FFCP PHASE1:Hg19::chr2:178129680..178129691,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4780 | |EntrezGene=4780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7782 | |HGNC=7782 | ||
|TSSclassifier=strong | |||
|UniProt=C9J3K4 | |UniProt=C9J3K4 | ||
|association_with_transcript=-129bp_to_ENST00000430047_5end | |association_with_transcript=-129bp_to_ENST00000430047_5end | ||
|cluster_id=chr2:178129680..178129691,- | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_35_at_NFE2L2_5end | |description=CAGE_peak_35_at_NFE2L2_5end | ||
|id=chr2:178129680..178129691,- | |id=chr2:178129680..178129691,- | ||
|ontology_enrichment_celltype=CL:0002178!1.76e-09!3;CL:0000223!7.10e-08!59;CL:0002251!1.63e-07!21 | |ontology_enrichment_celltype=CL:0002178!1.76e-09!3;CL:0000223!7.10e-08!59;CL:0002251!1.63e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.09e-38;12!CL:0000764;2.74e-15;2!CL:0000558;2.74e-15;2!CL:0000746;1.04e-10;3!CL:0000737;2.35e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.50e-38,12;CL:0000764,2.74e-15,2;CL:0000765,2.74e-15,2;CL:0000050,2.74e-15,2;CL:0000038,2.74e-15,2;CL:0000558,2.74e-15,2;CL:0000547,2.74e-15,2;CL:0000549,2.74e-15,2;CL:0000550,2.74e-15,2;CL:0000552,2.74e-15,2;CL:0000746,1.09e-10,3;CL:0000513,1.09e-10,3;CL:0000737,2.43e-08,4;CL:0000223,2.57e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.88e-24;11!UBERON:0009497;2.09e-20;13!CL:0000513;1.04e-10;3!UBERON:0001041;2.88e-09;30!UBERON:0003104;8.21e-09;31 | |||
|ontology_enrichment_disease=DOID:305!1.60e-08!106;DOID:3493!4.65e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:7;1.25e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.91e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0000945!6.58e-13!8;UBERON:0010039!6.58e-13!8;UBERON:0005409!2.28e-11!35;UBERON:0004921!6.17e-08!129;UBERON:0004185!6.17e-08!129;UBERON:0001007!6.05e-07!155;UBERON:0001555!6.05e-07!155;UBERON:0007026!6.05e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.45e-24;19!UBERON:0006925;2.45e-24;19!UBERON:0002423;1.19e-18;25!UBERON:0002365;2.34e-14;31!UBERON:0002330;2.34e-14;31!UBERON:0002368;1.02e-13;33!UBERON:0000949;1.28e-10;43!UBERON:0002530;2.03e-07;57!UBERON:0000945;5.23e-07;5!UBERON:0010039;5.23e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.60e-24,19;UBERON:0006925,2.60e-24,19;UBERON:0008836,2.60e-24,19;UBERON:0008835,4.38e-21,22;UBERON:0003894,4.38e-21,22;UBERON:0009854,3.39e-20,23;UBERON:0007499,1.25e-18,25;UBERON:0009497,1.25e-18,25;UBERON:0000015,1.25e-18,25;UBERON:0002423,1.25e-18,25;UBERON:0006235,1.25e-18,25;UBERON:0004161,1.25e-18,25;UBERON:0009856,6.16e-18,26;UBERON:0002365,3.88e-15,31;UBERON:0002330,3.88e-15,31;UBERON:0002368,1.80e-13,35;UBERON:0000949,1.37e-10,45;UBERON:0003929,6.69e-09,54;UBERON:0005172,6.69e-09,54;UBERON:0005173,6.69e-09,54;UBERON:0001041,1.69e-08,87;UBERON:0002530,3.49e-08,59;UBERON:0002417,4.71e-08,60;UBERON:0000916,4.71e-08,60 | |||
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| ||
|short_description=p35@NFE2L2 | |short_description=p35@NFE2L2 | ||
}} | }} |
Latest revision as of 10:29, 18 September 2015
Short description: | p35@NFE2L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_NFE2L2_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | -129bp_to_ENST00000430047_5end |
EntrezGene: | NFE2L2 |
HGNC: | 7782 |
UniProt: | C9J3K4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.50e-38 | 12 |
erythroid lineage cell | 2.74e-15 | 2 |
erythroblast | 2.74e-15 | 2 |
megakaryocyte-erythroid progenitor cell | 2.74e-15 | 2 |
erythroid progenitor cell | 2.74e-15 | 2 |
reticulocyte | 2.74e-15 | 2 |
proerythroblast | 2.74e-15 | 2 |
basophilic erythroblast | 2.74e-15 | 2 |
polychromatophilic erythroblast | 2.74e-15 | 2 |
orthochromatic erythroblast | 2.74e-15 | 2 |
cardiac muscle cell | 1.09e-10 | 3 |
cardiac muscle myoblast | 1.09e-10 | 3 |
striated muscle cell | 2.43e-08 | 4 |
endodermal cell | 2.57e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.60e-24 | 19 |
digestive gland | 2.60e-24 | 19 |
liver bud | 2.60e-24 | 19 |
hepatic diverticulum | 4.38e-21 | 22 |
liver primordium | 4.38e-21 | 22 |
digestive tract diverticulum | 3.39e-20 | 23 |
epithelial sac | 1.25e-18 | 25 |
epithelium of foregut-midgut junction | 1.25e-18 | 25 |
anatomical boundary | 1.25e-18 | 25 |
hepatobiliary system | 1.25e-18 | 25 |
foregut-midgut junction | 1.25e-18 | 25 |
septum transversum | 1.25e-18 | 25 |
sac | 6.16e-18 | 26 |
exocrine gland | 3.88e-15 | 31 |
exocrine system | 3.88e-15 | 31 |
endocrine gland | 1.80e-13 | 35 |
endocrine system | 1.37e-10 | 45 |
gut epithelium | 6.69e-09 | 54 |
abdomen element | 6.69e-09 | 54 |
abdominal segment element | 6.69e-09 | 54 |
foregut | 1.69e-08 | 87 |
gland | 3.49e-08 | 59 |
abdominal segment of trunk | 4.71e-08 | 60 |
abdomen | 4.71e-08 | 60 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.91e-07 | 39 |