07,1;DOID:8675,8.18e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!8.89e-09!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.19e-50;9!UBERON:0001557;2.19e-50;9!UBERON:0000072;7.00e-13;37!UBERON:0000065;2.94e-11;44!UBERON:0001389;4.55e-07;1!UBERON:0000026;4.55e-07;1!UBERON:0008784;4.55e-07;1!UBERON:0006058;4.55e-07;1!UBERON:0003663;4.55e-07;1!UBERON:0004256;4.55e-07;1!UBERON:0004708;4.55e-07;1!UBERON:0002101;4.55e-07;1!UBERON:0004709;4.55e-07;1!UBERON:0002529;4.55e-07;1!UBERON:0010538;4.55e-07;1!UBERON:0003661;4.55e-07;1!UBERON:0010890;4.55e-07;1!UBERON:0002471;4.55e-07;1!UBERON:0001383;4.55e-07;1!UBERON:0010758;4.55e-07;1!UBERON:0010707;4.55e-07;1!UBERON:0000978;4.55e-07;1!UBERON:0002103;4.55e-07;1!UBERON:0001665;4.55e-07;1!UBERON:0003823;4.55e-07;1!UBERON:0000154;4.55e-07;1!UBERON:0010709;4.55e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.48e-50,9;UBERON:0001557,7.97e-29,19;UBERON:0008947,2.07e-13,38;UBERON:0003258,2.07e-13,38;UBERON:0000072,7.42e-13,47;UBERON:0000065,6.37e-11,54;UBERON:0001004,2.00e-07,74;UBERON:0005418,6.12e-07,1;UBERON:0001389,6.12e-07,1;UBERON:0000026,6.12e-07,1;UBERON:0008784,6.12e-07,1;UBERON:0006058,6.12e-07,1;UBERON:0003663,6.12e-07,1;UBERON:0004256,6.12e-07,1;UBERON:0004708,6.12e-07,1;UBERON:0002101,6.12e-07,1;UBERON:0004709,6.12e-07,1;UBERON:0002529,6.12e-07,1;UBERON:0010538,6.12e-07,1;UBERON:0003661,6.12e-07,1;UBERON:0010890,6.12e-07,1;UBERON:0002471,6.12e-07,1;UBERON:0001383,6.12e-07,1;UBERON:0004357,6.12e-07,1;UBERON:0004347,6.12e-07,1;UBERON:0005420,6.12e-07,1;UBERON:0005732,6.12e-07,1;UBERON:0010758,6.12e-07,1;UBERON:0010707,6.12e-07,1;UBERON:0000978,6.12e-07,1;UBERON:0002103,6.12e-07,1;UBERON:0001665,6.12e-07,1;UBERON:0003823,6.12e-07,1;UBERON:0000154,6.12e-07,1;UBERON:0010709,6.12e-07,1;UBERON:0005733,6.12e-07,1;UBERON:0005730,6.12e-07,1 | |||
|phase1_expression=0,0.642301571672949,0,0,1.34088328328186,0,0,0,1.04474251279935,0,1.39560233594486,0.218441372130172,0,0.123766352960047,0,0.672325146451775,0,0.730310090387373,0,0.123121058076788,0.612002073732759,0,0.286235987131057,0,0.251085279189606,0.229240217243854,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0.387336002901508,0.142169232487422,0,0,0,0,0.223915474239924,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334372990781356,0,0.946895611469467,0,0.222820913770347,0,0,0.270803863765016,0.25618263945135,0.260118695119756,0.328875809207352,0.552700035571697,0.289803085735052,0.296573126324121,0,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.175669571386252,0.0654895377488563,0.364295288292542,0,0,0.174129737299267,0.132957960518865,1.43094374583205,1.14398982156026,0.371457501329565,0.39752481473341,0,0,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0.269421344139376,0.326923806226917,0.151357427644931,0,0.234321431833797,0.312160076830321,0.570471821544449,0,0.117434498643765,0.647491777472526,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0.179389635688862,0,0.211931901159562,1.50045548042201,0.412210116953756,0.257640540045629,0.18611685633159,0.675105328965065,0.0974370051611986,0.252433774244115,0,0.161646056818812,0,0,0.339121184620975,0.193260853163297,0,0,0.487894824518382,0.530119073285941,0.232387885739037,0.414644220061482,0,0,0,0,0,0.464367928031979,0.721879481669586,1.41968160047813,2.86593973132773,1.44606617930089,1.43382164552112,1.08939722046203,1.42362371466658,1.07865046528132,1.56977172100277,1.53898862778556,0,0,0.4115740113314,0,0,0.982827216677626,0,0.882926198829301,0.737930631258681,0,0,0,0.100528972411631,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0,0,0,0,0.088048434013226,0.414656231081544,0,0.12624243342638,0.380987365753014,0,2.34434894420094,0,0.308482478109971,0.600686115687835,0,0.224262168690721,0,0.22001485746285,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,1.42636905040718,0.289562613335158,0,0.179060963239896,0.112085143993527,0,0.215627574859517,0,0,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0,0,0,0.234282829985426,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,0,0,0,0.164254312027618,