FFCP PHASE1:Hg19::chr2:69810025..69810036,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:69810025..69810036,- | |||
|coexpression_cluster_id=C380 | |||
|description=CAGE_peak_at_chr2:69810025..69810036,- | |description=CAGE_peak_at_chr2:69810025..69810036,- | ||
|id=chr2:69810025..69810036,- | |id=chr2:69810025..69810036,- | ||
|ontology_enrichment_celltype=CL:0000763!2.94e-15!112;CL:0000049!2.94e-15!112;CL:0002274!6.32e-14!5;CL:0000457!6.32e-14!5;CL:0002191!6.32e-14!5;CL:0000097!6.32e-14!5;CL:0000831!6.32e-14!5;CL:0002028!6.32e-14!5;CL:0002032!5.69e-13!165;CL:0000837!5.69e-13!165;CL:0000037!3.37e-12!172;CL:0000566!3.37e-12!172;CL:0000988!3.37e-11!182;CL:0000764!1.22e-10!2;CL:0000765!1.22e-10!2;CL:0000050!1.22e-10!2;CL:0000038!1.22e-10!2;CL:0000558!1.22e-10!2;CL:0000547!1.22e-10!2;CL:0000549!1.22e-10!2;CL:0000550!1.22e-10!2;CL:0000552!1.22e-10!2;CL:0000839!3.68e-09!70;CL:0002031!3.14e-08!124;CL:0000163!8.81e-08!9;CL:0000557!1.63e-07!71 | |ontology_enrichment_celltype=CL:0000763!2.94e-15!112;CL:0000049!2.94e-15!112;CL:0002274!6.32e-14!5;CL:0000457!6.32e-14!5;CL:0002191!6.32e-14!5;CL:0000097!6.32e-14!5;CL:0000831!6.32e-14!5;CL:0002028!6.32e-14!5;CL:0002032!5.69e-13!165;CL:0000837!5.69e-13!165;CL:0000037!3.37e-12!172;CL:0000566!3.37e-12!172;CL:0000988!3.37e-11!182;CL:0000764!1.22e-10!2;CL:0000765!1.22e-10!2;CL:0000050!1.22e-10!2;CL:0000038!1.22e-10!2;CL:0000558!1.22e-10!2;CL:0000547!1.22e-10!2;CL:0000549!1.22e-10!2;CL:0000550!1.22e-10!2;CL:0000552!1.22e-10!2;CL:0000839!3.68e-09!70;CL:0002031!3.14e-08!124;CL:0000163!8.81e-08!9;CL:0000557!1.63e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000764;3.35e-66;2!CL:0000558;3.35e-66;2!CL:0000235;8.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.96e-66,2;CL:0000765,3.96e-66,2;CL:0000050,3.96e-66,2;CL:0000038,3.96e-66,2;CL:0000558,3.96e-66,2;CL:0000547,3.96e-66,2;CL:0000549,3.96e-66,2;CL:0000550,3.96e-66,2;CL:0000552,3.96e-66,2;CL:0000235,9.49e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0004140;3.05e-34;1!UBERON:0005062;1.12e-09;4!UBERON:0007284;1.12e-09;4 | |||
|ontology_enrichment_disease=DOID:8692!4.31e-10!31;DOID:1240!1.06e-07!39;DOID:2531!8.21e-07!51;DOID:0060083!8.21e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!3.18e-09!86;UBERON:0004765!2.26e-07!101;UBERON:0001434!2.26e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002146;1.84e-34;1!UBERON:0005623;1.84e-34;1!UBERON:0007100;1.11e-12;25!UBERON:0003978;1.85e-12;3!UBERON:0000946;1.85e-12;3!UBERON:0000948;4.86e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,1.84e-34,1;UBERON:0005623,1.84e-34,1;UBERON:0003978,1.85e-12,3;UBERON:0009751,1.85e-12,3;UBERON:0000946,1.85e-12,3;UBERON:0002523,1.85e-12,3;UBERON:0005983,1.85e-12,3;UBERON:0002165,1.85e-12,3;UBERON:0002062,1.85e-12,3;UBERON:0007280,1.85e-12,3;UBERON:0007100,8.01e-12,27 | |||
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| ||
|short_description=p@chr2:69810025..69810036,- | |short_description=p@chr2:69810025..69810036,- | ||
}} | }} |
Latest revision as of 11:45, 29 July 2015
Short description: | p@chr2:69810025..69810036, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:69810025..69810036, - |
Coexpression cluster: | C380_heart_left_throat_skeletal_mesothelioma_aorta_Mesothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.96e-66 | 2 |
erythroblast | 3.96e-66 | 2 |
megakaryocyte-erythroid progenitor cell | 3.96e-66 | 2 |
erythroid progenitor cell | 3.96e-66 | 2 |
reticulocyte | 3.96e-66 | 2 |
proerythroblast | 3.96e-66 | 2 |
basophilic erythroblast | 3.96e-66 | 2 |
polychromatophilic erythroblast | 3.96e-66 | 2 |
orthochromatic erythroblast | 3.96e-66 | 2 |
macrophage | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 1.84e-34 | 1 |
semi-lunar valve | 1.84e-34 | 1 |
valve | 1.85e-12 | 3 |
cardiac mesenchyme | 1.85e-12 | 3 |
cardial valve | 1.85e-12 | 3 |
tunica intima | 1.85e-12 | 3 |
heart layer | 1.85e-12 | 3 |
endocardium | 1.85e-12 | 3 |
endocardial cushion | 1.85e-12 | 3 |
presumptive endocardium | 1.85e-12 | 3 |
primary circulatory organ | 8.01e-12 | 27 |