FFCP PHASE1:Hg19::chr19:36245962..36245977,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:36245962..36245977,+ | |||
|coexpression_cluster_id=C339 | |||
|description=CAGE_peak_at_chr19:36245962..36245977,+ | |description=CAGE_peak_at_chr19:36245962..36245977,+ | ||
|id=chr19:36245962..36245977,+ | |id=chr19:36245962..36245977,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.07e-23!180;CL:0000187!8.43e-17!54;CL:0000680!1.24e-16!57;CL:0000056!1.24e-16!57;CL:0000355!1.24e-16!57;CL:0000183!9.63e-16!59;CL:0000192!1.34e-15!42;CL:0000514!1.34e-15!42;CL:0000057!4.53e-15!75;CL:0000393!1.53e-13!60;CL:0000211!1.53e-13!60;CL:0000136!4.07e-10!15;CL:0000359!2.60e-09!32;CL:0000048!1.29e-07!430;CL:0002334!2.38e-07!12;CL:0000723!5.57e-07!436;CL:0002570!6.96e-07!8;CL:0002539!8.94e-07!10 | |ontology_enrichment_celltype=CL:0000055!2.07e-23!180;CL:0000187!8.43e-17!54;CL:0000680!1.24e-16!57;CL:0000056!1.24e-16!57;CL:0000355!1.24e-16!57;CL:0000183!9.63e-16!59;CL:0000192!1.34e-15!42;CL:0000514!1.34e-15!42;CL:0000057!4.53e-15!75;CL:0000393!1.53e-13!60;CL:0000211!1.53e-13!60;CL:0000136!4.07e-10!15;CL:0000359!2.60e-09!32;CL:0000048!1.29e-07!430;CL:0002334!2.38e-07!12;CL:0000723!5.57e-07!436;CL:0002570!6.96e-07!8;CL:0002539!8.94e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.82e-12;13!CL:0002334;1.20e-08;12!CL:0000192;3.35e-08;43!CL:0002570;8.34e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.22e-15,15;CL:0000192,5.66e-11,43;CL:0000514,5.66e-11,43;CL:0000187,3.93e-09,55;CL:0002334,1.10e-08,12;CL:0000057,1.65e-08,76;CL:0000680,2.43e-08,58;CL:0000056,2.43e-08,58;CL:0000355,2.43e-08,58;CL:0000393,1.24e-07,61;CL:0000211,1.24e-07,61;CL:0000048,5.67e-07,427;CL:0002570,6.74e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000514;3.35e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!1.23e-20!63;UBERON:0001015!1.23e-20!63;UBERON:0000383!1.23e-20!63;UBERON:0001134!1.56e-19!61;UBERON:0002036!1.56e-19!61;UBERON:0003082!1.56e-19!61;UBERON:0004290!2.02e-18!70;UBERON:0000914!1.22e-17!83;UBERON:0002329!1.22e-17!83;UBERON:0003077!1.22e-17!83;UBERON:0003059!1.22e-17!83;UBERON:0007282!1.22e-17!83;UBERON:0009618!1.22e-17!83;UBERON:0007285!1.22e-17!83;UBERON:0000486!7.77e-15!82;UBERON:0005256!2.42e-12!143;UBERON:0000475!7.14e-12!365;UBERON:0001013!4.98e-11!14;UBERON:0001135!1.01e-09!15;UBERON:0000479!2.64e-09!787;UBERON:0004872!3.68e-08!84;UBERON:0002100!7.09e-08!216;UBERON:0000481!1.01e-07!347;UBERON:0002049!1.12e-07!79;UBERON:0007798!1.12e-07!79;UBERON:0004573!1.61e-07!33;UBERON:0004571!1.61e-07!33;UBERON:0001009!1.98e-07!113;UBERON:0000490!2.40e-07!138;UBERON:0004237!8.94e-07!10;UBERON:0004695!8.94e-07!10;UBERON:0002111!8.94e-07!10;UBERON:0004178!8.94e-07!10 | |ontology_enrichment_uberon=UBERON:0002385!1.23e-20!63;UBERON:0001015!1.23e-20!63;UBERON:0000383!1.23e-20!63;UBERON:0001134!1.56e-19!61;UBERON:0002036!1.56e-19!61;UBERON:0003082!1.56e-19!61;UBERON:0004290!2.02e-18!70;UBERON:0000914!1.22e-17!83;UBERON:0002329!1.22e-17!83;UBERON:0003077!1.22e-17!83;UBERON:0003059!1.22e-17!83;UBERON:0007282!1.22e-17!83;UBERON:0009618!1.22e-17!83;UBERON:0007285!1.22e-17!83;UBERON:0000486!7.77e-15!82;UBERON:0005256!2.42e-12!143;UBERON:0000475!7.14e-12!365;UBERON:0001013