FFCP PHASE1:Hg19::chr10:71561649..71561703,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1305 | |EntrezGene=1305 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2190 | |HGNC=2190 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TAT6,E7EX21 | |UniProt=Q5TAT6,E7EX21 | ||
|association_with_transcript=0bp_to_ENST00000354547,ENST00000357811,ENST00000398978,ENST00000479733_5end | |||
|cluster_id=chr10:71561649..71561703,+ | |||
|coexpression_cluster_id=C3039 | |||
|description=CAGE_peak_1_at_COL13A1_5end | |||
|id=chr10:71561649..71561703,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.15e-30!180;CL:0000222!1.14e-24!119;CL:0000183!4.28e-20!59;CL:0000057!3.45e-18!75;CL:0000187!6.82e-18!54;CL:0000192!7.29e-18!42;CL:0000514!7.29e-18!42;CL:0000680!8.13e-18!57;CL:0000056!8.13e-18!57;CL:0000355!8.13e-18!57;CL:0000393!1.54e-16!60;CL:0000211!1.54e-16!60;CL:0000359!1.19e-15!32;CL:0002321!4.37e-12!248;CL:0000220!7.35e-12!246;CL:0002139!9.72e-11!24;CL:0000115!1.90e-10!35;CL:0002078!3.85e-09!44;CL:0000071!4.04e-09!18;CL:0002546!4.04e-09!18;CL:0000213!5.49e-08!57;CL:0000215!5.49e-08!57;CL:0002494!1.45e-07!16;CL:0002620!4.77e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.87e-17;32!CL:0000192;4.05e-15;43!CL:0002139;1.12e-11;24!CL:0000115;1.11e-10;36!CL:0000187;2.80e-10;55!CL:0000071;8.69e-10;18!CL:0000057;1.38e-08;73!CL:0002494;2.25e-08;16!CL:0000393;4.18e-08;61!CL:0000211;4.18e-08;61!CL:0002620;1.09e-07;23!CL:0002539;1.69e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.09e-24,121;CL:0000192,7.92e-21,43;CL:0000514,7.92e-21,43;CL:0000057,6.18e-20,76;CL:0000187,2.15e-19,55;CL:0000680,2.42e-19,58;CL:0000056,2.42e-19,58;CL:0000355,2.42e-19,58;CL:0000359,8.07e-18,32;CL:0000393,7.54e-17,61;CL:0000211,7.54e-17,61;CL:0000115,3.81e-12,36;CL:0002139,1.14e-11,24;CL:0002321,2.12e-11,250;CL:0000071,8.82e-10,18;CL:0002546,8.82e-10,18;CL:0002078,2.70e-09,45;CL:0002494,1.72e-08,16;CL:0002620,1.32e-07,23;CL:0002539,1.70e-07,10;CL:0000213,5.54e-07,58;CL:0000215,5.54e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;4.05e-15;43!CL:0000355;4.34e-10;58!CL:0002546;8.69e-10;18!CL:0000222;5.43e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.64e-34!79;UBERON:0007798!2.64e-34!79;UBERON:0000055!1.29e-28!69;UBERON:0004872!5.28e-28!84;UBERON:0001981!9.02e-27!60;UBERON:0007500!9.02e-27!60;UBERON:0004537!9.02e-27!60;UBERON:0006965!9.02e-27!60;UBERON:0004535!1.22e-26!110;UBERON:0001009!2.22e-26!113;UBERON:0003914!2.00e-25!118;UBERON:0001637!3.95e-22!42;UBERON:0003509!3.95e-22!42;UBERON:0004572!3.95e-22!42;UBERON:0000119!2.36e-20!312;UBERON:0000914!3.63e-19!83;UBERON:0002329!3.63e-19!83;UBERON:0003077!3.63e-19!83;UBERON:0003059!3.63e-19!83;UBERON:0007282!3.63e-19!83;UBERON:0009618!3.63e-19!83;UBERON:0007285!3.63e-19!83;UBERON:0000477!4.74e-19!286;UBERON:0000483!4.85e-19!309;UBERON:0004290!8.78e-19!70;UBERON:0004111!5.69e-18!241;UBERON:0000490!5.84e-18!138;UBERON:0004573!5.89e-18!33;UBERON:0004571!5.89e-18!33;UBERON:0005256!1.81e-17!143;UBERON:0000468!2.65e-17!659;UBERON:0001134!2.97e-17!61;UBERON:0002036!2.97e-17!61;UBERON:0003082!2.97e-17!61;UBERON:0002385!3.91e-17!63;UBERON:0001015!3.91e-17!63;UBERON:0000383!3.91e-17!63;UBERON:0000486!2.49e-15!82;UBERON:0000475!7.68e-15!365;UBERON:0000025!1.24e-14!194;UBERON:0000467!8.53e-14!625;UBERON:0000480!1.49e-13!626;UBERON:0000481!1.93e-13!347;UBERON:0002100!4.97e-13!216;UBERON:0000947!4.96e-12!21;UBERON:0010191!4.96e-12!21;UBERON:0000922!8.78e-10!612;UBERON:0000487!8.79e-10!22;UBERON:0001986!4.04e-09!18;UBERON:0004638!4.04e-09!18;UBERON:0004852!4.04e-09!18;UBERON:0003104!5.11e-09!238;UBERON:0009142!5.11e-09!238;UBERON:0006914!6.92e-09!25;UBERON:0002050!7.65e-09!605;UBERON:0005423!7.65e-09!605;UBERON:0000923!1.21e-08!604;UBERON:0005291!1.21e-08!604;UBERON:0006598!1.21e-08!604;UBERON:0002532