FFCP PHASE1:Hg19::chr20:48164465..48164477,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:48164465..48164477,- | |||
|coexpression_cluster_id=C517 | |||
|description=CAGE_peak_at_chr20:48164465..48164477,- | |description=CAGE_peak_at_chr20:48164465..48164477,- | ||
|id=chr20:48164465..48164477,- | |id=chr20:48164465..48164477,- | ||
|ontology_enrichment_celltype=CL:0002334!2.14e-12!12;CL:0000057!1.37e-09!75;CL:1000306!9.38e-09!4;CL:0002547!9.38e-09!4;CL:0000055!9.85e-09!180;CL:0000136!1.13e-07!15;CL:0002579!2.03e-07!3;CL:0002615!3.00e-07!3;CL:0002595!4.12e-07!5;CL:0000135!4.51e-07!3;CL:0000386!4.51e-07!3;CL:0000388!4.51e-07!3 | |ontology_enrichment_celltype=CL:0002334!2.14e-12!12;CL:0000057!1.37e-09!75;CL:1000306!9.38e-09!4;CL:0002547!9.38e-09!4;CL:0000055!9.85e-09!180;CL:0000136!1.13e-07!15;CL:0002579!2.03e-07!3;CL:0002615!3.00e-07!3;CL:0002595!4.12e-07!5;CL:0000135!4.51e-07!3;CL:0000386!4.51e-07!3;CL:0000388!4.51e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002579;7.93e-29;3!CL:0002334;1.07e-19;12!CL:0000214;1.50e-13;3!CL:0002174;8.61e-11;1!CL:0002581;8.61e-11;1!CL:0002616;8.61e-11;1!CL:0000501;8.61e-11;1!CL:1000306;1.36e-10;4!CL:0002547;1.36e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,2.62e-28,3;CL:0002334,1.47e-19,12;CL:0000214,7.92e-14,3;CL:0002616,4.58e-11,1;CL:0002581,6.14e-11,1;CL:0002174,9.97e-11,1;CL:0000501,9.97e-11,1;CL:1000306,1.78e-10,4;CL:0002547,1.78e-10,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!5.20e-13!6;UBERON:0002358!5.20e-13!6;UBERON:0003684!5.20e-13!6;UBERON:0001178!5.20e-13!6;UBERON:0004457!1.03e-10!12;UBERON:0000042!1.03e-10!12;UBERON:0004573!3.61e-09!33;UBERON:0004571!3.61e-09!33;UBERON:0000415!9.38e-09!4;UBERON:0007240!9.38e-09!4;UBERON:0005742!9.38e-09!4;UBERON:0005734!9.38e-09!4;UBERON:0004664!9.38e-09!4;UBERON:0004663!9.38e-09!4;UBERON:0001637!1.70e-07!42;UBERON:0003509!1.70e-07!42;UBERON:0004572!1.70e-07!42;UBERON:0003834!4.12e-07!5;UBERON:0001533!4.12e-07!5;UBERON:0000043!4.51e-07!3;UBERON:0004905!8.14e-07!5;UBERON:0000982!8.14e-07!5;UBERON:0004770!8.14e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.02e-37;9!UBERON:0000042;2.02e-37;9!UBERON:0003688;1.31e-25;6!UBERON:0002358;1.31e-25;6!UBERON:0003684;1.31e-25;6!UBERON:0001178;1.31e-25;6!UBERON:0005406;7.90e-20;2!UBERON:0006915;1.50e-13;3!UBERON:0007616;1.50e-13;3!UBERON:0002217;1.50e-13;3!UBERON:0002018;1.50e-13;3!UBERON:0004797;1.36e-10;4!UBERON:0000415;1.36e-10;4!UBERON:0007240;1.36e-10;4!UBERON:0005742;1.36e-10;4!UBERON:0005734;1.36e-10;4!UBERON:0004664;1.36e-10;4!UBERON:0004663;1.36e-10;4!UBERON:0004458;8.09e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,6.28e-28,12;UBERON:0000042,6.28e-28,12;UBERON:0003688,3.11e-25,6;UBERON:0002358,3.11e-25,6;UBERON:0003684,3.11e-25,6;UBERON:0001178,3.11e-25,6;UBERON:0005406,3.02e-20,2;UBERON:0006915,7.92e-14,3;UBERON:0007616,7.92e-14,3;UBERON:0002217,7.92e-14,3;UBERON:0002018,7.92e-14,3;UBERON:0000415,1.78e-10,4;UBERON:0007240,1.78e-10,4;UBERON:0005742,1.78e-10,4;UBERON:0005734,1.78e-10,4;UBERON:0004664,1.78e-10,4;UBERON:0004663,1.78e-10,4;UBERON:0004458,9.63e-09,49;UBERON:0004923,3.29e-08,66;UBERON:0004573,3.83e-07,33;UBERON:0004571,3.83e-07,33 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.422863212287913,2.00146596706261,0.893922188854576,1.74467704820074,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.759783069987479,0.132409180813219,2.0078563452417,1.06400514659507,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0.412210116953756,0.257640540045629,0,0,0,0.252433774244115,0,0.323292113637624,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,1.20575750823834,0.871533458600294,3.69900067373611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,2.24528075546459,1.02511319404561,1.02341449813341,1.44768529029247,1.48418066444991,0,0.177561725313127,0,0,0.232420756919918,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0.858749320451947,0,0,0,0,0,0.318203247925937,3.13979456079692,0,0,0.117