FFCP PHASE1:Hg19::chr17:48262424..48262433,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:48262424..48262433,- | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr17:48262424..48262433,- | |description=CAGE_peak_at_chr17:48262424..48262433,- | ||
|id=chr17:48262424..48262433,- | |id=chr17:48262424..48262433,- | ||
|ontology_enrichment_celltype=CL:0000055!5.14e-30!180;CL:0000057!1.25e-17!75;CL:0000183!3.66e-14!59;CL:0000048!3.58e-13!430;CL:0000680!1.52e-12!57;CL:0000056!1.52e-12!57;CL:0000355!1.52e-12!57;CL:0000723!2.19e-12!436;CL:0000187!2.65e-12!54;CL:0000034!1.05e-11!444;CL:0000393!1.31e-10!60;CL:0000211!1.31e-10!60;CL:0002371!5.39e-10!591;CL:0000192!6.87e-10!42;CL:0000514!6.87e-10!42;CL:0000144!1.35e-08!625;CL:0000499!1.41e-07!27;CL:0000327!2.45e-07!14 | |ontology_enrichment_celltype=CL:0000055!5.14e-30!180;CL:0000057!1.25e-17!75;CL:0000183!3.66e-14!59;CL:0000048!3.58e-13!430;CL:0000680!1.52e-12!57;CL:0000056!1.52e-12!57;CL:0000355!1.52e-12!57;CL:0000723!2.19e-12!436;CL:0000187!2.65e-12!54;CL:0000034!1.05e-11!444;CL:0000393!1.31e-10!60;CL:0000211!1.31e-10!60;CL:0002371!5.39e-10!591;CL:0000192!6.87e-10!42;CL:0000514!6.87e-10!42;CL:0000144!1.35e-08!625;CL:0000499!1.41e-07!27;CL:0000327!2.45e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0002570;9.19e-10;8!CL:0000134;9.97e-09;55!CL:0000048;2.72e-08;58!CL:0000723;3.37e-08;61!CL:0002569;6.14e-08;6!CL:0002320;3.15e-07;188!CL:0000135;4.16e-07;3!CL:0000388;4.16e-07;3!CL:0002580;5.35e-07;3!CL:0000632;5.89e-07;3!CL:0000057;7.68e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.42e-14,76;CL:0000048,2.38e-11,427;CL:0000723,6.95e-11,433;CL:0000034,2.75e-10,441;CL:0002320,7.91e-10,361;CL:0002570,1.56e-09,8;CL:0000134,3.01e-09,354;CL:0000136,2.55e-08,15;CL:0002569,4.16e-08,6;CL:0000219,8.64e-08,386;CL:0000135,4.67e-07,3;CL:0000388,4.67e-07,3;CL:0000632,5.66e-07,3;CL:0002580,5.88e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!8.92e-09!14 | |ontology_enrichment_disease=DOID:2394!8.92e-09!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!6.17e-13!61;UBERON:0002036!6.17e-13!61;UBERON:0003082!6.17e-13!61;UBERON:0002385!4.13e-12!63;UBERON:0001015!4.13e-12!63;UBERON:0000383!4.13e-12!63;UBERON:0000914!2.11e-11!83;UBERON:0002329!2.11e-11!83;UBERON:0003077!2.11e-11!83;UBERON:0003059!2.11e-11!83;UBERON:0007282!2.11e-11!83;UBERON:0009618!2.11e-11!83;UBERON:0007285!2.11e-11!83;UBERON:0004290!3.19e-10!70;UBERON:0000486!5.51e-08!82;UBERON:0005256!8.13e-08!143;UBERON:0002384!9.75e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0003104;2.13e-09;7!UBERON:0009142;2.13e-09;7!UBERON:0003688;1.53e-08;6!UBERON:0002358;1.53e-08;6!UBERON:0003684;1.53e-08;6!UBERON:0001178;1.53e-08;6!UBERON:0001013;2.56e-08;14!UBERON:0003422;6.14e-08;6!UBERON:0007846;4.16e-07;3!UBERON:0000043;4.16e-07;3!UBERON:0007845;4.16e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.94e-10,371;UBERON:0003688,1.74e-08,6;UBERON:0002358,1.74e-08,6;UBERON:0003684,1.74e-08,6;UBERON:0001178,1.74e-08,6;UBERON:0001013,2.75e-08,14;UBERON:0003422,4.16e-08,6;UBERON:0007846,4.67e-07,3;UBERON:0000043,4.67e-07,3;UBERON:0007845,4.67e-07,3 | |||
|phase1_expression=3.45188920614058,1.49870366723688,3.24195129420734,3.00219895059391,3.5756887554183,1.74467704820074,2.53299878168311,0,0.261185628199839,0,0,0.218441372130172,1.84636884759917,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0.975865597581014,1.10808952269109,0.612002073732759,0.940364164434263,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.79007586580942,1.0843174571537,3.50936537445123,0.869079113764942,2.3858578411533,7.29952305453954,0.756278537312543,0.886917589850256,0.43917392846563,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.46063537203914,1.51956613997496,0.132409180813219,1.43418310374407,0.709336764396714,1.68203280042692,3.20246987189115,1.2333377420858,0.933633106199299,0.134710672069688,0.163461903113459,2.4217188423189,0,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0,4.75201142912821,3.70900393917835,0,2.15585442544872,0.336672227908132,0,0,3.95079858792754,2.45190236639216,2.40380894250555,1.36118619792025,0.717558542755448,3.84403299873421,4.87443372666992,0.900273288253207,1.23663035086127,0.515281080091258,1.30281799432113,2.19409231913646,0.292311015483596,0.252433774244115,2.11714766877288,0.646584227275248,1.06502877754984,0.705264687593482,0.67824236924195,