!1.21e-08!604;UBERON:0000948!7.43e-08!24;UBERON:0005498!7.43e-08!24;UBERON:0004140!7.43e-08!24;UBERON:0009881!7.43e-08!24;UBERON:0004141!7.43e-08!24;UBERON:0003084!7.43e-08!24;UBERON:0007005!7.43e-08!24;UBERON:0004139!7.43e-08!24;UBERON:0004291!7.43e-08!24;UBERON:0007100!1.79e-07!27;UBERON:0000926!4.19e-07!448;UBERON:0004120!4.19e-07!448;UBERON:0006603!4.19e-07!448;UBERON:0003103!4.31e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.62e-19;33!UBERON:0004571;5.62e-19;33!UBERON:0001637;9.08e-19;42!UBERON:0003509;9.08e-19;42!UBERON:0004572;9.08e-19;42!UBERON:0007500;6.20e-16;56!UBERON:0001981;6.20e-16;56!UBERON:0004537;6.20e-16;56!UBERON:0002049;2.93e-15;75!UBERON:0007798;2.93e-15;75!UBERON:0000055;4.82e-15;65!UBERON:0000947;1.12e-13;21!UBERON:0010191;1.12e-13;21!UBERON:0003914;3.42e-12;74!UBERON:0000487;3.00e-10;22!UBERON:0004638;8.69e-10;18!UBERON:0001986;8.69e-10;18!UBERON:0004852;8.69e-10;18!UBERON:0004535;3.34e-09;109!UBERON:0001009;5.87e-09;112!UBERON:0006914;5.53e-08;25!UBERON:0000948;8.01e-08;22!UBERON:0004237;1.69e-07;10!UBERON:0004695;1.69e-07;10!UBERON:0002111;1.69e-07;10!UBERON:0004178;1.69e-07;10!UBERON:0000490;2.51e-07;33!UBERON:0000025;3.61e-07;93 | |||
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|phase1_expression=1.45342703416445,0.856402095563933,1.26858963686374,0,0,0,0,0.631719873426831,0,2.7030733015166,0.697801167972428,0,0,0.74259811776028,0.662794751455832,18.1527789541979,20.4916139528152,17.527442169297,25.3725055371064,23.6392431507433,36.1081223502328,4.07491137921514,0.85870796139317,1.50561867580173,2.88748071068046,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,1.10799081706375,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0.411167888021826,0,0,0,0,0,0,0,0.376484679085209,0.272906150057846,0,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0,1.16083695451434,0.56738522469114,0.622822248995575,0,0.521482918420201,0,0.605399502633369,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,9.38981203585091,3.32442660793179,0,0,0,1.5905718941022,7.29952305453954,6.14476311566441,5.98669373148923,4.3917392846563,1.83370705696798,0.364295288292542,0.370784442784429,0,0,0,0,0,0,23.2552016619045,12.0432843314857,28.1183806302151,22.6123176769604,32.3014565881628,3.57653454522088,24.0344211517332,10.5950871259425,7.1153252537342,2.67776490211736,4.83395180530976,7.60272105718513,0.488124115096339,23.8981002224815,4.0507097394088,20.5389375053383,22.0038785173646,10.9233136068823,29.1301611185178,15.1882505530901,15.755349978015,1.31780417436063,0,0,2.98183171017191,10.8902240031539,23.7012433655662,32.1257015238671,9.22137793715728,3.92474320099615,4.2699598291882,4.68668341992604,9.95875313279252,7.9479296521116,12.7500284428498,28.757911252537,47.2464258073599,2.57753575017176,0.312160076830321,4.56377457235559,7.62188270814185,2.46612447151906,2.75184005425824,2.80901613404497,10.2077085627447,12.5291003658003,5.57959218349133,3.56400857184616,0.741800787835671,10.9219363432563,23.7143986799359,7.74346124188705,7.25687415257392,7.75779523355712,5.70670907145089,5.21029252858333,1.80285670687916,9.30143901912172,14.7099501264867,1.06778694409284,4.02670612203168,36.9112048183815,3.81294358182224,13.1396675423271,4.28068769562657,39.6624380766976,7.1129013767675,9.08761587278812,2.11714766877288,1.45481451136931,23.7856426986132,9.47069723339819,5.93462073086707,0.773043412653187,2.45471508531751,1.72082757233402,1.82960559194393,3.18071443971565,4.99633954338929,3.21349270547648,2.01856680700503,2.55484151353081,4.69348596989448,8.36213219650751,11.0507937081984,3.25057549622385,2.88751792667834,0,0,0,0,0,0,0,0,0,2.21446636387394,14.0241773803446,3.7041661019826,4.41026134156626,0,0,2.95394953340702,0,0,12.0097467208968,0.768251997860379,0,1.60846355858609,0.925884451585296