FFCP PHASE1:Hg19::chr17:46626828..46626840,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-406bp_to_ENST00000465846_5end | |association_with_transcript=-406bp_to_ENST00000465846_5end | ||
|cluster_id=chr17:46626828..46626840,+ | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_2_at_ENST00000465846_5end | |description=CAGE_peak_2_at_ENST00000465846_5end | ||
|id=chr17:46626828..46626840,+ | |id=chr17:46626828..46626840,+ | ||
|ontology_enrichment_celltype=CL:0002322!6.32e-17!5;CL:0000039!1.09e-08!7;CL:0000586!1.09e-08!7;CL:0002600!4.46e-08!2;CL:0000128!1.62e-07!7;CL:0000126!1.62e-07!7;CL:0000127!1.62e-07!7;CL:0002453!1.62e-07!7 | |ontology_enrichment_celltype=CL:0002322!6.32e-17!5;CL:0000039!1.09e-08!7;CL:0000586!1.09e-08!7;CL:0002600!4.46e-08!2;CL:0000128!1.62e-07!7;CL:0000126!1.62e-07!7;CL:0000127!1.62e-07!7;CL:0002453!1.62e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.92e-43;7!CL:0000586;3.92e-43;7!CL:0000322;2.89e-12;3!CL:0002582;2.89e-12;3!CL:0002322;7.01e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.92e-43,7;CL:0000586,3.92e-43,7;CL:0002582,2.59e-12,3;CL:0000322,2.89e-12,3;CL:0002322,7.49e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.68e-30;10!UBERON:0005564;1.68e-30;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;1.07e-17;2!DOID:3095;2.38e-14;22!DOID:2994;2.38e-14;22!DOID:3908;7.01e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.07e-17,2;DOID:3095,2.38e-14,22;DOID:2994,2.38e-14,22;DOID:3908,7.01e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0003135!1.08e-14!11;UBERON:0000473!5.78e-11!8;UBERON:0003101!1.02e-08!22;UBERON:0000079!1.02e-08!22;UBERON:0003126!8.98e-08!7;UBERON:0001005!8.98e-08!7;UBERON:0003127!3.40e-07!2 | |ontology_enrichment_uberon=UBERON:0003135!1.08e-14!11;UBERON:0000473!5.78e-11!8;UBERON:0003101!1.02e-08!22;UBERON:0000079!1.02e-08!22;UBERON:0003126!8.98e-08!7;UBERON:0001005!8.98e-08!7;UBERON:0003127!3.40e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.14e-38;8!UBERON:0003135;8.12e-28;11!UBERON:0004903;1.07e-17;2!UBERON:0002173;1.07e-17;2!UBERON:0002186;1.07e-17;2!UBERON:0000991;5.40e-15;21!UBERON:0003101;2.38e-14;22!UBERON:0000079;2.38e-14;22!UBERON:0004821;2.89e-12;3!UBERON:0007499;2.89e-12;3!UBERON:0003215;2.89e-12;3!UBERON:0010368;2.89e-12;3!UBERON:0009911;2.89e-12;3!UBERON:0002299;2.89e-12;3!UBERON:0006524;2.89e-12;3!UBERON:0008874;2.89e-12;3!UBERON:0002169;2.89e-12;3!UBERON:0004894;2.89e-12;3!UBERON:0000922;1.33e-10;49!UBERON:0009856;1.57e-09;4!UBERON:0002323;2.04e-07;45!UBERON:0003133;6.95e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.14e-38,8;UBERON:0003135,8.12e-28,11;UBERON:0004903,1.07e-17,2;UBERON:0002173,1.07e-17,2;UBERON:0002186,1.07e-17,2;UBERON:0000991,5.40e-15,21;UBERON:0009196,5.40e-15,21;UBERON:0009117,5.40e-15,21;UBERON:0005564,5.40e-15,21;UBERON:0004176,2.38e-14,22;UBERON:0003101,2.38e-14,22;UBERON:0000079,2.38e-14,22;UBERON:0004821,2.89e-12,3;UBERON:0003215,2.89e-12,3;UBERON:0010368,2.89e-12,3;UBERON:0009911,2.89e-12,3;UBERON:0002299,2.89e-12,3;UBERON:0006524,2.89e-12,3;UBERON:0008874,2.89e-12,3;UBERON:0002169,2.89e-12,3;UBERON:0004894,2.89e-12,3;UBERON:0002323,3.06e-07,46;UBERON:0003133,5.76e-07,48;UBERON:0004458,7.75e-07,49 | |||
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| ||
|short_description=p2@ENST00000465846 | |short_description=p2@ENST00000465846 | ||
}} | }} |
Latest revision as of 18:07, 25 July 2015
Short description: | p2@ENST00000465846 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000465846_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | -406bp_to_ENST00000465846_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.92e-43 | 7 |
germ cell | 3.92e-43 | 7 |
visceral preadipocyte | 2.59e-12 | 3 |
pneumocyte | 2.89e-12 | 3 |
embryonic stem cell | 7.49e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 7.14e-38 | 8 |
male reproductive organ | 8.12e-28 | 11 |
bronchoalveolar duct junction | 1.07e-17 | 2 |
alveolar duct | 1.07e-17 | 2 |
bronchiole | 1.07e-17 | 2 |
gonad | 5.40e-15 | 21 |
indifferent external genitalia | 5.40e-15 | 21 |
indifferent gonad | 5.40e-15 | 21 |
gonad primordium | 5.40e-15 | 21 |
external genitalia | 2.38e-14 | 22 |
male organism | 2.38e-14 | 22 |
male reproductive system | 2.38e-14 | 22 |
pulmonary alveolus epithelium | 2.89e-12 | 3 |
alveolus | 2.89e-12 | 3 |
pulmonary lobule | 2.89e-12 | 3 |
lobule | 2.89e-12 | 3 |
alveolus of lung | 2.89e-12 | 3 |
alveolar system | 2.89e-12 | 3 |
pulmonary acinus | 2.89e-12 | 3 |
alveolar sac | 2.89e-12 | 3 |
alveolar wall | 2.89e-12 | 3 |
body cavity | 3.06e-07 | 46 |
reproductive organ | 5.76e-07 | 48 |
body cavity or lining | 7.75e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.07e-17 | 2 |
germ cell and embryonal cancer | 2.38e-14 | 22 |
germ cell cancer | 2.38e-14 | 22 |
non-small cell lung carcinoma | 7.01e-08 | 5 |