FFCP PHASE1:Hg19::chr18:25757899..25757912,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1000 | |EntrezGene=1000 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1759 | |HGNC=1759 | ||
|TSSclassifier=strong | |||
|UniProt=P19022 | |UniProt=P19022 | ||
|association_with_transcript=-454bp_to_NM_001792,uc002kwg.2_5end | |association_with_transcript=-454bp_to_NM_001792,uc002kwg.2_5end | ||
|cluster_id=chr18:25757899..25757912,- | |||
|description=CAGE_peak_5_at_CDH2_5end | |description=CAGE_peak_5_at_CDH2_5end | ||
|id=chr18:25757899..25757912,- | |id=chr18:25757899..25757912,- | ||
|ontology_enrichment_celltype=CL:0000055!1.02e-18!180;CL:0000359!1.32e-14!32;CL:0000192!1.41e-10!42;CL:0000514!1.41e-10!42;CL:0000680!8.47e-09!57;CL:0000056!8.47e-09!57;CL:0000355!8.47e-09!57;CL:0002334!1.21e-08!12;CL:0000393!2.78e-08!60;CL:0000211!2.78e-08!60;CL:0000187!3.94e-08!54;CL:0000057!1.72e-07!75;CL:0000183!2.57e-07!59;CL:0002539!4.60e-07!10 | |ontology_enrichment_celltype=CL:0000055!1.02e-18!180;CL:0000359!1.32e-14!32;CL:0000192!1.41e-10!42;CL:0000514!1.41e-10!42;CL:0000680!8.47e-09!57;CL:0000056!8.47e-09!57;CL:0000355!8.47e-09!57;CL:0002334!1.21e-08!12;CL:0000393!2.78e-08!60;CL:0000211!2.78e-08!60;CL:0000187!3.94e-08!54;CL:0000057!1.72e-07!75;CL:0000183!2.57e-07!59;CL:0002539!4.60e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.52e-14;32!CL:0002334;7.99e-11;12!CL:0000192;1.39e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.40e-16,32;CL:0002334,4.46e-11,12;CL:0000192,1.44e-10,43;CL:0000514,1.44e-10,43;CL:0000057,7.05e-08,76;CL:0000187,4.11e-07,55;CL:0002594,5.76e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;1.39e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.38e-21!194;UBERON:0001637!6.92e-15!42;UBERON:0003509!6.92e-15!42;UBERON:0004572!6.92e-15!42;UBERON:0004111!1.97e-14!241;UBERON:0005743!5.44e-14!86;UBERON:0000955!6.74e-14!69;UBERON:0006238!6.74e-14!69;UBERON:0003075!7.66e-14!86;UBERON:0007284!7.66e-14!86;UBERON:0001017!8.47e-14!82;UBERON:0000073!9.16e-14!94;UBERON:0001016!9.16e-14!94;UBERON:0003914!2.43e-13!118;UBERON:0000477!4.14e-13!286;UBERON:0004872!5.49e-13!84;UBERON:0000119!8.43e-13!312;UBERON:0000483!1.05e-12!309;UBERON:0001049!1.45e-12!57;UBERON:0005068!1.45e-12!57;UBERON:0006241!1.45e-12!57;UBERON:0007135!1.45e-12!57;UBERON:0002346!2.67e-12!90;UBERON:0002020!4.12e-12!34;UBERON:0003528!4.12e-12!34;UBERON:0001893!5.60e-12!34;UBERON:0000475!9.34e-12!365;UBERON:0002616!9.45e-12!59;UBERON:0004573!1.08e-11!33;UBERON:0004571!1.08e-11!33;UBERON:0001981!1.21e-11!60;UBERON:0007500!1.21e-11!60;UBERON:0004537!1.21e-11!60;UBERON:0006965!1.21e-11!60;UBERON:0002791!1.44e-11!33;UBERON:0001869!1.75e-11!32;UBERON:0002780!2.74e-11!41;UBERON:0001890!2.74e-11!41;UBERON:0006240!2.74e-11!41;UBERON:0000956!3.46e-11!25;UBERON:0000203!3.46e-11!25;UBERON:0003080!9.85e-11!42;UBERON:0001009!1.73e-10!113;UBERON:0007100!4.93e-10!27;UBERON:0001950!5.33e-10!20;UBERON:0003056!5.64e-10!61;UBERON:0002619!8.41e-10!22;UBERON:0000468!3.05e-09!659;UBERON:0004535!3.39e-09!110;UBERON:0002049!3.98e-09!79;UBERON:0007798!3.98e-09!79;UBERON:0000055!7.27e-09!69;UBERON:0000467!4.15e-08!625;UBERON:0000948!4.46e-08!24;UBERON:0005498!4.46e-08!24;UBERON:0004140!4.46e-08!24;UBERON:0009881!4.46e-08!24;UBERON:0004141!4.46e-08!24;UBERON:0003084!4.46e-08!24;UBERON:0007005!4.46e-08!24;UBERON:0004139!4.46e-08!24;UBERON:0004291!4.46e-08!24;UBERON:0000480!5.49e-08!626;UBERON:0000481!1.07e-07!347;UBERON:0000033!1.73e-07!123;UBERON:0001134!2.15e-07!61;UBERON:0002036!2.15e-07!61;UBERON:0003082!2.15e-07!61;UBERON:0000947!4.06e-07!21;UBERON:0010191!4.06e-07!21;UBERON:0004237!4.60e-07!10;UBERON:0004695!4.60e-07!10;UBERON:0002