FFCP PHASE1:Hg19::chr17:58164388..58164403,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:58164388..58164403,+ | |||
|description=CAGE_peak_at_chr17:58164388..58164403,+ | |description=CAGE_peak_at_chr17:58164388..58164403,+ | ||
|id=chr17:58164388..58164403,+ | |id=chr17:58164388..58164403,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.02e-36!42;CL:0000860!9.56e-35!45;CL:0002194!7.83e-34!63;CL:0000576!7.83e-34!63;CL:0000040!7.83e-34!63;CL:0000559!7.83e-34!63;CL:0002009!2.65e-32!65;CL:0000839!7.13e-29!70;CL:0000766!2.07e-28!76;CL:0000557!3.02e-28!71;CL:0000763!3.60e-15!112;CL:0000049!3.60e-15!112;CL:0002087!3.99e-13!119;CL:0000738!4.15e-11!140;CL:0002031!4.28e-10!124;CL:0002393!7.96e-09!9;CL:0002397!7.96e-09!9 | |ontology_enrichment_celltype=CL:0002057!2.02e-36!42;CL:0000860!9.56e-35!45;CL:0002194!7.83e-34!63;CL:0000576!7.83e-34!63;CL:0000040!7.83e-34!63;CL:0000559!7.83e-34!63;CL:0002009!2.65e-32!65;CL:0000839!7.13e-29!70;CL:0000766!2.07e-28!76;CL:0000557!3.02e-28!71;CL:0000763!3.60e-15!112;CL:0000049!3.60e-15!112;CL:0002087!3.99e-13!119;CL:0000738!4.15e-11!140;CL:0002031!4.28e-10!124;CL:0002393!7.96e-09!9;CL:0002397!7.96e-09!9 | ||
|ontology_enrichment_celltype_v019=CL:0000473;7.76e-31;39!CL:0000234;7.76e-31;39!CL:0000860;9.71e-27;33!CL:0002057;9.71e-27;33!CL:0000576;3.01e-15;48!CL:0000235;3.89e-15;6!CL:0000766;7.77e-14;69!CL:0002561;6.33e-12;2!CL:0002623;1.83e-08;3!CL:0000875;5.24e-08;3!CL:0002396;5.24e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.50e-41,48;CL:0000234,3.50e-41,48;CL:0002194,1.61e-35,59;CL:0000576,1.61e-35,59;CL:0000040,1.61e-35,59;CL:0000559,1.61e-35,59;CL:0002009,3.17e-34,61;CL:0000839,2.51e-31,66;CL:0000557,8.48e-31,67;CL:0000860,8.67e-30,42;CL:0002057,8.67e-30,42;CL:0000766,2.26e-28,72;CL:0000763,1.75e-17,108;CL:0000049,1.75e-17,108;CL:0002087,3.76e-16,115;CL:0002031,2.70e-15,120;CL:0000235,5.03e-15,6;CL:0000738,5.59e-13,136;CL:0002561,6.17e-12,2;CL:0002032,2.78e-10,161;CL:0000837,2.78e-10,161;CL:0000988,4.98e-10,177;CL:0000037,1.13e-09,168;CL:0002623,1.76e-08,3;CL:0000875,3.80e-08,3;CL:0002396,3.80e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;8.49e-23;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.56e-29!102;UBERON:0003061!1.56e-29!102;UBERON:0002193!8.36e-29!112;UBERON:0002371!2.46e-23!80;UBERON:0001474!1.17e-20!86;UBERON:0004765!2.84e-20!101;UBERON:0001434!2.84e-20!101;UBERON:0002204!2.47e-19!167;UBERON:0002405!1.78e-17!115;UBERON:0003081!3.72e-16!216;UBERON:0000926!2.11e-13!448;UBERON:0004120!2.11e-13!448;UBERON:0006603!2.11e-13!448;UBERON:0000178!2.64e-07!15;UBERON:0000179!2.64e-07!15;UBERON:0000463!2.64e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!1.56e-29!102;UBERON:0003061!1.56e-29!102;UBERON:0002193!8.36e-29!112;UBERON:0002371!2.46e-23!80;UBERON:0001474!1.17e-20!86;UBERON:0004765!2.84e-20!101;UBERON:0001434!2.84e-20!101;UBERON:0002204!2.47e-19!167