FFCP PHASE1:Hg19::chr17:37934188..37934202,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22806 | |EntrezGene=22806 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13178 | |HGNC=13178 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=275bp_to_uc010wel.1_5end | |association_with_transcript=275bp_to_uc010wel.1_5end | ||
|cluster_id=chr17:37934188..37934202,- | |||
|coexpression_cluster_id=C1431 | |||
|description=CAGE_peak_8_at_IKZF3_5end | |description=CAGE_peak_8_at_IKZF3_5end | ||
|id=chr17:37934188..37934202,- | |id=chr17:37934188..37934202,- | ||
|ontology_enrichment_celltype=CL:0000542!2.39e-60!53;CL:0000051!2.39e-60!53;CL:0000838!1.01e-58!52;CL:0000945!6.47e-36!24;CL:0000826!6.47e-36!24;CL:0002087!1.88e-30!119;CL:0000738!4.56e-28!140;CL:0002031!1.35e-24!124;CL:0000236!3.23e-22!14;CL:0000791!5.17e-21!18;CL:0000789!5.17e-21!18;CL:0002420!5.17e-21!18;CL:0002419!5.17e-21!18;CL:0000790!5.17e-21!18;CL:0000988!2.11e-20!182;CL:0000084!4.46e-20!25;CL:0000827!4.46e-20!25;CL:0000037!1.17e-19!172;CL:0000566!1.17e-19!172;CL:0002032!2.26e-17!165;CL:0000837!2.26e-17!165;CL:0000625!7.55e-12!11;CL:0000624!8.52e-10!6;CL:0000080!1.24e-09!6 | |ontology_enrichment_celltype=CL:0000542!2.39e-60!53;CL:0000051!2.39e-60!53;CL:0000838!1.01e-58!52;CL:0000945!6.47e-36!24;CL:0000826!6.47e-36!24;CL:0002087!1.88e-30!119;CL:0000738!4.56e-28!140;CL:0002031!1.35e-24!124;CL:0000236!3.23e-22!14;CL:0000791!5.17e-21!18;CL:0000789!5.17e-21!18;CL:0002420!5.17e-21!18;CL:0002419!5.17e-21!18;CL:0000790!5.17e-21!18;CL:0000988!2.11e-20!182;CL:0000084!4.46e-20!25;CL:0000827!4.46e-20!25;CL:0000037!1.17e-19!172;CL:0000566!1.17e-19!172;CL:0002032!2.26e-17!165;CL:0000837!2.26e-17!165;CL:0000625!7.55e-12!11;CL:0000624!8.52e-10!6;CL:0000080!1.24e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.20e-67;24!CL:0000542;6.39e-42;53!CL:0000236;1.10e-37;13!CL:0000625;1.86e-13;11!CL:0000791;4.86e-13;18!CL:0000789;4.86e-13;18!CL:0002419;4.86e-13;18!CL:0000084;5.03e-11;25!CL:0002087;7.76e-11;104!CL:0000623;4.93e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,9.30e-76,53;CL:0000051,9.30e-76,53;CL:0000838,6.05e-73,52;CL:0000945,1.99e-67,24;CL:0000826,1.99e-67,24;CL:0000236,5.42e-41,14;CL:0002087,1.75e-31,115;CL:0000738,1.73e-28,136;CL:0002031,3.36e-26,120;CL:0000037,2.87e-21,168;CL:0000988,5.34e-21,177;CL:0002032,6.86e-20,161;CL:0000837,6.86e-20,161;CL:0000625,1.51e-13,11;CL:0000791,4.57e-13,18;CL:0000789,4.57e-13,18;CL:0002420,4.57e-13,18;CL:0002419,4.57e-13,18;CL:0000790,4.57e-13,18;CL:0000084,5.13e-11,25;CL:0000827,5.13e-11,25;CL:0000623,4.13e-10,3;CL:0000825,4.13e-10,3;CL:0000785,2.28e-08,2;CL:0000955,2.28e-08,2;CL:0000818,2.28e-08,2;CL:0000954,2.28e-08,2;CL:0000816,2.28e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;6.39e-42;53!CL:0000790;4.86e-13;18!CL:0000954;2.24e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!6.36e-11!10 | |ontology_enrichment_disease=DOID:0060058!6.36e-11!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;2.22e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.56e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.73e-19!15;UBERON:0000179!1.73e-19!15;UBERON:0000463!1.73e-19!15;UBERON:0004177!3.99e-11!7;UBERON:0007023!6.80e-09!115;UBERON:0003408!4.39e-07!10;UBERON:0002370!8.58e-07!4;UBERON:0005058!8.58e-07!4;UBERON:0009113!8.58e-07!4;UBERON:0003295!8.58e-07!4;UBERON:0005562!8.58e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.20e-09;15!UBERON:0000179;1.20e-09;15!UBERON:0000463;1.20e-09;15!UBERON:0002390;3.30e-08;32!UBERON:0002193;7.89e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.42e-09,15;UBERON:0000179,1.42e-09,15;UBERON:0000463,1.42e-09,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59143007015371,2.8735206307481,3.46327437780189,0,1.15148819429164,0.154816123316076,0,0,0,11.310211284724,13.9325847837673,0,0.553995408531877,0,0.651032612147555