FFCP PHASE1:Hg19::chr11:1244288..1244302,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=727897 | |EntrezGene=727897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7516 | |HGNC=7516 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HC84,E9PBJ0,F5H4M9 | |UniProt=Q9HC84,E9PBJ0,F5H4M9 | ||
|association_with_transcript=0bp_to_ENST00000349637,ENST00000447027,ENST00000525715,ENST00000529681,ENST00000546052,NM_002458,uc001ltb.2,uc009yct.1_5end | |||
|cluster_id=chr11:1244288..1244302,+ | |||
|coexpression_cluster_id=C251 | |||
|description=CAGE_peak_1_at_MUC5B_5end | |||
|id=chr11:1244288..1244302,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006595;7.48e-10;86!UBERON:0001041;1.91e-08;30!UBERON:0008947;3.05e-07;29 | |||
|ontology_enrichment_disease=DOID:5093!2.06e-10!4;DOID:1612!2.06e-10!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.60e-14;4!DOID:1612;1.60e-14;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.75e-14,4;DOID:1612,1.75e-14,4 | |||
|ontology_enrichment_uberon=UBERON:0004921!4.83e-22!129;UBERON:0004185!4.83e-22!129;UBERON:0001007!7.85e-19!155;UBERON:0001555!7.85e-19!155;UBERON:0007026!7.85e-19!155;UBERON:0004119!2.15e-18!169;UBERON:0000925!2.15e-18!169;UBERON:0006595!2.15e-18!169;UBERON:0000077!7.37e-17!130;UBERON:0001041!1.48e-16!98;UBERON:0007023!3.47e-11!115;UBERON:0000065!1.11e-09!53;UBERON:0001004!3.97e-09!72;UBERON:0005409!1.44e-07!35;UBERON:0008947!5.45e-07!38;UBERON:0003258!5.45e-07!38;UBERON:0001557!5.75e-07!19;UBERON:0003127!6.10e-07!2;UBERON:0000341!9.73e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;5.50e-14;33!UBERON:0003127;2.01e-09;2!UBERON:0001041;3.08e-09;14!UBERON:0005409;3.14e-09;22!UBERON:0000341;4.03e-09;2!UBERON:0000059;1.78e-08;11!UBERON:0001829;1.93e-08;2!UBERON:0001555;3.77e-07;54!UBERON:0000915;4.11e-07;52!UBERON:0000160;5.10e-07;17!UBERON:0001155;6.67e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.03e-16,118;UBERON:0001007,1.12e-13,145;UBERON:0001555,1.12e-13,145;UBERON:0007026,1.12e-13,145;UBERON:0001041,1.11e-12,87;UBERON:0004119,8.87e-12,160;UBERON:0000925,8.87e-12,160;UBERON:0006595,8.87e-12,160;UBERON:0007023,5.79e-11,114;UBERON:0003127,2.01e-09,2;UBERON:0000915,2.43e-09,52;UBERON:0000341,3.95e-09,2;UBERON:0000059,1.74e-08,11;UBERON:0001829,2.08e-08,2;UBERON:0005409,5.01e-08,25;UBERON:0005178,1.40e-07,34;UBERON:0002224,1.40e-07,34;UBERON:0005181,2.56e-07,35;UBERON:0001004,3.83e-07,74;UBERON:0011216,4.13e-07,223;UBERON:0000160,5.01e-07,17;UBERON:0001155,6.51e-07,9 | |||
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| 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| ||
|short_description=p1@MUC5B | |||
}} | }} |
Latest revision as of 11:07, 16 September 2015
Short description: | p1@MUC5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MUC5B_5end |
Coexpression cluster: | C251_gall_tonsil_trachea_CD14_salivary_throat_tongue |
Association with transcript: | 0bp_to_ENST00000349637, ENST00000447027, ENST00000525715, ENST00000529681, ENST00000546052, NM_002458, uc001ltb.2, uc009yct.1_5end |
EntrezGene: | MUC5B |
HGNC: | 7516 |
UniProt: | Q9HC84E9PBJ0F5H4M9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 1.03e-16 | 118 |
digestive system | 1.12e-13 | 145 |
digestive tract | 1.12e-13 | 145 |
primitive gut | 1.12e-13 | 145 |
foregut | 1.11e-12 | 87 |
endoderm-derived structure | 8.87e-12 | 160 |
endoderm | 8.87e-12 | 160 |
presumptive endoderm | 8.87e-12 | 160 |
adult organism | 5.79e-11 | 114 |
open tracheal system trachea | 2.01e-09 | 2 |
thoracic segment of trunk | 2.43e-09 | 52 |
throat | 3.95e-09 | 2 |
large intestine | 1.74e-08 | 11 |
major salivary gland | 2.08e-08 | 2 |
gastrointestinal system | 5.01e-08 | 25 |
thoracic cavity element | 1.40e-07 | 34 |
thoracic cavity | 1.40e-07 | 34 |
thoracic segment organ | 2.56e-07 | 35 |
respiratory system | 3.83e-07 | 74 |
organ system subdivision | 4.13e-07 | 223 |
intestine | 5.01e-07 | 17 |
colon | 6.51e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.75e-14 | 4 |
breast cancer | 1.75e-14 | 4 |