;UBERON:0002405!1.78e-17!115;UBERON:0003081!3.72e-16!216;UBERON:0000926!2.11e-13!448;UBERON:0004120!2.11e-13!448;UBERON:0006603!2.11e-13!448;UBERON:0000178!2.64e-07!15;UBERON:0000179!2.64e-07!15;UBERON:0000463!2.64e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0005933;6.33e-12;2!UBERON:0005942;6.33e-12;2!UBERON:0005932;6.33e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.47e-29,98;UBERON:0003061,3.47e-29,98;UBERON:0002371,1.17e-26,76;UBERON:0002193,5.13e-26,108;UBERON:0001474,2.13e-24,82;UBERON:0004765,7.54e-22,90;UBERON:0002405,5.26e-21,93;UBERON:0001434,3.13e-19,100;UBERON:0003081,5.48e-18,203;UBERON:0002204,1.72e-13,167;UBERON:0005933,6.17e-12,2;UBERON:0005942,6.17e-12,2;UBERON:0005932,6.17e-12,2;UBERON:0000926,2.10e-10,315;UBERON:0004120,2.10e-10,315;UBERON:0006603,2.10e-10,315 | |||
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| ||
|short_description=p@chr17:58164388..58164403,+ | |short_description=p@chr17:58164388..58164403,+ | ||
}} | }} |
Latest revision as of 19:31, 25 July 2015
Short description: | p@chr17:58164388..58164403, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:58164388..58164403, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.50e-41 | 48 |
phagocyte | 3.50e-41 | 48 |
monopoietic cell | 1.61e-35 | 59 |
monocyte | 1.61e-35 | 59 |
monoblast | 1.61e-35 | 59 |
promonocyte | 1.61e-35 | 59 |
macrophage dendritic cell progenitor | 3.17e-34 | 61 |
myeloid lineage restricted progenitor cell | 2.51e-31 | 66 |
granulocyte monocyte progenitor cell | 8.48e-31 | 67 |
classical monocyte | 8.67e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.67e-30 | 42 |
myeloid leukocyte | 2.26e-28 | 72 |
myeloid cell | 1.75e-17 | 108 |
common myeloid progenitor | 1.75e-17 | 108 |
nongranular leukocyte | 3.76e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 2.70e-15 | 120 |
macrophage | 5.03e-15 | 6 |
leukocyte | 5.59e-13 | 136 |
outer root sheath cell | 6.17e-12 | 2 |
hematopoietic oligopotent progenitor cell | 2.78e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.78e-10 | 161 |
hematopoietic cell | 4.98e-10 | 177 |
hematopoietic stem cell | 1.13e-09 | 168 |
acinar cell of salivary gland | 1.76e-08 | 3 |
non-classical monocyte | 3.80e-08 | 3 |
CD14-low, CD16-positive monocyte | 3.80e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.47e-29 | 98 |
blood island | 3.47e-29 | 98 |
bone marrow | 1.17e-26 | 76 |
hemolymphoid system | 5.13e-26 | 108 |
bone element | 2.13e-24 | 82 |
skeletal element | 7.54e-22 | 90 |
immune system | 5.26e-21 | 93 |
skeletal system | 3.13e-19 | 100 |
lateral plate mesoderm | 5.48e-18 | 203 |
musculoskeletal system | 1.72e-13 | 167 |
hair root sheath | 6.17e-12 | 2 |
hair outer root sheath | 6.17e-12 | 2 |
bulb of hair follicle | 6.17e-12 | 2 |
mesoderm | 2.10e-10 | 315 |
mesoderm-derived structure | 2.10e-10 | 315 |
presumptive mesoderm | 2.10e-10 | 315 |