FFCP PHASE1:Hg19::chr18:24521807..24521809,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:24521807..24521809,+ | |||
|coexpression_cluster_id=C648 | |||
|description=CAGE_peak_at_chr18:24521807..24521809,+ | |description=CAGE_peak_at_chr18:24521807..24521809,+ | ||
|id=chr18:24521807..24521809,+ | |id=chr18:24521807..24521809,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.55e-98;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!2.66e-49!34;UBERON:0002780!4.63e-48!41;UBERON:0001890!4.63e-48!41;UBERON:0006240!4.63e-48!41;UBERON:0003080!6.52e-47!42;UBERON:0001049!2.79e-46!57;UBERON:0005068!2.79e-46!57;UBERON:0006241!2.79e-46!57;UBERON:0007135!2.79e-46!57;UBERON:0001869!8.46e-44!32;UBERON:0002791!1.14e-42!33;UBERON:0002020!4.44e-34!34;UBERON:0003528!4.44e-34!34;UBERON:0002619!1.78e-33!22;UBERON:0002616!3.15e-33!59;UBERON:0003056!4.13e-32!61;UBERON:0001017!1.74e-31!82;UBERON:0003075!2.40e-30!86;UBERON:0007284!2.40e-30!86;UBERON:0005743!5.53e-30!86;UBERON:0000956!1.54e-29!25;UBERON:0000203!1.54e-29!25;UBERON:0002346!6.08e-29!90;UBERON:0001950!3.51e-28!20;UBERON:0000955!7.40e-28!69;UBERON:0006238!7.40e-28!69;UBERON:0000073!4.70e-27!94;UBERON:0001016!4.70e-27!94;UBERON:0007023!6.28e-26!115;UBERON:0000200!2.83e-19!6;UBERON:0002240!8.40e-18!3;UBERON:0000033!8.56e-18!123;UBERON:0002771!9.94e-18!3;UBERON:0000153!6.66e-17!129;UBERON:0007811!6.66e-17!129;UBERON:0004121!1.61e-14!169;UBERON:0002336!3.50e-14!1;UBERON:0001018!3.50e-14!1;UBERON:0002473!3.50e-14!1;UBERON:0005340!3.50e-14!1;UBERON:0002316!3.50e-14!1;UBERON:0003544!3.50e-14!1;UBERON:0001020!3.50e-14!1;UBERON:0005970!3.50e-14!1;UBERON:0002437!3.50e-14!1;UBERON:0000924!3.77e-14!173;UBERON:0006601!3.77e-14!173;UBERON:0003112!3.98e-14!1;UBERON:0000032!3.98e-14!1;UBERON:0005253!3.98e-14!1;UBERON:0003128!3.98e-14!1;UBERON:0002241!3.98e-14!1;UBERON:0001703!3.98e-14!1;UBERON:0004761!3.98e-14!1;UBERON:0009617!3.98e-14!1;UBERON:0002022!9.73e-14!1;UBERON:0002902!1.25e-13!1;UBERON:0009899!1.25e-13!1;UBERON:0007190!1.42e-13!1;UBERON:0001882!1.61e-13!1;UBERON:0005403!1.61e-13!1;UBERON:0000369!1.72e-13!4;UBERON:0002435!1.72e-13!4;UBERON:0000204!1.72e-13!4;UBERON:0010082!1.72e-13!4;UBERON:0000025!1.35e-12!194;UBERON:0005174!4.55e-11!5;UBERON:0001137!4.55e-11!5;UBERON:0002021!6.47e-11!5;UBERON:0000349!8.29e-11!5;UBERON:0004111!8.62e-10!241;UBERON:0000477!2.58e-09!286;UBERON:0009663!4.27e-08!7;UBERON:0001873!9.25e-08!2;UBERON:0010122!9.25e-08!2;UBERON:0005162!9.87e-08!2;UBERON:0000122!9.87e-08!2;UBERON:0001954!1.54e-07!2;UBERON:0003022!1.54e-07!2;UBERON:0002421!1.54e-07!2;UBERON:0002600!1.54e-07!2;UBERON:0001897!1.75e-07!2;UBERON:0001870!2.40e-07!2;UBERON:0000483!3.23e-07!309;UBERON:0001871!3.24e-07!7;UBERON:0000119!3.96e-07!312;UBERON:0000475!7.53e-07!365 | |ontology_enrichment_uberon=UBERON:0001893!2.66e-49!34;UBERON:0002780!4.63e-48!41;UBERON:0001890!4.63e-48!41;UBERON:0006240!4.63e-48!41;UBERON:0003080!6.52e-47!42;UBERON:0001049!2.79e-46!57;UBERON:0005068!2.79e-46!57;UBERON:0006241!2.79e-46!57;UBERON:0007135!2.79e-46!57;UBERON:0001869!8.46e-44!32;UBERON:0002791!1.14e-42!33;UBERON:0002020!4.44e-34!34;UBERON:0003528!4.44e-34!34;UBERON:0002619!1.78e-33!22;UBERON:0002616!3.15e-33!59;UBERON:0003056!4.13e-32!61;UBERON:0001017!1.74e-31!82;UBERON:0003075!2.40e-30!86;UBERON:0007284!2.40e-30!86;UBERON:0005743!5.53e-30!86;UBERON:0000956!1.54e-29!25;UBERON:0000203!1.54e-29!25;UBERON:0002346!6.08e-29!90;UBERON:0001950!3.51e-28!20;UBERON:0000955!7.40e-28!69;UBERON:0006238!7.40e-28!69;UBERON:0000073!4.70e-27!94;UBERON:0001016!4.70e-27!94;UBERON:0007023!6.28e-26!115;UBERON:0000200!2.83e-19!6;UBERON:0002240!8.40e-18!3;UBERON:0000033!8.56e-18!123;UBERON:0002771!9.94e-18!3;UBERON:0000153!6.66e-17!129;UBERON:0007811!6.66e-17!129;UBERON:0004121!1.61e-14!169;UBERON:0002336!3.50e-14!1;UBERON:0001018!3.50e-14!1;UBERON:0002473!3.50e-14!1;UBERON:0005340!3.50e-14!1;UBERON:0002316!3.50e-14!1;UBERON:0003544!3.50e-14!1;UBERON:0001020!3.50e-14!1;UBERON:0005970!3.50e-14!1;UBERON:0002437!3.50e-14!1;UBERON:0000924!3.77e-14!173;UBERON:0006601!3.77e-14!173;UBERON:0003112!3.98e-14!1;UBERON:0000032!3.98e-14!1;UBERON:0005253!3.98e-14!1;UBERON:0003128!3.98e-14!1;UBERON:0002241!3.98e-14!1;UBERON:0001703!3.98e-14!1;UBERON:0004761!3.98e-14!1;UBERON:0009617!3.98e-14!1;UBERON:0002022!9.73e-14!1;UBERON:0002902!1.25e-13!1;UBERON:0009899!1.25e-13!1;UBERON:0007190!1.42e-13!1;UBERON:0001882!1.61e-13!1;UBERON:0005403!1.61e-13!1;UBERON:0000369!1.72e-13!4;UBERON:0002435!1.72e-13!4;UBERON:0000204!1.72e-13!4;UBERON:0010082!1.72e-13!4;UBERON:0000025!1.35e-12!194;UBERON:0005174!4.55e-11!5;UBERON:0001137!4.55e-11!5;UBERON:0002021!6.47e-11!5;UBERON:0000349!8.29e-11!5;UBERON:0004111!8.62e-10!241;UBERON:0000477!2.58e-09!286;UBERON:0009663!4.27e-08!7;UBERON:0001873!9.25e-08!2;UBERON:0010122!9.25e-08!2;UBERON:0005162!9.87e-08!2;UBERON:0000122!9.87e-08!2;UBERON:0001954!1.54e-07!2;UBERON:0003022!1.54e-07!2;UBERON:0002421!1.54e-07!2;UBERON:0002600!1.54e-07!2;UBERON:0001897!1.75e-07!2;UBERON:0001870!2.40