812402345686,0,1.58510321173008,0,0,0.487426979262569,0,0,0.565621727814851,0,0.551365343546124,0.66343897524122,1.31535265576129,0,0,0,0,0,0,0,0,0,1.47775344708365,1.97576935775941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,0,0,0.426905989478705,1.59847687665704,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28929632425987,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0,1.24411862352257,0,0,0.300515217994437,1.14241563650639,0,0,0.107410557042488,0.464033759878494,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0.617602894321944,1.31570429747224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980593287015622,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,0,0,0,0.112131862580613,0.0636471582781649,0,0.435433495793923,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.363356758541113,0.428201047781966,0.422863212287913,2.00146596706261,0.893922188854576,1.74467704820074,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.759783069987479,0.132409180813219,2.0078563452417,1.06400514659507,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0.412210116953756,0.257640540045629,0,0,0,0.252433774244115,0,0.323292113637624,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,1.20575750823834,0.871533458600294,3.69900067373611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,2.24528075546459,1.02511319404561,1.02341449813341,1.44768529029247,1.48418066444991,0,0.177561725313127,0,0,0.232420756919918,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0.858749320451947,0,0,0,0,0,0.318203247925937,3.13979456079692,0,0,0.117812402345686,0,1.58510321173008,0,0,0.487426979262569,0,0,0.565621727814851,0,0.551365343546124,0.66343897524122,1.31535265576129,0,0,0,0,0,0,0,0,0,1.47775344708365,1.97576935775941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,0,0,0.426905989478705,1.59847687665704,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28929632425987,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0,1.24411862352257,0,0,0.300515217994437,1.14241563650639,0,0,0.107410557042488,0.464033759878494,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0.617602894321944,1.31570429747224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980593287015622,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,0,0,0,0.112131862580613,0.0636471582781649,0,0.435433495793923,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:48164465..48164477,- | |short_description=p@chr20:48164465..48164477,- | ||
}} | }} |
Latest revision as of 15:02, 28 July 2015
Short description: | p@chr20:48164465..48164477, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:48164465..48164477, - |
Coexpression cluster: | C517_Mesothelial_Synoviocyte_mesothelioma_Fibroblast_Smooth_Preadipocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 2.62e-28 | 3 |
preadipocyte | 1.47e-19 | 12 |
synovial cell | 7.92e-14 | 3 |
perirenal adipocyte cell | 4.58e-11 | 1 |
perirenal preadipocyte | 6.14e-11 | 1 |
follicular cell of ovary | 9.97e-11 | 1 |
granulosa cell | 9.97e-11 | 1 |
fibroblast of tunica adventitia of artery | 1.78e-10 | 4 |
fibroblast of the aortic adventitia | 1.78e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 6.28e-28 | 12 |
serous membrane | 6.28e-28 | 12 |
omentum | 3.11e-25 | 6 |
peritoneum | 3.11e-25 | 6 |
abdominal cavity | 3.11e-25 | 6 |
visceral peritoneum | 3.11e-25 | 6 |
perirenal fat | 3.02e-20 | 2 |
stratified squamous epithelium | 7.92e-14 | 3 |
layer of synovial tissue | 7.92e-14 | 3 |
synovial joint | 7.92e-14 | 3 |
synovial membrane of synovial joint | 7.92e-14 | 3 |
artery wall | 1.78e-10 | 4 |
tunica adventitia of artery | 1.78e-10 | 4 |
adventitia | 1.78e-10 | 4 |
tunica adventitia of blood vessel | 1.78e-10 | 4 |
aorta tunica adventitia | 1.78e-10 | 4 |
aorta wall | 1.78e-10 | 4 |
body cavity or lining | 9.63e-09 | 49 |
organ component layer | 3.29e-08 | 66 |
systemic artery | 3.83e-07 | 33 |
systemic arterial system | 3.83e-07 | 33 |