FFCP PHASE1:Hg19::chr17:37824505..37824516,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5409 | |EntrezGene=5409 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9160 | |HGNC=9160 | ||
|TSSclassifier=strong | |||
|UniProt=P11086 | |UniProt=P11086 | ||
|association_with_transcript=0bp_to_ENST00000269582,NM_002686,uc002hsi.1_5end | |association_with_transcript=0bp_to_ENST00000269582,NM_002686,uc002hsi.1_5end | ||
|cluster_id=chr17:37824505..37824516,+ | |||
|coexpression_cluster_id=C477 | |||
|description=CAGE_peak_11_at_PNMT_5end | |description=CAGE_peak_11_at_PNMT_5end | ||
|id=chr17:37824505..37824516,+ | |id=chr17:37824505..37824516,+ | ||
|ontology_enrichment_celltype=CL:0002536!6.19e-10!2;CL:0000349!4.85e-07!3;CL:0002577!4.85e-07!3;CL:0002541!9.63e-07!3 | |ontology_enrichment_celltype=CL:0002536!6.19e-10!2;CL:0000349!4.85e-07!3;CL:0002577!4.85e-07!3;CL:0002541!9.63e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002577;7.81e-45;3!CL:0000349;2.58e-28;19!CL:0002536;1.17e-17;2!CL:0002569;7.17e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,7.81e-45,3;CL:0000349,2.67e-28,19;CL:0002536,1.27e-17,2;CL:0002569,7.17e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005754;5.05e-34;1!UBERON:0007297;9.07e-18;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.20e-18!14;UBERON:0000158!1.20e-18!14;UBERON:0000478!2.55e-16!24;UBERON:0003124!2.44e-15!7;UBERON:0006947!1.23e-13!3;UBERON:0004054!1.23e-13!3;UBERON:0005904!2.44e-10!4;UBERON:0001987!2.60e-10!4;UBERON:0004340!2.60e-10!4;UBERON:0007023!2.19e-08!115;UBERON:0004175!1.69e-07!25;UBERON:0000476!9.63e-07!3;UBERON:0000920!9.63e-07!3 | |ontology_enrichment_uberon=UBERON:0005631!1.20e-18!14;UBERON:0000158!1.20e-18!14;UBERON:0000478!2.55e-16!24;UBERON:0003124!2.44e-15!7;UBERON:0006947!1.23e-13!3;UBERON:0004054!1.23e-13!3;UBERON:0005904!2.44e-10!4;UBERON:0001987!2.60e-10!4;UBERON:0004340!2.60e-10!4;UBERON:0007023!2.19e-08!115;UBERON:0004175!1.69e-07!25;UBERON:0000476!9.63e-07!3;UBERON:0000920!9.63e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000998;5.05e-34;1!UBERON:0006868;5.05e-34;1!UBERON:0001987;5.98e-34;4!UBERON:0000478;1.42e-22;24!UBERON:0006947;2.59e-12;3!UBERON:0004054;2.59e-12;3!UBERON:0005904;1.44e-09;4!UBERON:0003422;7.17e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,5.05e-34,1;UBERON:0006868,5.05e-34,1;UBERON:0001987,5.98e-34,4;UBERON:0004340,5.98e-34,4;UBERON:0000478,1.46e-22,24;UBERON:0005631,6.67e-22,14;UBERON:0000158,6.67e-22,14;UBERON:0003124,6.48e-20,7;UBERON:0004175,1.13e-12,25;UBERON:0006947,2.59e-12,3;UBERON:0004054,2.59e-12,3;UBERON:0005904,1.44e-09,4;UBERON:0000995,2.60e-07,21;UBERON:0006554,4.50e-07,47;UBERON:0005795,5.09e-07,22;UBERON:0003975,5.09e-07,22;UBERON:0003133,6.12e-07,48;UBERON:0001008,6.12e-07,48;UBERON:0003422,7.17e-07,6 | |||
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| ||
|short_description=p11@PNMT | |short_description=p11@PNMT | ||
}} | }} |
Latest revision as of 22:28, 19 September 2015
Short description: | p11@PNMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PNMT_5end |
Coexpression cluster: | C477_Mesenchymal_Amniotic_Placental_chorionic_umbilical_Cardiac_acute |
Association with transcript: | 0bp_to_ENST00000269582, NM_002686, uc002hsi.1_5end |
EntrezGene: | PNMT |
HGNC: | 9160 |
UniProt: | P11086 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 7.81e-45 | 3 |
extraembryonic cell | 2.67e-28 | 19 |
amniotic epithelial cell | 1.27e-17 | 2 |
mesenchymal stem cell of umbilical cord | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 5.05e-34 | 1 |
seminal fluid secreting gland | 5.05e-34 | 1 |
placenta | 5.98e-34 | 4 |
allantois | 5.98e-34 | 4 |
extraembryonic structure | 1.46e-22 | 24 |
extraembryonic membrane | 6.67e-22 | 14 |
membranous layer | 6.67e-22 | 14 |
chorion | 6.48e-20 | 7 |
internal genitalia | 1.13e-12 | 25 |
male genital duct | 2.59e-12 | 3 |
internal male genitalia | 2.59e-12 | 3 |
duct of male reproductive system | 1.44e-09 | 4 |
uterus | 2.60e-07 | 21 |
urinary system structure | 4.50e-07 | 47 |
embryonic uterus | 5.09e-07 | 22 |
internal female genitalia | 5.09e-07 | 22 |
reproductive organ | 6.12e-07 | 48 |
renal system | 6.12e-07 | 48 |
mesenchyme of umbilical cord | 7.17e-07 | 6 |