FFCP PHASE1:Hg19::chr17:42983816..42983830,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_U92979_5end | |association_with_transcript=40bp_to_U92979_5end | ||
|cluster_id=chr17:42983816..42983830,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_5_at_GFAP_5end | |description=CAGE_peak_5_at_GFAP_5end | ||
|id=chr17:42983816..42983830,- | |id=chr17:42983816..42983830,- | ||
|ontology_enrichment_celltype=CL:0000128!6.89e-11!7;CL:0000126!6.89e-11!7;CL:0000127!6.89e-11!7;CL:0002453!6.89e-11!7;CL:0002605!1.29e-10!3;CL:0002319!1.91e-07!25 | |ontology_enrichment_celltype=CL:0000128!6.89e-11!7;CL:0000126!6.89e-11!7;CL:0000127!6.89e-11!7;CL:0002453!6.89e-11!7;CL:0002605!1.29e-10!3;CL:0002319!1.91e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002605;6.15e-13;3!CL:0000128;3.36e-09;7!CL:0000126;3.36e-09;7!CL:0000127;3.36e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,6.27e-13,3;CL:0000128,3.29e-09,7;CL:0000126,3.29e-09,7;CL:0000127,3.29e-09,7;CL:0002453,3.29e-09,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.20e-19;82!UBERON:0006241;2.40e-13;3!UBERON:0003057;2.40e-13;3!UBERON:0006215;5.43e-12;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.32e-112!57;UBERON:0005068!1.32e-112!57;UBERON:0006241!1.32e-112!57;UBERON:0007135!1.32e-112!57;UBERON:0001017!1.43e-107!82;UBERON:0005743!4.45e-102!86;UBERON:0000073!6.08e-95!94;UBERON:0001016!6.08e-95!94;UBERON:0002616!1.44e-93!59;UBERON:0000955!3.40e-89!69;UBERON:0006238!3.40e-89!69;UBERON:0003075!1.89e-77!86;UBERON:0007284!1.89e-77!86;UBERON:0002780!9.41e-76!41;UBERON:0001890!9.41e-76!41;UBERON:0006240!9.41e-76!41;UBERON:0003080!9.02e-74!42;UBERON:0002346!1.70e-73!90;UBERON:0002020!9.35e-67!34;UBERON:0003528!9.35e-67!34;UBERON:0001893!2.97e-66!34;UBERON:0002791!9.60e-64!33;UBERON:0001869!2.54e-60!32;UBERON:0007023!1.31e-50!115;UBERON:0003056!2.78e-48!61;UBERON:0000033!9.29e-48!123;UBERON:0004121!1.08e-47!169;UBERON:0000924!2.65e-46!173;UBERON:0006601!2.65e-46!173;UBERON:0000153!5.25e-45!129;UBERON:0007811!5.25e-45!129;UBERON:0000956!4.22e-42!25;UBERON:0000203!4.22e-42!25;UBERON:0003076!8.35e-39!15;UBERON:0003057!8.35e-39!15;UBERON:0002619!7.94e-34!22;UBERON:0004732!2.81e-32!13;UBERON:0004733!1.25e-29!12;UBERON:0002028!1.25e-29!12;UBERON:0007277!1.25e-29!12;UBERON:0001950!1.13e-28!20;UBERON:0002308!8.45e-27!9;UBERON:0000125!8.45e-27!9;UBERON:0002420!2.37e-26!9;UBERON:0007245!2.37e-26!9;UBERON:0010009!2.37e-26!9;UBERON:0010011!2.37e-26!9;UBERON:0000454!2.37e-26!9;UBERON:0000025!3.03e-26!194;UBERON:0009663!8.83e-21!7;UBERON:0002680!1.37e-20!9;UBERON:0001895!1.37e-20!9;UBERON:0010092!1.37e-20!9;UBERON:0002298!1.04e-19!8;UBERON:0004111!8.53e-19!241;UBERON:0000477!8.67e-16!286;UBERON:0000349!1.72e-15!5;UBERON:0001871!1.05e-13!7;UBERON:0000483!1.16e-13!309;UBERON:0000119!2.05e-13!312;UBERON:0000064!5.00e-13!219;UBERON:0000200!1.09e-12!6;UBERON:0000369!2.43e-12!4;UBERON:0002435!2.43e-12!4;UBERON:0000204!2.43e-12!4;UBERON:0010082!2.43e-12!4;UBERON:0002037!3.63e-12!6;UBERON:0006215!3.63e-12!6;UBERON:0000475!6.12e-12!365;UBERON:0002240!5.82e-11!3;UBERON:0001896!6.01e-11!3;UBERON:0005290!6.01e-11!3;UBERON:0010096!6.01e-11!3;UBERON:0006331!8.28e-11!3;UBERON:0001894!9.05e-11!7;UBERON:0006222!9.05e-11!7;UBERON:0005174!1.41e-10!5;UBERON:0001137!1.41e-10!5;UBERON:0000988!2.01e-10!3;UBERON:0002771!3.20e-10!3;UBERON:0005383!9.62e-10!3;UBERON:0005382!9.62e-10!3;UBERON:0002021!1.79e-09!5;UBERON:0000062!4.77e-08!511;UBERON:0002148!9.87e-08!2;UBERON:0009662!9.87e-08!2;UBERON:0001897!1.70e-07!2;UBERON:0001954!2.63e-07!2;UBERON:0005162!2.63e-07!2;UBERON:0000122!2.63e-07!2;UBERON:0003022!2.63e-07!2;UBERON:0002421!2.63e-07!2;UBERON:0002600!2.63e-07!2;UBERON:0001876!2.89e-07!2;UBERON:0001875!4.32e-07!2;UBERON:0006514!4.32e-07!2;UBERON:0000922!4.34e-07!612;UBERON:0001873!6.03e-07!2;UBERON:0010122!6.03e-07!2;UBERON:0000923!8.35e-07!604;UBERON:0005291!8.35e-07!604;UBERON:0006598!8.35e-07!604;UBERON:0002532!8.35e-07!604;UBERON:0002050!9.05e-07!605;UBERON:0005423!9.05e-07!605 | |ontology_enrichment_uberon=UBERON:0001049!1.32e-112!57;UBERON:0005068!1.32e-112!57;UBERON:0006241!1.32e-112!57;UBERON:0007135!1.32e-112!57;UBERON:0001017!1.43e-107!82;UBERON:0005743!4.45e-102!86;UBERON:0000073!6.08e-95!94;UBERON:0001016!6.08e-95!94;UBERON:0002616!1.44e-93!59;UBERON:0000955!3.40e-89!69;UBERON:0006238!3.40e-89!69;UBERON:0003075!1.89e-77!86;UBERON:0007284!1.89e-77!86;UBERON:0002780!9.41e-76!41;UBERON:0001890!9.41e-76!41;UBERON:0006240!9.41e-76!41;UBERON:0003080!9.02e-74!42;UBERON:0002346!1.70e-73!90;UBERON:0002020!9.35e-67!34;UBERON:0003528!9.35e-67!34;UBERON:0001893!2.97e-66!34;UBERON:0002791!9.60e-64!33;UBERON:0001869!2.54e-60!32;UBERON:0007023!1.31e-50!115;UBERON:0003056!2.78e-48!61;UBERON:0000033!9.29e-48!123;UBERON:0004121!1.08e-47!169;UBERON:0000924!2.65e-46!173;UBERON:0006601!2.65e-46!173;UBERON:0000153!5.25e-45!129;UBERON:0007811!5.25e-45!129;UBERON:0000956!4.22e-42!25;UBERON:0000203!4.22e-42!25;UBERON:0003076!8.35e-39!15;UBERON:0003057!8.35e-39!15;UBERON:0002619!7.94e-34!22;UBERON:0004732!2.81e-32!13;UBERON:0004733!1.25e-29!12;UBERON:0002028!1.25e-29!12;UBERON:0007277!1.25e-29!12;UBERON:0001950!1.13e-28!20;UBERON:0002308!8.45e-27!9;UBERON:0000125!8.45e-27!9;UBERON:0002420!2.37e-26!9;UBERON:0007245!2.37e-26!9;UBERON:0010009!2.37e-26!9;UBERON:0010011!2.37e-26!9;UBERON:0000454!2.37e-26!9;UBERON:0000025!3.03e-26!194;UBERON:0009663!8.83e-21!7;UBERON:0002680!1.37e-20!9;UBERON:0001895!1.37e-20!9;UBERON:0010092!1.37e-20!9;UBERON:0002298!1.04e-19!8;UBERON:0004111!8.53e-19!241;UBERON:0000477!8.67e-16!286;UBERON:0000349!1.72e-15!5;UBERON:0001871!1.05e-13!7;UBERON:0000483!1.16e-13!309;UBERON:0000119!2.05e-13!312;UBERON:0000064!5.00e-13!219;UBERON:0000200!1.09e-12!6;UBERON:0000369!2.43e-12!4;UBERON:0002435!2.43e-12!4;UBERON:0000204!2.43e-12!4;UBERON:0010082!2.43e-12!4;UBERON:0002037!3.63e-12!6;UBERON:0006215!3.63e-12!6;UBERON:0000475!6.12e-12!365;UBERON:0002240!5.82e-11!3;UBERON:0001896!6.01e-11!3;UBERON:0005290!6.01e-11!3;UBERON:0010096!6.01e-11!3;UBERON:0006331!8.28e-11!3;UBERON:0001894!9.05e-11!7;UBERON:0006222!9.05e-11!7;UBERON:0005174!1.41e-10!5;UBERON:0001137!1.41e-10!5;UBERON:0000988!2.01e-10!3;UBERON:0002771!3.20e-10!3;UBERON:0005383!9.62e-10!3;UBERON:0005382!9.62e-10!3;UBERON:0002021!1.79e-09!5;UBERON:0000062!4.77e-08!511;UBERON:0002148!9.87e-08!2;UBERON:0009662!9.87e-08!2;UBERON:0001897!1.70e-07!2;UBERON:0001954!2.63e-07!2;UBERON:0005162!2.63e-07!2;UBERON:0000122!2.63e-07!2;UBERON:0003022!2.63e-07!2;UBERON:0002421!2.63e-07!2;UBERON:0002600!2.63e-07!2;UBERON:0001876!2.89e-07!2;UBERON:0001875!4.32e-07!2;UBERON:0006514!4.32e-07!2;UBERON:0000922!4.34e-07!612;UBERON:0001873!6.03e-07!2;UBERON:0010122!6.03e-07!2;UBERON:0000923!8.35e-07!604;UBERON:0005291!8.35e-07!604;UBERON:0006598!8.35e-07!604;UBERON:0002532!8.35e-07!604;UBERON:0002050!9.05e-07!605;UBERON:0005423!9.05e-07!605 | ||
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|short_description=p5@GFAP | |short_description=p5@GFAP | ||
}} | }} |
Latest revision as of 23:09, 24 September 2015
Short description: | p5@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 40bp_to_U92979_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 6.27e-13 | 3 |
oligodendrocyte | 3.29e-09 | 7 |
macroglial cell | 3.29e-09 | 7 |
astrocyte | 3.29e-09 | 7 |
oligodendrocyte precursor cell | 3.29e-09 | 7 |