FFCP PHASE1:Hg19::chr12:130617921..130617932,+: Difference between revisions
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|id=chr12:130617921..130617932,+
|short_description=p@chr12:130617921..130617932,+
|description=CAGE_peak_at_chr12:130617921..130617932,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:130617921..130617932,+ | |||
|coexpression_cluster_id=C127 | |||
|description=CAGE_peak_at_chr12:130617921..130617932,+ | |||
|id=chr12:130617921..130617932,+ | |||
|ontology_enrichment_celltype=CL:0002150!6.22e-22!3;CL:0000861!6.22e-22!3;CL:0000066!1.82e-08!254;CL:0000235!6.09e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000214;1.83e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,2.09e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.69e-21;2 | |||
|ontology_enrichment_disease=DOID:305!2.06e-18!106;DOID:0050687!1.77e-14!143;DOID:0050619!6.03e-09!1;DOID:1357!6.03e-09!1;DOID:162!2.15e-08!235;DOID:14566!3.85e-08!239;DOID:5409!3.94e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:0050619;8.10e-41;1!DOID:1357;8.10e-41;1!DOID:5409;2.66e-11;4!DOID:0050615;5.28e-11;16!DOID:1325;5.22e-07;7!DOID:3904;5.22e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,9.91e-41,1;DOID:1357,9.91e-41,1;DOID:5409,2.53e-11,4;DOID:0050615,5.28e-11,16;DOID:1325,5.08e-07,7;DOID:3904,5.08e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001737!9.44e-63!9;UBERON:0001557!4.66e-29!19;UBERON:0008947!8.11e-21!38;UBERON:0003258!8.11e-21!38;UBERON:0000072!7.26e-17!46;UBERON:0000065!2.19e-14!53;UBERON:0001004!3.59e-12!72;UBERON:0001764!6.03e-09!1;UBERON:0001825!6.03e-09!1;UBERON:0001301!6.50e-09!1;UBERON:0000989!1.18e-08!1;UBERON:0008811!1.18e-08!1;UBERON:0006258!1.18e-08!1;UBERON:0005876!1.18e-08!1;UBERON:0004874!1.18e-08!1;UBERON:0006834!2.46e-08!1;UBERON:0001041!2.75e-08!98;UBERON:0000063!5.30e-07!97;UBERON:0000077!7.25e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;8.10e-41;1!UBERON:0001825;8.10e-41;1!UBERON:0001301;2.21e-40;1!UBERON:0006915;1.83e-14;3!UBERON:0007616;1.83e-14;3!UBERON:0002217;1.83e-14;3!UBERON:0002018;1.83e-14;3!UBERON:0006947;1.83e-14;3!UBERON:0004054;1.83e-14;3!UBERON:0005904;3.42e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,9.91e-41,1;UBERON:0001825,9.91e-41,1;UBERON:0001301,1.48e-40,1;UBERON:0006947,1.60e-14,3;UBERON:0004054,1.60e-14,3;UBERON:0006915,2.09e-14,3;UBERON:0007616,2.09e-14,3;UBERON:0002217,2.09e-14,3;UBERON:0002018,2.09e-14,3;UBERON:0005904,3.10e-11,4 | |||
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|short_description=p@chr12:130617921..130617932,+ | |||
}} | }} |
Latest revision as of 06:44, 24 July 2015
Short description: | p@chr12:130617921..130617932, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:130617921..130617932, + |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 2.09e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 9.91e-41 | 1 |
paranasal sinus | 9.91e-41 | 1 |
epididymis | 1.48e-40 | 1 |
male genital duct | 1.60e-14 | 3 |
internal male genitalia | 1.60e-14 | 3 |
stratified squamous epithelium | 2.09e-14 | 3 |
layer of synovial tissue | 2.09e-14 | 3 |
synovial joint | 2.09e-14 | 3 |
synovial membrane of synovial joint | 2.09e-14 | 3 |
duct of male reproductive system | 3.10e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 9.91e-41 | 1 |
maxillary sinus cancer | 9.91e-41 | 1 |
lung small cell carcinoma | 2.53e-11 | 4 |
respiratory system cancer | 5.28e-11 | 16 |
bronchus cancer | 5.08e-07 | 7 |
bronchogenic carcinoma | 5.08e-07 | 7 |