111!4.60e-07!10;UBERON:0004178!4.60e-07!10;UBERON:0002385!8.83e-07!63;UBERON:0001015!8.83e-07!63;UBERON:0000383!8.83e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.56e-13;33!UBERON:0004571;1.56e-13;33!UBERON:0000956;2.09e-12;25!UBERON:0000203;2.09e-12;25!UBERON:0001637;5.87e-12;42!UBERON:0003509;5.87e-12;42!UBERON:0004572;5.87e-12;42!UBERON:0002619;4.42e-11;22!UBERON:0001950;9.46e-11;20!UBERON:0007100;1.60e-09;25!UBERON:0001869;2.83e-09;32!UBERON:0002791;2.90e-09;32!UBERON:0003528;2.74e-08;34!UBERON:0002020;2.74e-08;34!UBERON:0001893;8.13e-08;34!UBERON:0003688;1.66e-07;6!UBERON:0002358;1.66e-07;6!UBERON:0003684;1.66e-07;6!UBERON:0001178;1.66e-07;6!UBERON:0002021;1.89e-07;5!UBERON:0000947;3.23e-07;21!UBERON:0010191;3.23e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.68e-18,42;UBERON:0003509,2.68e-18,42;UBERON:0004572,2.68e-18,42;UBERON:0004573,2.82e-15,33;UBERON:0004571,2.82e-15,33;UBERON:0000025,1.74e-14,192;UBERON:0004872,1.77e-14,83;UBERON:0007500,3.62e-13,59;UBERON:0001981,3.62e-13,59;UBERON:0004537,3.62e-13,59;UBERON:0006965,3.62e-13,59;UBERON:0001009,2.67e-12,112;UBERON:0000956,3.96e-12,25;UBERON:0000203,3.96e-12,25;UBERON:0003914,4.71e-12,117;UBERON:0000055,2.56e-11,68;UBERON:0002619,7.59e-11,22;UBERON:0001950,2.04e-10,20;UBERON:0004535,3.25e-10,109;UBERON:0007100,4.09e-10,27;UBERON:0002791,7.93e-10,32;UBERON:0001869,7.93e-10,32;UBERON:0002049,8.57e-10,78;UBERON:0007798,8.57e-10,78;UBERON:0004111,1.38e-09,240;UBERON:0003528,5.15e-09,34;UBERON:0002020,5.15e-09,34;UBERON:0001893,5.15e-09,34;UBERON:0004797,8.46e-08,7;UBERON:0003688,2.30e-07,6;UBERON:0002358,2.30e-07,6;UBERON:0003684,2.30e-07,6;UBERON:0001178,2.30e-07,6;UBERON:0000947,2.66e-07,21;UBERON:0010191,2.66e-07,21;UBERON:0002021,4.86e-07,5;UBERON:0000948,5.15e-07,24;UBERON:0005498,5.15e-07,24;UBERON:0004140,5.15e-07,24;UBERON:0009881,5.15e-07,24;UBERON:0004141,5.15e-07,24;UBERON:0003084,5.15e-07,24;UBERON:0007005,5.15e-07,24;UBERON:0004139,5.15e-07,24;UBERON:0004291,5.15e-07,24;UBERON:0001310,5.76e-07,4;UBERON:0002780,8.15e-07,41;UBERON:0001890,8.15e-07,41;UBERON:0003080,8.15e-07,41;UBERON:0006240,8.15e-07,41 | |||
|phase1_expression=1.2717486548939,1.92690471501885,3.80576891059122,1.0007329835313,0.893922188854576,1.74467704820074,0,0,0,0.491467873003018,0,0,0.263766978228454,0.123766352960047,0,2.01697543935533,0.602694528023977,0.730310090387373,1.46379839637152,0.369363174230364,0.204000691244253,0.626909442956176,1.43117993565528,1.23186982565596,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0.661743720148475,0.886917589850256,1.75669571386252,0.327447688744282,0,0,0.649094787309367,0.522389211897802,0.132957960518865,0,0,0,0.198762407366705,0,0,0.56530794192401,0.419499436209906,0,0.417989933073621,0,1.06729878806013,0,0,0,0,0,1.62028389576352,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,2.48485975847659,1.51956613997496,1.45650098894541,2.0078563452417,1.41867352879343,1.12135520028461,2.1349799145941,2.96001058100592,0.933633106199299,0,0.653847612453835,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0.300476117813194,0.794025282120147,1.4351170855109,0.427114777637135,0.423863802319124,3.00091096084402,0.103052529238439,1.54584324027377,0.930584281657949,2.02531598689519,1.26668106709558,1.00973509697646,0.276149695926898,0,0.710019185033229,0.806016785821122,1.18692414617341,0,0,0,0,0.132529768321485,0.232387885739037,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.330881918197182,0.435758888184812,0,0.134831308160164,0,0,0,0,1.2347220339942,4.41026134156626,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0,0,0,0,0.927443239800615,4.57893907519705,