e-07!2;UBERON:0000483!3.23e-07!309;UBERON:0001871!3.24e-07!7;UBERON:0000119!3.96e-07!312;UBERON:0000475!7.53e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0001873;1.55e-98;2!UBERON:0005383;2.39e-66;3!UBERON:0005382;2.39e-66;3!UBERON:0000369;3.10e-50;4!UBERON:0002435;3.10e-50;4!UBERON:0000204;3.10e-50;4!UBERON:0009663;1.78e-29;7!UBERON:0002420;2.62e-23;9!UBERON:0000125;2.62e-23;9!UBERON:0007245;2.62e-23;9!UBERON:0002308;2.62e-23;9!UBERON:0010009;2.62e-23;9!UBERON:0010011;2.62e-23;9!UBERON:0000454;2.62e-23;9!UBERON:0003528;4.53e-08;34!UBERON:0002791;4.53e-08;32!UBERON:0002020;4.53e-08;34!UBERON:0001869;4.53e-08;32!UBERON:0001893;4.53e-08;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,1.55e-98,2;UBERON:0010122,1.55e-98,2;UBERON:0005383,2.39e-66,3;UBERON:0005382,2.39e-66,3;UBERON:0000369,3.10e-50,4;UBERON:0002435,3.10e-50,4;UBERON:0000204,3.10e-50,4;UBERON:0010082,3.10e-50,4;UBERON:0009663,1.78e-29,7;UBERON:0002420,2.62e-23,9;UBERON:0000125,2.62e-23,9;UBERON:0007245,2.62e-23,9;UBERON:0002308,2.62e-23,9;UBERON:0010009,2.62e-23,9;UBERON:0010011,2.62e-23,9;UBERON:0000454,2.62e-23,9;UBERON:0002791,1.82e-07,32;UBERON:0001869,1.82e-07,32;UBERON:0003528,4.03e-07,34;UBERON:0002020,4.03e-07,34;UBERON:0001893,4.03e-07,34 | |||
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|short_description=p@chr18:24521807..24521809,+ | |short_description=p@chr18:24521807..24521809,+ | ||
}} | }} |
Latest revision as of 00:11, 26 July 2015
Short description: | p@chr18:24521807..24521809, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:24521807..24521809, + |
Coexpression cluster: | C648_caudate_corpus_diencephalon_medulla_occipital_nucleus_thalamus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 1.55e-98 | 2 |
future caudate nucleus | 1.55e-98 | 2 |
caudate-putamen | 2.39e-66 | 3 |
dorsal striatum | 2.39e-66 | 3 |
corpus striatum | 3.10e-50 | 4 |
striatum | 3.10e-50 | 4 |
ventral part of telencephalon | 3.10e-50 | 4 |
future corpus striatum | 3.10e-50 | 4 |
telencephalic nucleus | 1.78e-29 | 7 |
basal ganglion | 2.62e-23 | 9 |
neural nucleus | 2.62e-23 | 9 |
nuclear complex of neuraxis | 2.62e-23 | 9 |
nucleus of brain | 2.62e-23 | 9 |
aggregate regional part of brain | 2.62e-23 | 9 |
collection of basal ganglia | 2.62e-23 | 9 |
cerebral subcortex | 2.62e-23 | 9 |
regional part of telencephalon | 1.82e-07 | 32 |
cerebral hemisphere | 1.82e-07 | 32 |
brain grey matter | 4.03e-07 | 34 |
gray matter | 4.03e-07 | 34 |
telencephalon | 4.03e-07 | 34 |