FFCP PHASE1:Hg19::chr2:220379329..220379352,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55515 | |EntrezGene=55515 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21263 | |HGNC=21263 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=437bp_to_ENST00000461395_5end | |association_with_transcript=437bp_to_ENST00000461395_5end | ||
|cluster_id=chr2:220379329..220379352,+ | |||
|coexpression_cluster_id=C1102 | |||
|description=CAGE_peak_3_at_ACCN4_5end | |description=CAGE_peak_3_at_ACCN4_5end | ||
|id=chr2:220379329..220379352,+ | |id=chr2:220379329..220379352,+ | ||
|ontology_enrichment_celltype=CL:0002274!5.75e-08!5;CL:0000457!5.75e-08!5;CL:0002191!5.75e-08!5;CL:0000097!5.75e-08!5;CL:0000831!5.75e-08!5;CL:0002028!5.75e-08!5 | |ontology_enrichment_celltype=CL:0002274!5.75e-08!5;CL:0000457!5.75e-08!5;CL:0002191!5.75e-08!5;CL:0000097!5.75e-08!5;CL:0000831!5.75e-08!5;CL:0002028!5.75e-08!5 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,5.28e-09,108;CL:0000049,5.28e-09,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!5.44e-14!31;DOID:1036!4.40e-12!8;DOID:1240!7.24e-12!39;DOID:2531!3.46e-08!51;DOID:0060083!3.46e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.70e-35;31!DOID:1036;2.12e-29;8!DOID:1240;2.26e-21;39!DOID:2531;5.22e-15;51!DOID:0060083;5.22e-15;51!DOID:8552;3.76e-11;1!DOID:9119;4.80e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,7.38e-36,31;DOID:1036,2.19e-29,8;DOID:1240,3.53e-28,39;DOID:2531,3.63e-21,51;DOID:0060083,3.63e-21,51;DOID:8552,3.76e-11,1;DOID:9119,4.58e-11,1;DOID:0050686,1.16e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.38e-54!57;UBERON:0005068!2.38e-54!57;UBERON:0006241!2.38e-54!57;UBERON:0007135!2.38e-54!57;UBERON:0002616!3.26e-46!59;UBERON:0001017!3.78e-45!82;UBERON:0005743!6.87e-45!86;UBERON:0002780!7.97e-45!41;UBERON:0001890!7.97e-45!41;UBERON:0006240!7.97e-45!41;UBERON:0000955!1.00e-44!69;UBERON:0006238!1.00e-44!69;UBERON:0000073!5.16e-44!94;UBERON:0001016!5.16e-44!94;UBERON:0003080!1.41e-43!42;UBERON:0003075!6.26e-41!86;UBERON:0007284!6.26e-41!86;UBERON:0001893!2.00e-40!34;UBERON:0002020!2.11e-40!34;UBERON:0003528!2.11e-40!34;UBERON:0002346!1.33e-38!90;UBERON:0002791!1.34e-38!33;UBERON:0001869!2.31e-36!32;UBERON:0003056!7.22e-32!61;UBERON:0002619!3.49e-30!22;UBERON:0001950!8.28e-30!20;UBERON:0007023!1.43e-29!115;UBERON:0000956!3.99e-26!25;UBERON:0000203!3.99e-26!25;UBERON:0000033!2.17e-23!123;UBERON:0000153!8.41e-22!129;UBERON:0007811!8.41e-22!129;UBERON:0004121!1.40e-21!169;UBERON:0000924!8.44e-21!173;UBERON:0006601!8.44e-21!173;UBERON:0002308!3.73e-16!9;UBERON:0000125!3.73e-16!9;UBERON:0001871!2.48e-14!7;UBERON:0002420!1.26e-12!9;UBERON:0007245!1.26e-12!9;UBERON:0010009!1.26e-12!9;UBERON:0010011!1.26e-12!9;UBERON:0000454!1.26e-12!9;UBERON:0009663!3.11e-12!7;UBERON:0003076!1.01e-11!15;UBERON:0003057!1.01e-11!15;UBERON:0000025!4.90e-11!194;UBERON:0002298!2.97e-10!8;UBERON:0000200!1.09e-09!6;UBERON:0004733!4.65e-09!12;UBERON:0002028!4.65e-09!12;UBERON:0007277!4.65e-09!12;UBERON:0002021!2.77e-08!5;UBERON:0004732!2.79e-08!13;UBERON:0001872!5.97e-08!5;UBERON:0006331!7.99e-08!3;UBERON:0000988!1.20e-07!3;UBERON:0002771!1.26e-07!3;UBERON:0004111!5.27e-07!241 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@ACCN4 | |short_description=p3@ACCN4 | ||
}} | }} |
Latest revision as of 21:39, 24 September 2015
Short description: | p3@ACCN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ACCN4_5end |
Coexpression cluster: | C1102_acute_chronic_leukemia_Reticulocytes_dura_bone_Fibroblast |
Association with transcript: | 437bp_to_ENST00000461395_5end |
EntrezGene: | ACCN4 |
HGNC: | 21263 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 5.28e-09 | 108 |
common myeloid progenitor | 5.28e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.38e-36 | 31 |
chronic leukemia | 2.19e-29 | 8 |
leukemia | 3.53e-28 | 39 |
hematologic cancer | 3.63e-21 | 51 |
immune system cancer | 3.63e-21 | 51 |
chronic myeloid leukemia | 3.76e-11 | 1 |
acute myeloid leukemia | 4.58e-11 | 1 |
organ system cancer | 1.16e-09 | 137 |