,0.447830948479849,0.971680998056939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,4.91524750135918,7.11607403090844,5.12076267079809,6.80673177961221,7.47178171940828,6.61044872784862,3.81621501814146,6.83055562931338,5.28513470433845,7.26319133437935,0,0,0,0.196709770113833,0.393010762749165,1.02800749499755,0.334372990781356,0.977766799900771,1.89379122293893,0,3.7879555340959,5.30290633454707,3.54454231333794,2.70803863765016,14.602410448727,10.7949258474699,0.328875809207352,0.552700035571697,0,0,0,0,0.793165398882963,0.766440987203842,3.09264700934367,2.02415753615602,2.22995790026868,1.30216690771284,0.950452044448374,1.95747654801105,1.91979916731628,0,1.89421801635213,3.28451198768419,0.604820229674197,1.33720097891754,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,1.97030760201927,1.2937654491571,1.66845947163673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,0.215714200818617,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,1.01489521846434,0.764637207142375,2.84823593587081,0.714695326373367,2.05681136543097,1.29694662238543,2.70015718619057,0.79312517629427,0,0,0,2.41544127663434,0,0.640276590135727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0,6.07824614168525,0,0,2.95403533106567,0,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,0.296521128680622,1.72989514525104,0.939797545549098,0,0,0,9.30519424999897,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581934098930517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.427149650270779,0,0,2.97699613087171,2.76656284657122,9.13444487856719,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19992437512958,0,5.16644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,4.14842355200805,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0.218559560503957,0,0,0,0,0,0,0,5.82700291475092,2.51385763096951,0.0999411559249289,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.968833647540092,0.682821857254437,0,0,0.202117188958219,0,0,8.21695046777968,0.932388670104793,0,0,0,0,0,0,0,0,0,4.42802345900258,3.8468219076388 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| ||
|short_description=p8@IKZF3 | |short_description=p8@IKZF3 | ||
}} | }} |
Latest revision as of 22:53, 19 September 2015
Short description: | p8@IKZF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_IKZF3_5end |
Coexpression cluster: | C1431_CD4_Burkitt_CD8_diffuse_tonsil_spleen_lymphoma |
Association with transcript: | 275bp_to_uc010wel.1_5end |
EntrezGene: | IKZF3 |
HGNC: | 13178 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 9.30e-76 | 53 |
common lymphoid progenitor | 9.30e-76 | 53 |
lymphoid lineage restricted progenitor cell | 6.05e-73 | 52 |
lymphocyte of B lineage | 1.99e-67 | 24 |
pro-B cell | 1.99e-67 | 24 |
B cell | 5.42e-41 | 14 |
nongranular leukocyte | 1.75e-31 | 115 |
leukocyte | 1.73e-28 | 136 |
hematopoietic lineage restricted progenitor cell | 3.36e-26 | 120 |
hematopoietic stem cell | 2.87e-21 | 168 |
hematopoietic cell | 5.34e-21 | 177 |
hematopoietic oligopotent progenitor cell | 6.86e-20 | 161 |
hematopoietic multipotent progenitor cell | 6.86e-20 | 161 |
CD8-positive, alpha-beta T cell | 1.51e-13 | 11 |
mature alpha-beta T cell | 4.57e-13 | 18 |
alpha-beta T cell | 4.57e-13 | 18 |
immature T cell | 4.57e-13 | 18 |
mature T cell | 4.57e-13 | 18 |
immature alpha-beta T cell | 4.57e-13 | 18 |
T cell | 5.13e-11 | 25 |
pro-T cell | 5.13e-11 | 25 |
natural killer cell | 4.13e-10 | 3 |
pro-NK cell | 4.13e-10 | 3 |
mature B cell | 2.28e-08 | 2 |
pre-B-II cell | 2.28e-08 | 2 |
transitional stage B cell | 2.28e-08 | 2 |
small pre-B-II cell | 2.28e-08 | 2 |
immature B cell | 2.28e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.42e-09 | 15 |
haemolymphatic fluid | 1.42e-09 | 15 |
organism substance | 1.42e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.56e-12 | 10 |