FFCP PHASE1:Hg19::chr17:73780879..73780963,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85451 | |EntrezGene=85451 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29369 | |HGNC=29369 | ||
|TSSclassifier=strong | |||
|UniProt=Q9C0B0 | |UniProt=Q9C0B0 | ||
|association_with_transcript=0bp_to_NM_001080419,NR_038131_5end | |association_with_transcript=0bp_to_NM_001080419,NR_038131_5end | ||
|cluster_id=chr17:73780879..73780963,+ | |||
|description=CAGE_peak_1_at_UNK_5end | |description=CAGE_peak_1_at_UNK_5end | ||
|id=chr17:73780879..73780963,+ | |id=chr17:73780879..73780963,+ | ||
|ontology_enrichment_celltype=CL:0000542!9.29e-10!53;CL:0000051!9.29e-10!53;CL:0000838!1.41e-09!52;CL:0000945!2.22e-07!24;CL:0000826!2.22e-07!24 | |ontology_enrichment_celltype=CL:0000542!9.29e-10!53;CL:0000051!9.29e-10!53;CL:0000838!1.41e-09!52;CL:0000945!2.22e-07!24;CL:0000826!2.22e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.82e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,9.29e-10,53;CL:0000051,9.29e-10,53;CL:0000838,1.41e-09,52;CL:0000945,2.22e-07,24;CL:0000826,2.22e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.35e-08!235;DOID:14566!1.31e-07!239;DOID:0050687!3.98e-07!143 | |ontology_enrichment_disease=DOID:162!1.35e-08!235;DOID:14566!1.31e-07!239;DOID:0050687!3.98e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.35e-08,235;DOID:14566,1.31e-07,239;DOID:0050687,3.98e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.05e-13!94;UBERON:0001016!3.05e-13!94;UBERON:0001017!1.63e-11!82;UBERON:0005743!2.31e-11!86;UBERON:0007023!7.06e-11!115;UBERON:0001049!8.73e-11!57;UBERON:0005068!8.73e-11!57;UBERON:0006241!8.73e-11!57;UBERON:0007135!8.73e-11!57;UBERON:0002346!1.24e-09!90;UBERON:0000955!3.50e-09!69;UBERON:0006238!3.50e-09!69;UBERON:0003080!2.49e-08!42;UBERON:0003075!2.95e-08!86;UBERON:0007284!2.95e-08!86;UBERON:0002616!3.06e-08!59;UBERON:0002780!5.13e-08!41;UBERON:0001890!5.13e-08!41;UBERON:0006240!5.13e-08!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;3.48e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.30e-13,89;UBERON:0001017,3.29e-11,81;UBERON:0007023,1.01e-10,114;UBERON:0001049,1.83e-10,56;UBERON:0005068,1.83e-10,56;UBERON:0006241,1.83e-10,56;UBERON:0007135,1.83e-10,56;UBERON:0002346,4.41e-10,86;UBERON:0000073,4.75e-10,53;UBERON:0002616,4.75e-10,53;UBERON:0000955,6.83e-09,68;UBERON:0006238,6.83e-09,68;UBERON:0003075,1.17e-08,82;UBERON:0007284,1.17e-08,82;UBERON:0002780,5.13e-08,41;UBERON:0001890,5.13e-08,41;UBERON:0003080,5.13e-08,41;UBERON:0006240,5.13e-08,41;UBERON:0011216,1.58e-07,223 | |||
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| ||
|short_description=p1@UNK | |short_description=p1@UNK | ||
}} | }} |
Latest revision as of 12:26, 17 September 2015
Short description: | p1@UNK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UNK_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001080419, NR_038131_5end |
EntrezGene: | UNK |
HGNC: | 29369 |
UniProt: | Q9C0B0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 9.29e-10 | 53 |
common lymphoid progenitor | 9.29e-10 | 53 |
lymphoid lineage restricted progenitor cell | 1.41e-09 | 52 |
lymphocyte of B lineage | 2.22e-07 | 24 |
pro-B cell | 2.22e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
nervous system | 4.30e-13 | 89 |
central nervous system | 3.29e-11 | 81 |
adult organism | 1.01e-10 | 114 |
neural tube | 1.83e-10 | 56 |
neural rod | 1.83e-10 | 56 |
future spinal cord | 1.83e-10 | 56 |
neural keel | 1.83e-10 | 56 |
neurectoderm | 4.41e-10 | 86 |
regional part of nervous system | 4.75e-10 | 53 |
regional part of brain | 4.75e-10 | 53 |
brain | 6.83e-09 | 68 |
future brain | 6.83e-09 | 68 |
neural plate | 1.17e-08 | 82 |
presumptive neural plate | 1.17e-08 | 82 |
regional part of forebrain | 5.13e-08 | 41 |
forebrain | 5.13e-08 | 41 |
anterior neural tube | 5.13e-08 | 41 |
future forebrain | 5.13e-08 | 41 |
organ system subdivision | 1.58e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.35e-08 | 235 |
disease of cellular proliferation | 1.31e-07 | 239 |
cell type cancer | 3.98e-07 | 143 |