FFCP PHASE1:Hg19::chr17:37356826..37356841,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6143 | |EntrezGene=6143 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10312 | |HGNC=10312 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWR8 | |UniProt=Q8IWR8 | ||
|association_with_transcript=231bp_to_uc002hrr.1_5end | |association_with_transcript=231bp_to_uc002hrr.1_5end | ||
|cluster_id=chr17:37356826..37356841,+ | |||
|description=CAGE_peak_4_at_RPL19_5end | |description=CAGE_peak_4_at_RPL19_5end | ||
|id=chr17:37356826..37356841,+ | |id=chr17:37356826..37356841,+ | ||
|ontology_enrichment_celltype=CL:0000548!6.92e-29!679;CL:0000004!6.92e-29!679;CL:0000255!6.92e-29!679;CL:0000012!2.04e-28!682;CL:0000066!1.32e-21!254;CL:0002321!3.42e-20!248;CL:0000220!5.75e-20!246;CL:0000003!3.71e-16!722;CL:0000222!9.83e-16!119;CL:0000144!2.03e-15!625;CL:0000063!2.09e-14!578;CL:0000076!6.21e-12!62;CL:0002371!5.80e-11!591;CL:0000213!1.32e-08!57;CL:0000215!1.32e-08!57;CL:0000192!1.77e-08!42;CL:0000514!1.77e-08!42;CL:0000680!3.11e-08!57;CL:0000056!3.11e-08!57;CL:0000355!3.11e-08!57;CL:0000187!6.62e-08!54;CL:0000359!8.72e-08!32;CL:0000183!1.72e-07!59;CL:0000393!1.91e-07!60;CL:0000211!1.91e-07!60;CL:0000055!3.06e-07!180;CL:0000071!3.36e-07!18;CL:0002546!3.36e-07!18 | |ontology_enrichment_celltype=CL:0000548!6.92e-29!679;CL:0000004!6.92e-29!679;CL:0000255!6.92e-29!679;CL:0000012!2.04e-28!682;CL:0000066!1.32e-21!254;CL:0002321!3.42e-20!248;CL:0000220!5.75e-20!246;CL:0000003!3.71e-16!722;CL:0000222!9.83e-16!119;CL:0000144!2.03e-15!625;CL:0000063!2.09e-14!578;CL:0000076!6.21e-12!62;CL:0002371!5.80e-11!591;CL:0000213!1.32e-08!57;CL:0000215!1.32e-08!57;CL:0000192!1.77e-08!42;CL:0000514!1.77e-08!42;CL:0000680!3.11e-08!57;CL:0000056!3.11e-08!57;CL:0000355!3.11e-08!57;CL:0000187!6.62e-08!54;CL:0000359!8.72e-08!32;CL:0000183!1.72e-07!59;CL:0000393!1.91e-07!60;CL:0000211!1.91e-07!60;CL:0000055!3.06e-07!180;CL:0000071!3.36e-07!18;CL:0002546!3.36e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000359;8.32e-08;32!CL:0000071;3.86e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.71e-19,250;CL:0000066,4.48e-18,253;CL:0000222,1.81e-16,121;CL:0000076,1.48e-12,63;CL:0000213,3.76e-09,58;CL:0000215,3.76e-09,58;CL:0000192,1.31e-08,43;CL:0000514,1.31e-08,43;CL:0000359,1.36e-08,32;CL:0000680,3.46e-08,58;CL:0000056,3.46e-08,58;CL:0000355,3.46e-08,58;CL:0000187,8.06e-08,55;CL:0000393,1.65e-07,61;CL:0000211,1.65e-07,61;CL:0000071,2.14e-07,18;CL:0002546,2.14e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;3.86e-07;18 | |||
|ontology_enrichment_disease=DOID:14566!6.92e-19!239;DOID:162!1.13e-17!235;DOID:0050686!3.93e-10!137;DOID:2531!8.40e-08!51;DOID:0060083!8.40e-08!51;DOID:305!1.90e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.01e-15,239;DOID:162,1.56e-14,235;DOID:0050686,9.74e-09,137;DOID:2531,3.47e-08,51;DOID:0060083,3.47e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0000490!9.99e-11!138;UBERON:0003104!1.25e-10!238;UBERON:0009142!1.25e-10!238;UBERON:0002100!1.83e-10!216;UBERON:0000055!5.11e-10!69;UBERON:0001981!5.80e-10!60;UBERON:0007500!5.80e-10!60;UBERON:0004537!5.80e-10!60;UBERON:0006965!5.80e-10!60;UBERON:0001637!1.20e-09!42;UBERON:0003509!1.20e-09!42;UBERON:0004572!1.20e-09!42;UBERON:0000486!4.57e-09!82;UBERON:0002049!5.48e-09!79;UBERON:0007798!5.48e