FFCP PHASE1:Hg19::chr11:63993738..63993778,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84304 | |EntrezGene=84304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28189 | |HGNC=28189 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BRQ3,C9JY06,G3V1M6 | |UniProt=Q9BRQ3,C9JY06,G3V1M6 | ||
|association_with_transcript=0bp_to_ENST00000279206,ENST00000422364,ENST00000441250,ENST00000535000,ENST00000537707,ENST00000543358,NM_001128612,NM_001128613,NM_032344,uc001nyp.3,uc001nyq.3,uc009ypd.2,uc009ype.2_5end | |||
|cluster_id=chr11:63993738..63993778,+ | |||
|coexpression_cluster_id=C385 | |||
|description=CAGE_peak_1_at_NUDT22_5end | |||
|id=chr11:63993738..63993778,+ | |||
|ontology_enrichment_celltype=CL:0000192!2.47e-12!42;CL:0000514!2.47e-12!42;CL:0000359!2.09e-11!32;CL:0002371!5.28e-11!591;CL:0000183!1.11e-10!59;CL:0000187!4.11e-09!54;CL:0000680!4.29e-09!57;CL:0000056!4.29e-09!57;CL:0000355!4.29e-09!57;CL:0000055!1.85e-08!180;CL:0000144!1.50e-07!625;CL:0000393!1.83e-07!60;CL:0000211!1.83e-07!60;CL:0000548!2.51e-07!679;CL:0000004!2.51e-07!679;CL:0000255!2.51e-07!679;CL:0000220!2.83e-07!246;CL:0000003!4.55e-07!722;CL:0000222!5.23e-07!119;CL:0002321!7.51e-07!248;CL:0000012!8.04e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.39e-11;32!CL:0000192;3.27e-09;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.04e-12,43;CL:0000514,3.04e-12,43;CL:0000359,2.09e-11,32;CL:0000187,4.28e-09,55;CL:0000680,4.42e-09,58;CL:0000056,4.42e-09,58;CL:0000355,4.42e-09,58;CL:0000393,1.81e-07,61;CL:0000211,1.81e-07,61;CL:0000222,5.03e-07,121;CL:0002321,6.79e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;3.27e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!4.45e-11!216;UBERON:0005256!8.70e-11!143;UBERON:0000486!1.09e-10!82;UBERON:0001637!1.67e-10!42;UBERON:0003509!1.67e-10!42;UBERON:0004572!1.67e-10!42;UBERON:0004290!2.07e-10!70;UBERON:0000914!1.07e-09!83;UBERON:0002329!1.07e-09!83;UBERON:0003077!1.07e-09!83;UBERON:0003059!1.07e-09!83;UBERON:0007282!1.07e-09!83;UBERON:0009618!1.07e-09!83;UBERON:0007285!1.07e-09!83;UBERON:0001134!5.93e-09!61;UBERON:0002036!5.93e-09!61;UBERON:0003082!5.93e-09!61;UBERON:0002385!6.62e-09!63;UBERON:0001015!6.62e-09!63;UBERON:0000383!6.62e-09!63;UBERON:0004573!1.66e-08!33;UBERON:0004571!1.66e-08!33;UBERON:0003914!1.80e-08!118;UBERON:0004872!4.53e-08!84;UBERON:0003104!9.85e-08!238;UBERON:0009142!9.85e-08!238;UBERON:0001981!1.78e-07!60;UBERON:0007500!1.78e-07!60;UBERON:0004537!1.78e-07!60;UBERON:0006965!1.78e-07!60;UBERON:0000490!2.67e-07!138;UBERON:0009569!7.09e-07!113;UBERON:0001009!9.26e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.13e-07;33!UBERON:0004571;1.13e-07;33!UBERON:0001637;1.94e-07;42!UBERON:0003509;1.94e-07;42!UBERON:0004572;1.94e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,5.58e-12,78;UBERON:0002100,2.46e-11,199;UBERON:0000486,1.09e-10,83;UBERON:0001637,1.67e-10,42;UBERON:0003509,1.67e-10,42;UBERON:0004572,1.67e-10,42;UBERON:0002329,2.11e-10,71;UBERON:0003059,2.11e-10,71;UBERON:0007282,2.11e-10,71;UBERON:0004290