!4.98e-11!14;UBERON:0001135!1.01e-09!15;UBERON:0000479!2.64e-09!787;UBERON:0004872!3.68e-08!84;UBERON:0002100!7.09e-08!216;UBERON:0000481!1.01e-07!347;UBERON:0002049!1.12e-07!79;UBERON:0007798!1.12e-07!79;UBERON:0004573!1.61e-07!33;UBERON:0004571!1.61e-07!33;UBERON:0001009!1.98e-07!113;UBERON:0000490!2.40e-07!138;UBERON:0004237!8.94e-07!10;UBERON:0004695!8.94e-07!10;UBERON:0002111!8.94e-07!10;UBERON:0004178!8.94e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;8.73e-14;14!UBERON:0004457;7.83e-11;9!UBERON:0000042;7.83e-11;9!UBERON:0003688;4.45e-10;6!UBERON:0002358;4.45e-10;6!UBERON:0003684;4.45e-10;6!UBERON:0001178;4.45e-10;6!UBERON:0004905;1.96e-08;8!UBERON:0000982;1.96e-08;8!UBERON:0004770;1.96e-08;8!UBERON:0011135;1.86e-07;5!UBERON:0002216;1.86e-07;5!UBERON:0011134;1.86e-07;5!UBERON:0002209;1.86e-07;5!UBERON:0002213;1.86e-07;5!UBERON:0007844;1.86e-07;5!UBERON:0011138;1.86e-07;5!UBERON:0001130;1.86e-07;5!UBERON:0001066;1.86e-07;5!UBERON:0001468;1.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,6.56e-14,14;UBERON:0002385,4.50e-12,64;UBERON:0001015,4.50e-12,64;UBERON:0000383,4.50e-12,64;UBERON:0001134,1.54e-11,62;UBERON:0002036,1.54e-11,62;UBERON:0003082,1.54e-11,62;UBERON:0007524,3.10e-11,73;UBERON:0002329,6.02e-11,71;UBERON:0003059,6.02e-11,71;UBERON:0007282,6.02e-11,71;UBERON:0004290,6.02e-11,71;UBERON:0009618,6.02e-11,71;UBERON:0003104,1.05e-10,160;UBERON:0009142,1.05e-10,160;UBERON:0003077,1.11e-10,72;UBERON:0007285,1.11e-10,72;UBERON:0005256,1.44e-10,122;UBERON:0003688,4.78e-10,6;UBERON:0002358,4.78e-10,6;UBERON:0003684,4.78e-10,6;UBERON:0001178,4.78e-10,6;UBERON:0000486,7.28e-10,83;UBERON:0000926,1.12e-09,315;UBERON:0004120,1.12e-09,315;UBERON:0006603,1.12e-09,315;UBERON:0007503,3.05e-09,78;UBERON:0004905,1.51e-08,8;UBERON:0000982,1.51e-08,8;UBERON:0004770,1.51e-08,8;UBERON:0004457,9.35e-08,12;UBERON:0000042,9.35e-08,12;UBERON:0011135,1.94e-07,5;UBERON:0002216,1.94e-07,5;UBERON:0011134,1.94e-07,5;UBERON:0002209,1.94e-07,5;UBERON:0002213,1.94e-07,5;UBERON:0005856,1.94e-07,5;UBERON:0005866,1.94e-07,5;UBERON:0005863,1.94e-07,5;UBERON:0007844,1.94e-07,5;UBERON:0011138,1.94e-07,5;UBERON:0001130,1.94e-07,5;UBERON:0001066,1.94e-07,5;UBERON:0001468,1.94e-07,5;UBERON:0002100,2.72e-07,199 | |||
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| ||
|short_description=p@chr19:36245962..36245977,+ | |short_description=p@chr19:36245962..36245977,+ | ||
}} | }} |
Latest revision as of 06:50, 26 July 2015
Short description: | p@chr19:36245962..36245977, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:36245962..36245977, + |
Coexpression cluster: | C339_Mesenchymal_heart_leiomyoma_Adipocyte_Smooth_skeletal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.22e-15 | 15 |
smooth muscle cell | 5.66e-11 | 43 |
smooth muscle myoblast | 5.66e-11 | 43 |
muscle cell | 3.93e-09 | 55 |
preadipocyte | 1.10e-08 | 12 |
fibroblast | 1.65e-08 | 76 |
muscle precursor cell | 2.43e-08 | 58 |
myoblast | 2.43e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.43e-08 | 58 |
electrically responsive cell | 1.24e-07 | 61 |
electrically active cell | 1.24e-07 | 61 |
multi fate stem cell | 5.67e-07 | 427 |
mesenchymal stem cell of adipose | 6.74e-07 | 8 |