,0.651616610620649,5.19967392639789,36.0828355063183,4.17349457910277,3.05262605013136,10.1056513432752,7.87075371380238,4.37584550139576,0,0,0,0.234004265139238,0,0,1.6798212819886,1.41775097242386,0.985143749731331,1.16253575405585,3.06706143332169,14.2872338989824,34.5149861331846,42.2949355703175,33.724069099569,31.6868507900214,0.507983154337352,0,0,0,0.205654985406647,0,0,35.5455537374793,20.0541631663309,34.1023029067418,13.7028018703244,0,2.535908257668,4.78688609852767,3.12022310734098,7.20180647933998,5.67396528093113,8.52550972851518,0.428933980974443,2.71310802695722,5.76268235746538,1.95441710576241,0.355391948742546,2.37585561880029,1.20575750823834,0.871533458600294,0.799783929456456,0,0,0,1.91699884393266,0,12.8373214536647,3.32997005335432,1.2328579353023,1.25342674267927,0,0.591092280605782,0,0.256686072559497,0,1.30139853857622,0,0.502548796003046,0.637938751653163,0,0,0.828831026872071,1.2269149171914,2.50085260529839,2.98391526069709,0.831883446123229,6.0665856191035,2.52323864054295,1.52283839490527,0.300946099727719,0,1.03473071292505,0.664225598535437,1.84369168541703,7.38510722978704,67.5513993246455,76.5209835098209,0,0.431428401637234,0,0,1.66435439510497,0,1.73675465473144,11.5096479966047,3.08726103876381,4.61300937320523,4.09365799253363,4.18220194973379,1.48418066444991,5.39733928309294,11.186388694727,10.2658945017261,24.4049581716302,14.177666172115,0,0.601519410909855,0.0920809889358963,8.15182581968708,10.7433789123963,2.75361271414791,3.60959690325929,2.23344477602803,7.0591479225917,1.46139224653261,0.316654886678627,21.6093429734704,22.9626502123296,8.85255256018771,4.62681758070868,6.23176806350862,2.00675909541941,2.29388645740534,0.831076008928724,2.68649705666614,0,0,0.256450125116389,0.328014645699706,0,1.03041011647722,1.19040304263846,0.82509499920588,0,0,17.6752322828576,2.22342652071881,1.23238893691716,0.307007349452259,1.51620229732984,0.859361958946189,1.30515024522806,1.36362603865761,0.979352392114111,0.330569830721956,0,1.02090169995667,0,1.39453664789186,51.9440372270556,20.2140808346574,41.2764997435959,14.9045688488766,24.358123778102,16.123207062041,3.86437194203376,19.7243935760624,7.90948561796815,1.14378116354295,9.21232048720802,9.41465773674625,27.3654793216306,10.20433232259,3.59744915166629,3.56898138656871,3.88780927740765,19.207335749465,14.2659289055707,10.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| ||
|short_description=p1@COL13A1 | |||
}} | }} |
Latest revision as of 01:16, 19 September 2015
Short description: | p1@COL13A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COL13A1_5end |
Coexpression cluster: | C3039_Pericytes_Smooth_alveolar_Fibroblast_fibrosarcoma_Lens_Meningeal |
Association with transcript: | 0bp_to_ENST00000354547, ENST00000357811, ENST00000398978, ENST00000479733_5end |
EntrezGene: | COL13A1 |
HGNC: | 2190 |
UniProt: | Q5TAT6E7EX21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.09e-24 | 121 |
smooth muscle cell | 7.92e-21 | 43 |
smooth muscle myoblast | 7.92e-21 | 43 |
fibroblast | 6.18e-20 | 76 |
muscle cell | 2.15e-19 | 55 |
muscle precursor cell | 2.42e-19 | 58 |
myoblast | 2.42e-19 | 58 |
multi-potent skeletal muscle stem cell | 2.42e-19 | 58 |
vascular associated smooth muscle cell | 8.07e-18 | 32 |
electrically responsive cell | 7.54e-17 | 61 |
electrically active cell | 7.54e-17 | 61 |
endothelial cell | 3.81e-12 | 36 |
endothelial cell of vascular tree | 1.14e-11 | 24 |
embryonic cell | 2.12e-11 | 250 |
blood vessel endothelial cell | 8.82e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.82e-10 | 18 |
meso-epithelial cell | 2.70e-09 | 45 |
cardiocyte | 1.72e-08 | 16 |
skin fibroblast | 1.32e-07 | 23 |
aortic smooth muscle cell | 1.70e-07 | 10 |
lining cell | 5.54e-07 | 58 |
barrier cell | 5.54e-07 | 58 |