FFCP PHASE1:Hg19::chr18:12977031..12977043,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:12977031..12977043,+ | |||
|description=CAGE_peak_at_chr18:12977031..12977043,+ | |description=CAGE_peak_at_chr18:12977031..12977043,+ | ||
|id=chr18:12977031..12977043,+ | |id=chr18:12977031..12977043,+ | ||
|ontology_enrichment_celltype=CL:0000239!1.00e-09!3;CL:1000615!1.00e-09!3;CL:0002306!1.00e-09!3;CL:1000507!3.46e-08!12;CL:1000494!3.46e-08!12;CL:0002536!2.03e-07!2;CL:0002195!9.00e-07!2;CL:0002571!9.00e-07!2 | |ontology_enrichment_celltype=CL:0000239!1.00e-09!3;CL:1000615!1.00e-09!3;CL:0002306!1.00e-09!3;CL:1000507!3.46e-08!12;CL:1000494!3.46e-08!12;CL:0002536!2.03e-07!2;CL:0002195!9.00e-07!2;CL:0002571!9.00e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002600;7.14e-26;2!CL:0000306;1.13e-13;4!CL:0002222;1.13e-13;4!CL:0002224;1.13e-13;4!CL:0000039;1.89e-08;7!CL:0000586;1.89e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002600,7.14e-26,2;CL:0000306,1.29e-13,4;CL:0002222,1.29e-13,4;CL:0002224,1.29e-13,4;CL:0000039,1.89e-08,7;CL:0000586,1.89e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006853!1.00e-09!3;UBERON:0007685!1.00e-09!3;UBERON:0004134!1.00e-09!3;UBERON:0001828!2.51e-09!8;UBERON:0009773!3.46e-08!12;UBERON:0001231!3.46e-08!12;UBERON:0004810!3.46e-08!12;UBERON:0001737!5.97e-08!9;UBERON:0000075!6.40e-08!13;UBERON:0005944!6.40e-08!13;UBERON:0004288!6.40e-08!13;UBERON:0003089!6.40e-08!13;UBERON:0001004!1.09e-07!72;UBERON:0003104!4.67e-07!238;UBERON:0009142!4.67e-07!238;UBERON:0003129!7.86e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;1.13e-13;4!UBERON:0005389;1.13e-13;4!UBERON:0000484;1.13e-13;4!UBERON:0000965;1.13e-13;4!UBERON:0001803;1.13e-13;4!UBERON:0003126;2.18e-08;7!UBERON:0001005;2.18e-08;7!UBERON:0000473;1.49e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,1.29e-13,4;UBERON:0005389,1.29e-13,4;UBERON:0000484,1.29e-13,4;UBERON:0002546,1.29e-13,4;UBERON:0000965,1.29e-13,4;UBERON:0001803,1.29e-13,4;UBERON:0003073,1.29e-13,4;UBERON:0005426,1.29e-13,4;UBERON:0003126,2.18e-08,7;UBERON:0001005,2.18e-08,7;UBERON:0000473,1.49e-07,8;UBERON:0000076,1.80e-07,8 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0.527533956456907,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0.280901613404497,0.816616685019573,0.491337269247072,0.103325781175765,0,0,0,0.718618141816238,0.505008341862199,0.125118519871964,0.831192346452549,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0.110293972732394,0,0,0,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.402115889646523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0.845302752556,0,0,0.514414748524284,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0.860468113224309,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400794101257669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0.105600336519406,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72715170865599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546327859818478,0,2.34574308406558,0,0.643264296743914,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:12977031..12977043,+ | |short_description=p@chr18:12977031..12977043,+ | ||
}} | }} |
Latest revision as of 23:43, 25 July 2015
Short description: | p@chr18:12977031..12977043, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:12977031..12977043, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of trachea | 7.14e-26 | 2 |
crystallin accumulating cell | 1.29e-13 | 4 |
vertebrate lens cell | 1.29e-13 | 4 |
lens epithelial cell | 1.29e-13 | 4 |
germ line cell | 1.89e-08 | 7 |
germ cell | 1.89e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 1.29e-13 | 4 |
transparent eye structure | 1.29e-13 | 4 |
simple cuboidal epithelium | 1.29e-13 | 4 |
cranial placode | 1.29e-13 | 4 |
lens of camera-type eye | 1.29e-13 | 4 |
epithelium of lens | 1.29e-13 | 4 |
lens placode | 1.29e-13 | 4 |
lens vesicle | 1.29e-13 | 4 |
trachea | 2.18e-08 | 7 |
respiratory airway | 2.18e-08 | 7 |
testis | 1.49e-07 | 8 |
external ectoderm | 1.80e-07 | 8 |