FFCP PHASE1:Hg19::chr22:43023683..43023702,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:43023683..43023702,- | |||
|coexpression_cluster_id=C2647 | |||
|description=CAGE_peak_at_chr22:43023683..43023702,- | |description=CAGE_peak_at_chr22:43023683..43023702,- | ||
|id=chr22:43023683..43023702,- | |id=chr22:43023683..43023702,- | ||
|ontology_enrichment_celltype=CL:0000055!5.47e-16!180;CL:0000057!2.64e-14!75;CL:0002371!1.68e-10!591;CL:0000048!1.39e-08!430;CL:0000723!3.06e-08!436;CL:0000144!1.01e-07!625;CL:0000034!2.48e-07!444;CL:0000192!7.22e-07!42;CL:0000514!7.22e-07!42;CL:0000183!9.14e-07!59 | |ontology_enrichment_celltype=CL:0000055!5.47e-16!180;CL:0000057!2.64e-14!75;CL:0002371!1.68e-10!591;CL:0000048!1.39e-08!430;CL:0000723!3.06e-08!436;CL:0000144!1.01e-07!625;CL:0000034!2.48e-07!444;CL:0000192!7.22e-07!42;CL:0000514!7.22e-07!42;CL:0000183!9.14e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000057;1.88e-07;73!CL:0002334;7.09e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.56e-16,76;CL:0000048,1.18e-10,427;CL:0000723,6.28e-10,433;CL:0000034,5.18e-09,441;CL:0000192,3.83e-07,43;CL:0000514,3.83e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.54e-09!659;UBERON:0005256!8.13e-08!143;UBERON:0000914!1.01e-07!83;UBERON:0002329!1.01e-07!83;UBERON:0003077!1.01e-07!83;UBERON:0003059!1.01e-07!83;UBERON:0007282!1.01e-07!83;UBERON:0009618!1.01e-07!83;UBERON:0007285!1.01e-07!83;UBERON:0003102!2.38e-07!95;UBERON:0004290!5.72e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.87e-07;6!UBERON:0002358;1.87e-07;6!UBERON:0003684;1.87e-07;6!UBERON:0001178;1.87e-07;6!UBERON:0004457;2.53e-07;9!UBERON:0000042;2.53e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,9.80e-09,78;UBERON:0005256,4.30e-08,122;UBERON:0002049,5.44e-08,78;UBERON:0007798,5.44e-08,78;UBERON:0000926,8.86e-08,315;UBERON:0004120,8.86e-08,315;UBERON:0006603,8.86e-08,315;UBERON:0000055,1.76e-07,68;UBERON:0003688,2.25e-07,6;UBERON:0002358,2.25e-07,6;UBERON:0003684,2.25e-07,6;UBERON:0001178,2.25e-07,6;UBERON:0003104,3.02e-07,160;UBERON:0009142,3.02e-07,160;UBERON:0007524,3.36e-07,73;UBERON:0002329,4.77e-07,71;UBERON:0003059,4.77e-07,71;UBERON:0007282,4.77e-07,71;UBERON:0004290,4.77e-07,71;UBERON:0009618,4.77e-07,71;UBERON:0003077,8.33e-07,72;UBERON:0007285,8.33e-07,72 | |||
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| ||
|short_description=p@chr22:43023683..43023702,- | |short_description=p@chr22:43023683..43023702,- | ||
}} | }} |
Latest revision as of 21:48, 28 July 2015
Short description: | p@chr22:43023683..43023702, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:43023683..43023702, - |
Coexpression cluster: | C2647_Adipocyte_Preadipocyte_tenocyte_Osteoblast_basal_Mesenchymal_Olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.56e-16 | 76 |
multi fate stem cell | 1.18e-10 | 427 |
somatic stem cell | 6.28e-10 | 433 |
stem cell | 5.18e-09 | 441 |
smooth muscle cell | 3.83e-07 | 43 |
smooth muscle myoblast | 3.83e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 9.80e-09 | 78 |
trunk mesenchyme | 4.30e-08 | 122 |
vasculature | 5.44e-08 | 78 |
vascular system | 5.44e-08 | 78 |
mesoderm | 8.86e-08 | 315 |
mesoderm-derived structure | 8.86e-08 | 315 |
presumptive mesoderm | 8.86e-08 | 315 |
vessel | 1.76e-07 | 68 |
omentum | 2.25e-07 | 6 |
peritoneum | 2.25e-07 | 6 |
abdominal cavity | 2.25e-07 | 6 |
visceral peritoneum | 2.25e-07 | 6 |
mesenchyme | 3.02e-07 | 160 |
entire embryonic mesenchyme | 3.02e-07 | 160 |
dense mesenchyme tissue | 3.36e-07 | 73 |
somite | 4.77e-07 | 71 |
presomitic mesoderm | 4.77e-07 | 71 |
presumptive segmental plate | 4.77e-07 | 71 |
dermomyotome | 4.77e-07 | 71 |
trunk paraxial mesoderm | 4.77e-07 | 71 |
paraxial mesoderm | 8.33e-07 | 72 |
presumptive paraxial mesoderm | 8.33e-07 | 72 |