FFCP PHASE1:Hg19::chr16:68678922..68678943,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1001 | |EntrezGene=1001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1762 | |HGNC=1762 | ||
|TSSclassifier=strong | |||
|UniProt=P22223 | |UniProt=P22223 | ||
|association_with_transcript=183bp_to_ENST00000264012_5end | |association_with_transcript=183bp_to_ENST00000264012_5end | ||
|cluster_id=chr16:68678922..68678943,+ | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_6_at_CDH3_5end | |description=CAGE_peak_6_at_CDH3_5end | ||
|id=chr16:68678922..68678943,+ | |id=chr16:68678922..68678943,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.38e-07!10;CL:0000541!1.38e-07!10;CL:0000075!5.30e-07!27 | |ontology_enrichment_celltype=CL:0000148!1.38e-07!10;CL:0000541!1.38e-07!10;CL:0000075!5.30e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000148;7.29e-75;10!CL:0000147;1.93e-53;14!CL:0002567;4.73e-47;3!CL:0000710;2.38e-37;20!CL:0000075;1.34e-27;27!CL:0002077;2.53e-19;34!CL:0002566;5.98e-17;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,7.30e-75,10;CL:0000541,7.30e-75,10;CL:0000147,1.94e-53,14;CL:0002567,4.73e-47,3;CL:0000710,2.38e-37,20;CL:0000075,1.34e-27,27;CL:0000333,2.58e-22,41;CL:0002077,7.50e-22,34;CL:0002566,5.53e-17,1;CL:0000133,1.46e-15,59;CL:0000221,1.01e-12,72 | |||
|ontology_enrichment_development_v019=CL:0000133;8.21e-09;59!CL:0000221;9.42e-09;72 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p6@CDH3 | |short_description=p6@CDH3 | ||
}} | }} |
Latest revision as of 14:00, 17 September 2015
Short description: | p6@CDH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CDH3_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 183bp_to_ENST00000264012_5end |
EntrezGene: | CDH3 |
HGNC: | 1762 |
UniProt: | P22223 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 7.30e-75 | 10 |
melanoblast | 7.30e-75 | 10 |
pigment cell | 1.94e-53 | 14 |
light melanocyte | 4.73e-47 | 3 |
neurecto-epithelial cell | 2.38e-37 | 20 |
columnar/cuboidal epithelial cell | 1.34e-27 | 27 |
migratory neural crest cell | 2.58e-22 | 41 |
ecto-epithelial cell | 7.50e-22 | 34 |
dark melanocyte | 5.53e-17 | 1 |
neurectodermal cell | 1.46e-15 | 59 |
ectodermal cell | 1.01e-12 | 72 |