FFCP PHASE1:Hg19::chr2:114300263..114300269,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_ENST00000416758_5end | |association_with_transcript=-14bp_to_ENST00000416758_5end | ||
|cluster_id=chr2:114300263..114300269,- | |||
|description=CAGE_peak_1_at_ENST00000416758_5end | |description=CAGE_peak_1_at_ENST00000416758_5end | ||
|id=chr2:114300263..114300269,- | |id=chr2:114300263..114300269,- | ||
|ontology_enrichment_celltype=CL:0002622!5.30e-10!3;CL:0002504!5.79e-10!3;CL:1000279!5.79e-10!3;CL:1000280!5.79e-10!3;CL:0002586!1.16e-09!3;CL:0000149!2.52e-07!4;CL:1000487!5.11e-07!2 | |ontology_enrichment_celltype=CL:0002622!5.30e-10!3;CL:0002504!5.79e-10!3;CL:1000279!5.79e-10!3;CL:1000280!5.79e-10!3;CL:0002586!1.16e-09!3;CL:0000149!2.52e-07!4;CL:1000487!5.11e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002504;5.35e-40;3!CL:1000279;5.35e-40;3!CL:1000280;5.35e-40;3!CL:0002622;6.34e-19;3!CL:0002586;1.55e-18;3!CL:0002574;2.11e-14;1!CL:0000149;3.73e-14;4!CL:1000487;4.09e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,8.55e-40,3;CL:1000279,8.55e-40,3;CL:1000280,8.55e-40,3;CL:0002622,6.63e-19,3;CL:0002586,1.36e-18,3;CL:0002574,3.15e-14,1;CL:0000149,3.37e-14,4;CL:1000487,4.09e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;3.56e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,3.56e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001046!2.12e-13!19;UBERON:0007023!4.50e-13!115;UBERON:0002367!1.48e-12!11;UBERON:0010147!1.48e-12!11;UBERON:0009846!1.48e-12!11;UBERON:0003353!1.48e-12!11;UBERON:0004902!1.48e-12!11;UBERON:0003820!1.48e-12!11;UBERON:0009847!1.48e-12!11;UBERON:0000162!3.68e-12!14;UBERON:0001353!3.68e-12!14;UBERON:0000163!3.68e-12!14;UBERON:0006866!3.68e-12!14;UBERON:0000164!3.68e-12!14;UBERON:0000931!3.68e-12!14;UBERON:0003296!5.53e-12!4;UBERON:0010133!5.53e-12!4;UBERON:0003937!2.08e-11!12;UBERON:0005399!2.08e-11!12;UBERON:0004122!3.01e-11!15;UBERON:0001781!1.16e-09!3;UBERON:0001782!1.16e-09!3;UBERON:0005424!1.16e-09!3;UBERON:0000966!1.23e-09!5;UBERON:0005388!1.23e-09!5;UBERON:0001802!1.23e-09!5;UBERON:0003101!2.35e-07!22;UBERON:0000079!2.35e-07!22;UBERON:0001905!4.55e-07!2;UBERON:0002757!4.55e-07!2;UBERON:0010134!4.55e-07!2;UBERON:0002784!4.55e-07!2;UBERON:0005408!4.55e-07!2;UBERON:0001899!4.55e-07!2;UBERON:0001894!8.01e-07!7;UBERON:0006222!8.01e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;1.55e-18;3!UBERON:0001782;1.55e-18;3!UBERON:0001155;8.21e-14;9!UBERON:0000160;5.51e-12;17!UBERON:0002367;1.16e-11;11!UBERON:0010147;1.16e-11;11!UBERON:0000966;1.62e-11;5!UBERON:0005388;1.62e-11;5!UBERON:0001802;1.62e-11;5!UBERON:0000059;2.07e-11;11!UBERON:0003937;9.77e-11;12!UBERON:0005399;9.77e-11;12!UBERON:0005409;1.96e-09;22!UBERON:0001135;1.62e-08;15!UBERON:0000077;3.35e-08;27!UBERON:0001905;7.52e-08;2!UBERON:0002757;7.52e-08;2!UBERON:0010134;7.52e-08;2!UBERON:0005408;7.52e-08;2!UBERON:0001899;7.52e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.36e-18,3;UBERON:0005424,1.36e-18,3;UBERON:0001781,3.37e-14,4;UBERON:0001155,9.57e-14,9;UBERON:0005409,1.30e-12,25;UBERON:0000160,6.10e-12,17;UBERON:0002367,1.18e-11,11;UBERON:0010147,1.18e-11,11;UBERON:0009846,1.18e-11,11;UBERON:0003353,1.18e-11,11;UBERON:0004902,1.18e-11,11;UBERON:0003820,1.18e-11,11;UBERON:0009847,1.18e-11,11;UBERON:0000059,2.34e-11,11;UBERON:0003937,9.93e-11,12;UBERON:0005399,9.93e-11,12;UBERON:0000966,8.86e-10,6;UBERON:0005388,8.86e-10,6;UBERON:0001802,8.86e-10,6;UBERON:0000162,2.83e-09,14;UBERON:0001353,2.83e-09,14;UBERON:0000163,2.83e-09,14;UBERON:0006866,2.83e-09,14;UBERON:0000164,2.83e-09,14;UBERON:0000931,2.83e-09,14;UBERON:0004122,1.08e-08,15;UBERON:0001135,1.78e-08,15;UBERON:0001905,6.58e-08,2;UBERON:0002757,6.58e-08,2;UBERON:0010134,6.58e-08,2;UBERON:0005408,6.58e-08,2;UBERON:0001899,6.58e-08,2;UBERON:0000077,1.14e-07,29;UBERON:0001046,5.75e-07,19 | |||
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| ||
|short_description=p1@ENST00000416758 | |short_description=p1@ENST00000416758 | ||
}} | }} |
Latest revision as of 23:39, 28 July 2015
Short description: | p1@ENST00000416758 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000416758_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_ENST00000416758_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 8.55e-40 | 3 |
smooth muscle cell of large intestine | 8.55e-40 | 3 |
smooth muscle cell of colon | 8.55e-40 | 3 |
prostate stromal cell | 6.63e-19 | 3 |
retinal pigment epithelial cell | 1.36e-18 | 3 |
stromal cell of pancreas | 3.15e-14 | 1 |
visual pigment cell | 3.37e-14 | 4 |
smooth muscle cell of prostate | 4.09e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
teratoma | 3.56e-08 | 2 |