FFCP PHASE1:Hg19::chr20:43850995..43851023,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:43850995..43851023,+ | |||
|coexpression_cluster_id=C43 | |||
|description=CAGE_peak_at_chr20:43850995..43851023,+ | |description=CAGE_peak_at_chr20:43850995..43851023,+ | ||
|id=chr20:43850995..43851023,+ | |id=chr20:43850995..43851023,+ | ||
|ontology_enrichment_celltype=CL:0002166!3.24e-12!3 | |ontology_enrichment_celltype=CL:0002166!3.24e-12!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;9.37e-99;1!UBERON:0007297;2.74e-50;2!UBERON:0003918;2.73e-11;10!UBERON:0007687;2.73e-11;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!5.00e-45!3;UBERON:0004054!5.00e-45!3;UBERON:0000998!1.84e-34!1;UBERON:0006868!1.84e-34!1;UBERON:0001000!2.58e-34!1;UBERON:0005352!2.58e-34!1;UBERON:0000989!3.61e-34!1;UBERON:0008811!3.61e-34!1;UBERON:0006258!3.61e-34!1;UBERON:0005876!3.61e-34!1;UBERON:0004874!3.61e-34!1;UBERON:0005904!4.28e-34!4;UBERON:0003135!8.12e-28!11;UBERON:0003101!1.43e-24!22;UBERON:0000079!1.43e-24!22;UBERON:0001255!9.07e-18!2;UBERON:0001556!9.07e-18!2;UBERON:0003064!7.36e-15!37;UBERON:0003937!4.80e-12!12;UBERON:0005399!4.80e-12!12;UBERON:0000162!2.08e-10!14;UBERON:0001353!2.08e-10!14;UBERON:0000163!2.08e-10!14;UBERON:0006866!2.08e-10!14;UBERON:0000164!2.08e-10!14;UBERON:0000931!2.08e-10!14;UBERON:0004122!8.85e-10!15;UBERON:0005156!1.49e-09!59;UBERON:0000990!1.49e-09!59;UBERON:0001708!1.70e-09!4;UBERON:0001704!1.70e-09!4;UBERON:0001046!6.36e-08!19;UBERON:0004876!1.21e-07!20;UBERON:0007023!1.25e-07!115;UBERON:0006554!1.68e-07!44;UBERON:0001008!2.38e-07!45;UBERON:0003133!5.76e-07!48;UBERON:0002090!9.49e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;8.98e-131;3!UBERON:0004054;8.98e-131;3!UBERON:0000998;9.37e-99;1!UBERON:0006868;9.37e-99;1!UBERON:0005904;1.55e-98;4!UBERON:0001000;2.55e-98;1!UBERON:0005352;2.55e-98;1!UBERON:0000058;2.00e-40;10!UBERON:0003135;6.80e-37;11!UBERON:0004175;4.86e-20;21!UBERON:0003101;3.41e-19;22!UBERON:0000079;3.41e-19;22!UBERON:0000473;9.39e-14;8!UBERON:0003937;1.22e-09;12!UBERON:0005399;1.22e-09;12!UBERON:0005156;3.42e-07;59!UBERON:0000990;3.42e-07;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,8.98e-131,3;UBERON:0004054,8.98e-131,3;UBERON:0000998,9.37e-99,1;UBERON:0006868,9.37e-99,1;UBERON:0005904,1.55e-98,4;UBERON:0001000,2.55e-98,1;UBERON:0005352,2.55e-98,1;UBERON:0003135,6.80e-37,11;UBERON:0000058,5.37e-22,19;UBERON:0003101,3.41e-19,22;UBERON:0000079,3.41e-19,22;UBERON:0004175,4.64e-17,25;UBERON:0000473,9.39e-14,8;UBERON:0000080,2.19e-12,9;UBERON:0002120,2.19e-12,9;UBERON:0004875,2.19e-12,9;UBERON:0005721,2.19e-12,9;UBERON:0005754,2.19e-12,9;UBERON:0007297,2.19e-12,9;UBERON:0004876,2.16e-10,11;UBERON:0003937,1.22e-09,12;UBERON:0005399,1.22e-09,12;UBERON:0003887,1.22e-09,12;UBERON:0003133,1.62e-09,48;UBERON:0005156,5.66e-08,59;UBERON:0000990,5.66e-08,59 | |||
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|short_description=p@chr20:43850995..43851023,+ | |short_description=p@chr20:43850995..43851023,+ | ||
}} | }} |
Latest revision as of 14:22, 28 July 2015
Short description: | p@chr20:43850995..43851023, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:43850995..43851023, + |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 8.98e-131 | 3 |
internal male genitalia | 8.98e-131 | 3 |
seminal vesicle | 9.37e-99 | 1 |
seminal fluid secreting gland | 9.37e-99 | 1 |
duct of male reproductive system | 1.55e-98 | 4 |
vas deferens | 2.55e-98 | 1 |
spermatic cord | 2.55e-98 | 1 |
male reproductive organ | 6.80e-37 | 11 |
duct | 5.37e-22 | 19 |
male organism | 3.41e-19 | 22 |
male reproductive system | 3.41e-19 | 22 |
internal genitalia | 4.64e-17 | 25 |
testis | 9.39e-14 | 8 |
mesonephros | 2.19e-12 | 9 |
pronephros | 2.19e-12 | 9 |
nephrogenic cord | 2.19e-12 | 9 |
pronephric mesoderm | 2.19e-12 | 9 |
rostral part of nephrogenic cord | 2.19e-12 | 9 |
presumptive pronephric mesoderm | 2.19e-12 | 9 |
urogenital ridge | 2.16e-10 | 11 |
sex gland | 1.22e-09 | 12 |
male reproductive gland | 1.22e-09 | 12 |
intraembryonic coelom | 1.22e-09 | 12 |
reproductive organ | 1.62e-09 | 48 |
reproductive structure | 5.66e-08 | 59 |
reproductive system | 5.66e-08 | 59 |