FFCP PHASE1:Hg19::chr17:72439704..72439736,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55890 | |EntrezGene=55890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13309 | |HGNC=13309 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=480bp_to_ENST00000482723_5end | |association_with_transcript=480bp_to_ENST00000482723_5end | ||
|cluster_id=chr17:72439704..72439736,+ | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_8_at_GPRC5C_5end | |description=CAGE_peak_8_at_GPRC5C_5end | ||
|id=chr17:72439704..72439736,+ | |id=chr17:72439704..72439736,+ | ||
|ontology_enrichment_celltype=CL:0002393!3.22e-17!9;CL:0002397!3.22e-17!9;CL:0002194!1.64e-15!63;CL:0000576!1.64e-15!63;CL:0000040!1.64e-15!63;CL:0000559!1.64e-15!63;CL:0002009!6.42e-15!65;CL:0002057!1.67e-14!42;CL:0000875!4.81e-14!3;CL:0002396!4.81e-14!3;CL:0002619!6.50e-14!3;CL:0000839!1.39e-13!70;CL:0000860!2.43e-13!45;CL:0000557!2.45e-13!71;CL:0000766!3.27e-12!76;CL:0000763!4.27e-08!112;CL:0000049!4.27e-08!112 | |ontology_enrichment_celltype=CL:0002393!3.22e-17!9;CL:0002397!3.22e-17!9;CL:0002194!1.64e-15!63;CL:0000576!1.64e-15!63;CL:0000040!1.64e-15!63;CL:0000559!1.64e-15!63;CL:0002009!6.42e-15!65;CL:0002057!1.67e-14!42;CL:0000875!4.81e-14!3;CL:0002396!4.81e-14!3;CL:0002619!6.50e-14!3;CL:0000839!1.39e-13!70;CL:0000860!2.43e-13!45;CL:0000557!2.45e-13!71;CL:0000766!3.27e-12!76;CL:0000763!4.27e-08!112;CL:0000049!4.27e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000875;1.09e-30;3!CL:0002396;1.09e-30;3!CL:0000576;7.86e-16;48!CL:0002393;9.04e-16;6!CL:0002397;9.04e-16;6!CL:0000766;3.41e-09;69!CL:0002619;1.12e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,8.96e-40,9;CL:0002397,8.96e-40,9;CL:0000875,1.09e-30,3;CL:0002396,1.09e-30,3;CL:0000860,6.21e-19,42;CL:0002057,6.21e-19,42;CL:0002194,6.56e-18,59;CL:0000576,6.56e-18,59;CL:0000040,6.56e-18,59;CL:0000559,6.56e-18,59;CL:0002009,2.49e-17,61;CL:0000473,1.41e-16,48;CL:0000234,1.41e-16,48;CL:0000839,4.93e-16,66;CL:0000557,8.50e-16,67;CL:0000766,1.04e-14,72;CL:0000763,8.31e-10,108;CL:0000049,8.31e-10,108;CL:0002087,3.34e-09,115;CL:0002031,8.17e-09,120;CL:0002619,1.12e-08,3;CL:0000738,9.30e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002057;3.72e-12;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.75e-15!115;UBERON:0007023!8.18e-13!115;UBERON:0002390!7.46e-12!102;UBERON:0003061!7.46e-12!102;UBERON:0002193!1.36e-11!112;UBERON:0002371!2.06e-11!80;UBERON:0001474!2.36e-10!86;UBERON:0004765!2.88e-08!101;UBERON:0001434!2.88e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.10e-14,76;UBERON:0001474,6.32e-13,82;UBERON:0004765,8.87e-12,90;UBERON:0002405,2.13e-11,93;UBERON:0002390,8.16e-11,98;UBERON:0003061,8.16e-11,98;UBERON:0001434,1.35e-10,100;UBERON:0002193,8.31e-10,108 | |||
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| ||
|short_description=p8@GPRC5C | |short_description=p8@GPRC5C | ||
}} | }} |
Latest revision as of 07:33, 17 September 2015
Short description: | p8@GPRC5C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GPRC5C_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | 480bp_to_ENST00000482723_5end |
EntrezGene: | GPRC5C |
HGNC: | 13309 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 8.96e-40 | 9 |
CD14-positive, CD16-positive monocyte | 8.96e-40 | 9 |
non-classical monocyte | 1.09e-30 | 3 |
CD14-low, CD16-positive monocyte | 1.09e-30 | 3 |
classical monocyte | 6.21e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.21e-19 | 42 |
monopoietic cell | 6.56e-18 | 59 |
monocyte | 6.56e-18 | 59 |
monoblast | 6.56e-18 | 59 |
promonocyte | 6.56e-18 | 59 |
macrophage dendritic cell progenitor | 2.49e-17 | 61 |
defensive cell | 1.41e-16 | 48 |
phagocyte | 1.41e-16 | 48 |
myeloid lineage restricted progenitor cell | 4.93e-16 | 66 |
granulocyte monocyte progenitor cell | 8.50e-16 | 67 |
myeloid leukocyte | 1.04e-14 | 72 |
myeloid cell | 8.31e-10 | 108 |
common myeloid progenitor | 8.31e-10 | 108 |
nongranular leukocyte | 3.34e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.17e-09 | 120 |
adult endothelial progenitor cell | 1.12e-08 | 3 |
leukocyte | 9.30e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.10e-14 | 76 |
bone element | 6.32e-13 | 82 |
skeletal element | 8.87e-12 | 90 |
immune system | 2.13e-11 | 93 |
hematopoietic system | 8.16e-11 | 98 |
blood island | 8.16e-11 | 98 |
skeletal system | 1.35e-10 | 100 |
hemolymphoid system | 8.31e-10 | 108 |