FFCP PHASE1:Hg19::chr22:19939060..19939090,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1312 | |EntrezGene=1312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2228 | |HGNC=2228 | ||
|TSSclassifier=strong | |||
|UniProt=P21964 | |UniProt=P21964 | ||
|association_with_transcript=15bp_to_NM_001135162,uc002zqx.2_5end | |association_with_transcript=15bp_to_NM_001135162,uc002zqx.2_5end | ||
|cluster_id=chr22:19939060..19939090,+ | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_10_at_COMT_5end | |description=CAGE_peak_10_at_COMT_5end | ||
|id=chr22:19939060..19939090,+ | |id=chr22:19939060..19939090,+ | ||
|ontology_enrichment_celltype=CL:0000147!1.21e-19!14;CL:0000148!1.73e-12!10;CL:0000541!1.73e-12!10;CL:0000149!8.75e-10!4;CL:0002567!7.56e-09!3;CL:0000325!1.29e-07!39;CL:0002586!2.22e-07!3 | |ontology_enrichment_celltype=CL:0000147!1.21e-19!14;CL:0000148!1.73e-12!10;CL:0000541!1.73e-12!10;CL:0000149!8.75e-10!4;CL:0002567!7.56e-09!3;CL:0000325!1.29e-07!39;CL:0002586!2.22e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.31e-30;10!CL:0000147;1.27e-21;14!CL:0002567;7.41e-20;3!CL:0000710;7.22e-15;20!CL:0000075;7.41e-14;27!CL:0000182;1.72e-08;12!CL:0002566;1.07e-07;1!CL:0002077;1.59e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.28e-30,10;CL:0000541,1.28e-30,10;CL:0000147,1.26e-21,14;CL:0002567,7.42e-20,3;CL:0000710,7.15e-15,20;CL:0000075,8.03e-14,27;CL:0000182,1.72e-08,12;CL:0002077,2.27e-08,34;CL:0002566,1.03e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.87e-21!115;UBERON:0002346!8.60e-18!90;UBERON:0003075!1.03e-17!86;UBERON:0007284!1.03e-17!86;UBERON:0001049!6.32e-16!57;UBERON:0005068!6.32e-16!57;UBERON:0006241!6.32e-16!57;UBERON:0007135!6.32e-16!57;UBERON:0005743!1.16e-13!86;UBERON:0003056!8.63e-13!61;UBERON:0000073!1.04e-12!94;UBERON:0001016!1.04e-12!94;UBERON:0002616!3.20e-12!59;UBERON:0000955!1.61e-10!69;UBERON:0006238!1.61e-10!69;UBERON:0002298!2.92e-10!8;UBERON:0001017!4.93e-10!82;UBERON:0002780!1.64e-09!41;UBERON:0001890!1.64e-09!41;UBERON:0006240!1.64e-09!41;UBERON:0003080!3.35e-09!42;UBERON:0002020!3.69e-09!34;UBERON:0003528!3.69e-09!34;UBERON:0001893!5.07e-09!34;UBERON:0003076!6.91e-09!15;UBERON:0003057!6.91e-09!15;UBERON:0000033!7.00e-09!123;UBERON:0000153!3.86e-08!129;UBERON:0007811!3.86e-08!129;UBERON:0002791!5.92e-08!33;UBERON:0006331!6.87e-08!3;UBERON:0000966!9.44e-08!5;UBERON:0005388!9.44e-08!5;UBERON:0001802!9.44e-08!5;UBERON:0000988!1.09e-07!3;UBERON:0000924!1.17e-07!173;UBERON:0006601!1.17e-07!173;UBERON:0000025!1.49e-07!194;UBERON:0002619!1.96e-07!22;UBERON:0004121!1.99e-07!169;UBERON:0001781!2.22e-07!3;UBERON:0001782!2.22e-07!3;UBERON:0005424!2.22e-07!3;UBERON:0000991!2.23e-07!21;UBERON:0009196!2.23e-07!21;UBERON:0009117!2.23e-07!21;UBERON:0005564!2.23e-07!21;UBERON:0004176!5.79e-07!22;UBERON:0001869!6.14e-07!32;UBERON:0002107!6.53e-07!19;UBERON:0006925!6.53e-07!19;UBERON:0008836!6.53e-07!19;UBERON:0004111!6.91e-07!241;UBERON:0009854!8.08e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;2.26e-09;6!UBERON:0001896;8.91e-09;3!UBERON:0005290;8.91e-09;3!UBERON:0002107;4.83e-08;19!UBERON:0006925;4.83e-08;19!UBERON:0001301;1.89e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,2.26e-09,6;UBERON:0001896,9.66e-09,3;UBERON:0005290,9.66e-09,3;UBERON:0010096,9.66e-09,3;UBERON:0002107,4.87e-08,19;UBERON:0006925,4.87e-08,19;UBERON:0008836,4.87e-08,19;UBERON:0001301,1.95e-07,1;UBERON:0008835,6.62e-07,22;UBERON:0003894,6.62e-07,22 | |||
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| ||
|short_description=p10@COMT | |short_description=p10@COMT | ||
}} | }} |
Latest revision as of 04:03, 19 September 2015
Short description: | p10@COMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_COMT_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 15bp_to_NM_001135162, uc002zqx.2_5end |
EntrezGene: | COMT |
HGNC: | 2228 |
UniProt: | P21964 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.28e-30 | 10 |
melanoblast | 1.28e-30 | 10 |
pigment cell | 1.26e-21 | 14 |
light melanocyte | 7.42e-20 | 3 |
neurecto-epithelial cell | 7.15e-15 | 20 |
columnar/cuboidal epithelial cell | 8.03e-14 | 27 |
hepatocyte | 1.72e-08 | 12 |
ecto-epithelial cell | 2.27e-08 | 34 |
dark melanocyte | 1.03e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
brainstem | 2.26e-09 | 6 |
medulla oblongata | 9.66e-09 | 3 |
myelencephalon | 9.66e-09 | 3 |
future myelencephalon | 9.66e-09 | 3 |
liver | 4.87e-08 | 19 |
digestive gland | 4.87e-08 | 19 |
liver bud | 4.87e-08 | 19 |
epididymis | 1.95e-07 | 1 |
hepatic diverticulum | 6.62e-07 | 22 |
liver primordium | 6.62e-07 | 22 |