0.519254429183621,0.116210378459959,1.57117284469109,0,0.0920809889358963,0.34444334449382,0,0,0,0,0.784349769176855,1.46139224653261,0,0,0,0,0,0,0.501689773854853,0,0,0,0.438519753291869,0.784306353074702,0.512900250232778,1.64007322849853,0,0.206082023295445,0,0.082509499920588,0,0,0,0.096670718292122,0.308097234229289,0.614014698904518,0.413509717453592,0.214840489736547,0,0.0852266274161009,0.356128142586949,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0.404364963146632,0,0.421258456238981,0.48763373908959,0.243713489631284,0,0.545999645631943,0,0,0,0,0,0.578775534266688,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0.540031437238115,0,0.427296284509893,0,0,0.929015875628594,0.28853842595289,0.426851060090485,0.797131363644112,0.199579371432817,0.383010740264733,0.423347165447766,0.324621940274555,0,0.456469358066384,0.313359791546046,0,2.20079311142084,0,0.80719882876419,0.851692475380653,0,1.53620382154229,0.223676107892416,0.166849141711909,0.390776190804081,0.278406173895242,0,0,0,1.4098700508785,0,0,0.121360521749513,0.780103689942349,0,0,0,0,0.994147647766298,0.140669416410513,0.111308705022906,0,0.211125408127993,0,0,0,0,0.492339221844278,0,0.0898683511473268,0,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0,0.254253650292766,1.41832609060762,0.689486746482929,0.291604613383254,0,0,0.120596438625408,0,0.110579259931225,0.591095237907095,0.219385397153973,0.871507708151921,0.557694977114413,0,0,0.46112780877612,0.718061155278177,0.54323685961004,0.31900115973192,0.274792780205587,0,0,0.470940769185074,0.166211681900156,0.225595660617181,0,0,0.189753732724185,0.635746315921515,0.210998064528027,0.489698424477443,1.83758992864123,0.649165919226273,0,0.0884575645033392,1.22206028986725,0.593042257361244,0.617819694732514,0.626531697032732,0.134802265961354,0,0,1.094728735294,0,0.485560759068186,0,0,0,0.126373159256976,1.20258735531594,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0.293977192243133,0,0,0,0.967563312890852,0.438535902517113,0.739039113478883,0,0,0,0.411125773940253,0,0.126621591911757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| ||
|short_description=p2@PRMT7 | |short_description=p2@PRMT7 | ||
}} | }} |
Latest revision as of 13:26, 17 September 2015
Short description: | p2@PRMT7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRMT7_5end |
Coexpression cluster: | NA |
Association with transcript: | 36bp_to_uc002evx.1, uc002evy.1, uc010vlg.1_5end |
EntrezGene: | PRMT7 |
HGNC: | 25557 |
UniProt: | Q9NVM4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.68e-08 | 3 |
multinucleate cell | 4.06e-07 | 1 |
myotube | 4.06e-07 | 1 |
B-1 B cell | 8.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.48e-50 | 9 |
upper respiratory tract | 7.97e-29 | 19 |
respiratory primordium | 2.07e-13 | 38 |
endoderm of foregut | 2.07e-13 | 38 |
segment of respiratory tract | 7.42e-13 | 47 |
respiratory tract | 6.37e-11 | 54 |
respiratory system | 2.00e-07 | 74 |
hindlimb bud | 6.12e-07 | 1 |
soleus muscle | 6.12e-07 | 1 |
appendage | 6.12e-07 | 1 |
lower limb segment | 6.12e-07 | 1 |
multi-limb segment region | 6.12e-07 | 1 |
hindlimb muscle | 6.12e-07 | 1 |
hindlimb zeugopod muscle | 6.12e-07 | 1 |
paired limb/fin | 6.12e-07 | 1 |
limb | 6.12e-07 | 1 |
pelvic appendage | 6.12e-07 | 1 |
limb segment | 6.12e-07 | 1 |
paired limb/fin segment | 6.12e-07 | 1 |
limb muscle | 6.12e-07 | 1 |
pelvic complex muscle | 6.12e-07 | 1 |
zeugopod | 6.12e-07 | 1 |
muscle of leg | 6.12e-07 | 1 |
paired limb/fin bud | 6.12e-07 | 1 |
limb bud | 6.12e-07 | 1 |
pelvic appendage bud | 6.12e-07 | 1 |
limb/fin field | 6.12e-07 | 1 |
subdivision of organism along appendicular axis | 6.12e-07 | 1 |
appendage girdle complex | 6.12e-07 | 1 |
leg | 6.12e-07 | 1 |
hindlimb | 6.12e-07 | 1 |
triceps surae | 6.12e-07 | 1 |
hindlimb zeugopod | 6.12e-07 | 1 |
posterior region of body | 6.12e-07 | 1 |
pelvic complex | 6.12e-07 | 1 |
limb field | 6.12e-07 | 1 |
hindlimb/pelvic fin field | 6.12e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 8.18e-07 | 1 |
lymphosarcoma | 8.18e-07 | 1 |