,2.11e-10,71;UBERON:0009618,2.11e-10,71;UBERON:0003104,6.26e-10,160;UBERON:0009142,6.26e-10,160;UBERON:0003077,6.67e-10,72;UBERON:0007285,6.67e-10,72;UBERON:0007524,8.27e-10,73;UBERON:0005256,1.71e-09,122;UBERON:0001134,6.03e-09,62;UBERON:0002036,6.03e-09,62;UBERON:0003082,6.03e-09,62;UBERON:0002385,6.69e-09,64;UBERON:0001015,6.69e-09,64;UBERON:0000383,6.69e-09,64;UBERON:0000490,1.43e-08,148;UBERON:0004573,1.66e-08,33;UBERON:0004571,1.66e-08,33;UBERON:0003914,1.91e-08,117;UBERON:0004872,7.17e-08,83;UBERON:0007500,2.88e-07,59;UBERON:0001981,2.88e-07,59;UBERON:0004537,2.88e-07,59;UBERON:0006965,2.88e-07,59;UBERON:0006554,4.61e-07,47 | |||
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| ||
|short_description=p1@NUDT22 | |||
}} | }} |
Latest revision as of 01:26, 19 September 2015
Short description: | p1@NUDT22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NUDT22_5end |
Coexpression cluster: | C385_Mesenchymal_Alveolar_Osteoblast_Smooth_Renal_Placental_Fibroblast |
Association with transcript: | 0bp_to_ENST00000279206, ENST00000422364, ENST00000441250, ENST00000535000, ENST00000537707, ENST00000543358, NM_001128612, NM_001128613, NM_032344, uc001nyp.3, uc001nyq.3, uc009ypd.2, uc009ype.2_5end |
EntrezGene: | NUDT22 |
HGNC: | 28189 |
UniProt: | Q9BRQ3C9JY06G3V1M6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.04e-12 | 43 |
smooth muscle myoblast | 3.04e-12 | 43 |
vascular associated smooth muscle cell | 2.09e-11 | 32 |
muscle cell | 4.28e-09 | 55 |
muscle precursor cell | 4.42e-09 | 58 |
myoblast | 4.42e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.42e-09 | 58 |
electrically responsive cell | 1.81e-07 | 61 |
electrically active cell | 1.81e-07 | 61 |
mesodermal cell | 5.03e-07 | 121 |
embryonic cell | 6.79e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 5.58e-12 | 78 |
trunk | 2.46e-11 | 199 |
multilaminar epithelium | 1.09e-10 | 83 |
artery | 1.67e-10 | 42 |
arterial blood vessel | 1.67e-10 | 42 |
arterial system | 1.67e-10 | 42 |
somite | 2.11e-10 | 71 |
presomitic mesoderm | 2.11e-10 | 71 |
presumptive segmental plate | 2.11e-10 | 71 |
dermomyotome | 2.11e-10 | 71 |
trunk paraxial mesoderm | 2.11e-10 | 71 |
mesenchyme | 6.26e-10 | 160 |
entire embryonic mesenchyme | 6.26e-10 | 160 |
paraxial mesoderm | 6.67e-10 | 72 |
presumptive paraxial mesoderm | 6.67e-10 | 72 |
dense mesenchyme tissue | 8.27e-10 | 73 |
trunk mesenchyme | 1.71e-09 | 122 |
skeletal muscle tissue | 6.03e-09 | 62 |
striated muscle tissue | 6.03e-09 | 62 |
myotome | 6.03e-09 | 62 |
muscle tissue | 6.69e-09 | 64 |
musculature | 6.69e-09 | 64 |
musculature of body | 6.69e-09 | 64 |
unilaminar epithelium | 1.43e-08 | 148 |
systemic artery | 1.66e-08 | 33 |
systemic arterial system | 1.66e-08 | 33 |
epithelial tube | 1.91e-08 | 117 |
splanchnic layer of lateral plate mesoderm | 7.17e-08 | 83 |
epithelial tube open at both ends | 2.88e-07 | 59 |
blood vessel | 2.88e-07 | 59 |
blood vasculature | 2.88e-07 | 59 |
vascular cord | 2.88e-07 | 59 |
urinary system structure | 4.61e-07 | 47 |