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0.217879444092406,0,0,0,0,0,1.40241773803446,4.115740113314,7.3504355692771,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.34779121492523,0.821860859650752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0.43596006883328,0.66004457238855,1.80980402060889,0,1.690605505112,0.797814349754612,0,0.257207374262142,0,0.799266537048298,2.28764789853036,14.1081617401775,2.46972101034231,1.30294473717494,4.6200953336531,0,0.301439377059586,0,0.199945982364114,0,0,0,4.0736225433569,3.44585807502342,0,0.434343920002738,0.205476322550383,0,0,0,0,0,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0.271265023699736,4.99130067673937,2.67643483195743,1.73472656537328,1.05427273493442,2.40756879782175,0,0,2.65690239414175,0.553107505625109,0.0868836144680828,2.93701736194111,4.11772108573027,0,0,0,0,1.66435439510497,0.30239029332968,5.45837177201309,3.37616341233737,7.29716245525991,6.66323576129645,0,9.49038134747284,0,0.154209693802656,0.887808626565635,0.246381468041427,0,0.232420756919918,0,0,0,1.37777337797528,0,0.393373244878272,0,0,1.56869953835371,0,0,0,0,0,1.54227252690289,1.08378575017541,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0.183138929636687,0.330037999682352,0,0,0,0.193341436584244,0,0.767518373630648,0.137836572484531,1.6113036730241,0.145016693914229,0.170453254832202,1.86967274858148,0,0,0,0,0.464845549297286,1.25924938732256,0,0.308033580176089,0,0.869932992075073,0.18532421910392,0,0.372158369359667,0.632758849437452,1.71567174531442,2.303080121802,0.42793898803392,0.318203247925937,1.56989728039846,2.15846949099978,1.64722217841633,1.41374882814824,0.404364963146632,0,0.842516912477962,3.41343617362713,0.487426979262569,0,0.409499734223957,1.1312434556297,0,0.551365343546124,0,0,1.15755106853338,0.655894752046633,0.405820753925408,0,0.563391205064483,0.430234056612155,2.06322986127554,1.426684205925,0,0.211107635297664,0.329294892959902,1.13841952129715,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48831670129446,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0.31900115973192,1.09917112082235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0,1.35588444468319,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,3.43812353135966,0,0.279282401272254,0,0,0,0,0,0.201550417460179,3.60299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.209818352539992,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13435086062435,2.33713309847224,1.10961172300523,0.757612021100357,0.754703705257725,2.66943366478961,0,1.36107831386915,2.33155800874171,0.591420599958536,0.955780602982214,0,1.86315548251511,0.414706207840855,2.65841714557995,1.5652351854352,7.3626228408637,0.761610424337591,1.22061219961398,1.45478927362048,1.71856891267982,0.464033759878494,2.3885753321917,0.400027764663154,2.40376993627955,2.02049693259551,0,0,0,0,0.453411851024545,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,1.31043939538565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45206090914786,0,0,2.1160556621441,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0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| ||
|short_description=p@chr17:48262424..48262433,- | |short_description=p@chr17:48262424..48262433,- | ||
}} | }} |
Latest revision as of 18:29, 25 July 2015
Short description: | p@chr17:48262424..48262433, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48262424..48262433, - |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.42e-14 | 76 |
multi fate stem cell | 2.38e-11 | 427 |
somatic stem cell | 6.95e-11 | 433 |
stem cell | 2.75e-10 | 441 |
connective tissue cell | 7.91e-10 | 361 |
mesenchymal stem cell of adipose | 1.56e-09 | 8 |
mesenchymal cell | 3.01e-09 | 354 |
fat cell | 2.55e-08 | 15 |
mesenchymal stem cell of umbilical cord | 4.16e-08 | 6 |
motile cell | 8.64e-08 | 386 |
fibrocyte | 4.67e-07 | 3 |
tendon cell | 4.67e-07 | 3 |
hepatic stellate cell | 5.66e-07 | 3 |
preadipocyte of the breast | 5.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.94e-10 | 371 |
omentum | 1.74e-08 | 6 |
peritoneum | 1.74e-08 | 6 |
abdominal cavity | 1.74e-08 | 6 |
visceral peritoneum | 1.74e-08 | 6 |
adipose tissue | 2.75e-08 | 14 |
mesenchyme of umbilical cord | 4.16e-08 | 6 |
dense regular connective tissue | 4.67e-07 | 3 |
tendon | 4.67e-07 | 3 |
regular connective tissue | 4.67e-07 | 3 |