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0,0.43596006883328,0.07333828582095,6.33431407213111,0,0,2.6593811658487,1.04007436911366,0.257207374262142,0,0,0.285955987316295,0,0.823240336780769,0,0.355391948742546,0.791951872933429,2.1100756394171,0.871533458600294,4.79870357673874,0,0,0,2.39624855491583,0,0,0.579125226670317,0.410952645100767,0.358121926479791,0,0,0,0,2.54094624222463,0,0.773288812777695,0.670065061337395,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.356857977594324,0,0.35142424497814,0.300946099727719,2.27407504055985,1.03473071292505,0,1.47495334833363,0,0.195801157462741,0,0,0,0,0.303127571446259,0,0,3.47350930946288,2.91577749247319,3.64858122762996,5.63812256725084,1.53512174720011,8.36440389946759,4.45254199334973,0.616838775210622,1.42049380250502,0.246381468041427,1.55776328755086,0.464841513839837,0,0,0,0.68888668898764,0.364182336013434,0.262248829918848,0,0.847168708148562,0,0,1.05551628892876,0,0,0.647747748306418,0,0.270946437543853,0,0,0,0.447749509444357,0,0,0.256450125116389,0,0.325378394664303,0.206082023295445,0.27470839445503,0.330037999682352,0,0,0,0.386682873168488,0,0,0,0.107420244868274,0,0.170453254832202,0.267096106940212,0,0,0.127612712494584,0,0.929691098594572,5.35180989612088,4.1822236209636,0.924100740528266,1.06461206063404,1.73986598415015,3.89180860118232,2.28999818787186,0.372158369359667,0.316379424718726,0,0.255897791311334,0,2.86382923133343,1.56989728039846,0,0,0.117812402345686,0.808729926293264,0,1.26377536871694,0,1.94970791705028,0,0.136499911407986,0.141405431953713,2.26016233240486,3.85955740482287,1.99031692572366,1.31535265576129,0,0,1.82619339266434,1.239293992399,1.69017361519345,0.143411352204052,0.982490410131212,2.49669736036875,0,0,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0.556543525114529,0,0,0,0,0,1.1249555075237,0,0,0.629078458031288,0,0,0.0986434056369336,0,2.22273980289274,0,0.556608588971108,1.99613798001194,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0.173624994933292,0,0.723578631752448,0,1.3269511191747,0.886642856860642,0.658156191461918,0,0,0.230850775511391,1.02547850262301,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0.269604531922708,0,0.937057782901357,0,0,0,0,1.20990716048664,1.22429104652196,0,0.150323419414493,0.311064574191741,0,0,0.313932918407225,0,0,0,0.173559738335131,0,0.174118413160805,0,0.343972064943233,0,0,0,0.0969890164884194,0,1.35588444468319,0.411125773940253,0.19871461170299,1.07628353124994,0,0,0.426905989478705,0,0,0,1.20116498503375,0,0,0,1.35904206073614,2.61507115780833,0.101998217636322,0.866851769704557,0,0.410716136675979,0,3.0083580899397,0,0.279282401272254,1.60412296808179,1.43574604915363,1.59743200399193,4.29226048136571,2.67805748930247,3.09043973438941,8.64719720501769,2.32991899054908,0.315132729228895,0.164831716762333,0.0674035438541849,0,0,0,1.63444087333891,0.160753148465019,0,0.415440338029185,0,0,1.82248669974074,0,0.315222829196793,0.5245458813499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| ||
|short_description=p5@CDH2 | |short_description=p5@CDH2 | ||
}} | }} |
Latest revision as of 03:26, 19 September 2015
Short description: | p5@CDH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CDH2_5end |
Coexpression cluster: | NA |
Association with transcript: | -454bp_to_NM_001792, uc002kwg.2_5end |
EntrezGene: | CDH2 |
HGNC: | 1759 |
UniProt: | P19022 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.40e-16 | 32 |
preadipocyte | 4.46e-11 | 12 |
smooth muscle cell | 1.44e-10 | 43 |
smooth muscle myoblast | 1.44e-10 | 43 |
fibroblast | 7.05e-08 | 76 |
muscle cell | 4.11e-07 | 55 |
smooth muscle cell of the umbilical artery | 5.76e-07 | 4 |