-09!79;UBERON:0004290!8.49e-09!70;UBERON:0000914!1.21e-08!83;UBERON:0002329!1.21e-08!83;UBERON:0003077!1.21e-08!83;UBERON:0003059!1.21e-08!83;UBERON:0007282!1.21e-08!83;UBERON:0009618!1.21e-08!83;UBERON:0007285!1.21e-08!83;UBERON:0004872!1.82e-08!84;UBERON:0003914!2.65e-08!118;UBERON:0001737!1.51e-07!9;UBERON:0005256!1.54e-07!143;UBERON:0001134!2.65e-07!61;UBERON:0002036!2.65e-07!61;UBERON:0003082!2.65e-07!61;UBERON:0001986!3.36e-07!18;UBERON:0004638!3.36e-07!18;UBERON:0004852!3.36e-07!18;UBERON:0008947!4.55e-07!38;UBERON:0003258!4.55e-07!38;UBERON:0004573!4.95e-07!33;UBERON:0004571!4.95e-07!33 | |ontology_enrichment_uberon=UBERON:0000490!9.99e-11!138;UBERON:0003104!1.25e-10!238;UBERON:0009142!1.25e-10!238;UBERON:0002100!1.83e-10!216;UBERON:0000055!5.11e-10!69;UBERON:0001981!5.80e-10!60;UBERON:0007500!5.80e-10!60;UBERON:0004537!5.80e-10!60;UBERON:0006965!5.80e-10!60;UBERON:0001637!1.20e-09!42;UBERON:0003509!1.20e-09!42;UBERON:0004572!1.20e-09!42;UBERON:0000486!4.57e-09!82;UBERON:0002049!5.48e-09!79;UBERON:0007798!5.48e-09!79;UBERON:0004290!8.49e-09!70;UBERON:0000914!1.21e-08!83;UBERON:0002329!1.21e-08!83;UBERON:0003077!1.21e-08!83;UBERON:0003059!1.21e-08!83;UBERON:0007282!1.21e-08!83;UBERON:0009618!1.21e-08!83;UBERON:0007285!1.21e-08!83;UBERON:0004872!1.82e-08!84;UBERON:0003914!2.65e-08!118;UBERON:0001737!1.51e-07!9;UBERON:0005256!1.54e-07!143;UBERON:0001134!2.65e-07!61;UBERON:0002036!2.65e-07!61;UBERON:0003082!2.65e-07!61;UBERON:0001986!3.36e-07!18;UBERON:0004638!3.36e-07!18;UBERON:0004852!3.36e-07!18;UBERON:0008947!4.55e-07!38;UBERON:0003258!4.55e-07!38;UBERON:0004573!4.95e-07!33;UBERON:0004571!4.95e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.88e-08;42!UBERON:0003509;1.88e-08;42!UBERON:0004572;1.88e-08;42!UBERON:0001737;2.36e-08;9!UBERON:0001557;2.36e-08;9!UBERON:0004573;2.96e-07;33!UBERON:0004571;2.96e-07;33!UBERON:0004638;3.86e-07;18!UBERON:0001986;3.86e-07;18!UBERON:0004852;3.86e-07;18!UBERON:0000072;3.92e-07;37 | |||
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| ||
|short_description=p4@RPL19 | |short_description=p4@RPL19 | ||
}} | }} |
Latest revision as of 21:28, 19 September 2015
Short description: | p4@RPL19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RPL19_5end |
Coexpression cluster: | NA |
Association with transcript: | 231bp_to_uc002hrr.1_5end |
EntrezGene: | RPL19 |
HGNC: | 10312 |
UniProt: | Q8IWR8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.71e-19 | 250 |
epithelial cell | 4.48e-18 | 253 |
mesodermal cell | 1.81e-16 | 121 |
squamous epithelial cell | 1.48e-12 | 63 |
lining cell | 3.76e-09 | 58 |
barrier cell | 3.76e-09 | 58 |
smooth muscle cell | 1.31e-08 | 43 |
smooth muscle myoblast | 1.31e-08 | 43 |
vascular associated smooth muscle cell | 1.36e-08 | 32 |
muscle precursor cell | 3.46e-08 | 58 |
myoblast | 3.46e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.46e-08 | 58 |
muscle cell | 8.06e-08 | 55 |
electrically responsive cell | 1.65e-07 | 61 |
electrically active cell | 1.65e-07 | 61 |
blood vessel endothelial cell | 2.14e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.14e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.01e-15 | 239 |
cancer | 1.56e-14 | 235 |
organ system cancer | 9.74e-09 | 137 |
hematologic cancer | 3.47e-08 | 51 |
immune system cancer | 3.47e-08 | 51 |