FFCP PHASE1:Hg19::chr3:12045814..12045834,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6854 | |EntrezGene=6854 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=11495 | |HGNC=11495 | ||
|TSSclassifier=strong | |||
|UniProt=F5H7H8,Q86VA8 | |UniProt=F5H7H8,Q86VA8 | ||
|association_with_transcript=-27bp_to_ENST00000540660,NM_003178,NM_133625,uc003bwl.1,uc003bwm.2_5end | |association_with_transcript=-27bp_to_ENST00000540660,NM_003178,NM_133625,uc003bwl.1,uc003bwm.2_5end | ||
|cluster_id=chr3:12045814..12045834,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_SYN2_5end | |description=CAGE_peak_2_at_SYN2_5end | ||
|id=chr3:12045814..12045834,+ | |id=chr3:12045814..12045834,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.25e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.50e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.46e-15;82!UBERON:0009117;4.56e-07;10!UBERON:0005564;4.56e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.87e-42!57;UBERON:0005068!8.87e-42!57;UBERON:0006241!8.87e-42!57;UBERON:0007135!8.87e-42!57;UBERON:0007023!2.06e-38!115;UBERON:0005743!1.78e-36!86;UBERON:0003075!5.07e-36!86;UBERON:0007284!5.07e-36!86;UBERON:0001017!1.49e-35!82;UBERON:0000073!6.53e-35!94;UBERON:0001016!6.53e-35!94;UBERON:0002346!5.50e-34!90;UBERON:0002616!5.69e-34!59;UBERON:0000955!2.84e-32!69;UBERON:0006238!2.84e-32!69;UBERON:0003080!1.94e-30!42;UBERON:0002780!1.12e-29!41;UBERON:0001890!1.12e-29!41;UBERON:0006240!1.12e-29!41;UBERON:0000033!9.82e-28!123;UBERON:0003056!3.99e-27!61;UBERON:0000153!1.15e-25!129;UBERON:0007811!1.15e-25!129;UBERON:0002020!7.24e-25!34;UBERON:0003528!7.24e-25!34;UBERON:0001893!8.97e-25!34;UBERON:0004121!2.44e-24!169;UBERON:0002791!7.03e-24!33;UBERON:0001869!1.16e-23!32;UBERON:0000924!1.64e-23!173;UBERON:0006601!1.64e-23!173;UBERON:0002619!6.46e-20!22;UBERON:0001950!4.21e-18!20;UBERON:0000956!1.84e-17!25;UBERON:0000203!1.84e-17!25;UBERON:0004111!1.85e-13!241;UBERON:0000475!3.13e-13!365;UBERON:0003076!3.30e-12!15;UBERON:0003057!3.30e-12!15;UBERON:0000481!4.04e-12!347;UBERON:0000025!4.81e-12!194;UBERON:0000477!6.28e-11!286;UBERON:0004733!5.80e-10!12;UBERON:0002028!5.80e-10!12;UBERON:0007277!5.80e-10!12;UBERON:0000922!1.22e-09!612;UBERON:0002420!3.29e-09!9;UBERON:0007245!3.29e-09!9;UBERON:0010009!3.29e-09!9;UBERON:0010011!3.29e-09!9;UBERON:0000454!3.29e-09!9;UBERON:0000064!4.32e-09!219;UBERON:0002308!6.09e-09!9;UBERON:0000125!6.09e-09!9;UBERON:0004732!7.66e-09!13;UBERON:0000483!2.19e-08!309;UBERON:0000119!3.00e-08!312;UBERON:0000468!4.56e-08!659;UBERON:0002050!6.70e-08!605;UBERON:0005423!6.70e-08!605;UBERON:0000062!1.03e-07!511;UBERON:0000923!1.10e-07!604;UBERON:0005291!1.10e-07!604;UBERON:0006598!1.10e-07!604;UBERON:0002532!1.10e-07!604;UBERON:0002680!1.15e-07!9;UBERON:0001895!1.15e-07!9;UBERON:0010092!1.15e-07!9;UBERON:0000467!1.65e-07!625;UBERON:0002298!1.76e-07!8;UBERON:0000480!2.09e-07!626;UBERON:0009663!2.73e-07!7;UBERON:0000200!4.43e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.37e-40;32!UBERON:0001893;1.17e-38;34!UBERON:0003528;1.74e-38;34!UBERON:0002020;1.74e-38;34!UBERON:0002619;5.14e-38;22!UBERON:0002791;2.32e-37;32!UBERON:0002780;2.34e-37;41!UBERON:0001890;2.34e-37;41!UBERON:0000073;7.08e-37;53!UBERON:0002616;7.08e-37;53!UBERON:0001950;1.85e-34;20!UBERON:0000956;9.93e-33;25!UBERON:0000203;9.93e-33;25!UBERON:0001017;5.76e-26;75!UBERON:0000955;1.47e-25;68!UBERON:0001016;1.33e-22;83!UBERON:0002420;8.30e-14;9!UBERON:0007245;8.30e-14;9!UBERON:0010009;8.30e-14;9!UBERON:0010011;8.30e-14;9!UBERON:0000454;8.30e-14;9!UBERON:0004733;1.23e-13;12!UBERON:0002028;1.23e-13;12!UBERON:0000125;2.52e-13;9!UBERON:0002308;2.52e-13;9!UBERON:0007023;4.96e-13;114!UBERON:0004732;2.15e-12;13!UBERON:0000200;2.69e-12;6!UBERON:0002298;5.86e-11;6!UBERON:0000349;1.18e-10;5!UBERON:0001871;2.05e-10;6!UBERON:0011216;2.70e-10;132!UBERON:0000922;2.76e-10;49!UBERON:0002021;2.88e-10;5!UBERON:0009663;3.64e-10;7!UBERON:0001872;3.73e-10;5!UBERON:0002680;2.44e-09;9!UBERON:0001895;2.44e-09;9!UBERON:0000369;7.43e-09;4!UBERON:0002435;7.43e-09;4!UBERON:0000204;7.43e-09;4!UBERON:0001894;1.61e-08;7!UBERON:0005383;4.09e-07;3!UBERON:0005382;4.09e-07;3!UBERON:0001870;6.59e-07;3!UBERON:0000473;6.60e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.50e-69,56;UBERON:0005068,2.50e-69,56;UBERON:0006241,2.50e-69,56;UBERON:0007135,2.50e-69,56;UBERON:0001017,7.85e-65,81;UBERON:0000073,1.16e-64,53;UBERON:0002616,1.16e-64,53;UBERON:0001016,5.54e-63,89;UBERON:0000955,2.18e-56,68;UBERON:0006238,2.18e-56,68;UBERON:0002780,9.99e-52,41;UBERON:0001890,9.99e-52,41;UBERON:0003080,9.99e-52,41;UBERON:0006240,9.99e-52,41;UBERON:0003075,4.34e-46,82;UBERON:0007284,4.34e-46,82;UBERON:0001869,6.89e-45,32;UBERON:0003528,8.54e-45,34;UBERON:0002020,8.54e-45,34;UBERON:0001893,1.29e-44,34;UBERON:0002346,3.42e-43,86;UBERON:0002791,1.60e-41,32;UBERON:0007023,2.16e-39,114;UBERON:0002619,5.09e-38,22;UBERON:0010371,4.21e-36,104;UBERON:0003056,1.27e-34,61;UBERON:0001950,1.83e-34,20;UBERON:0000956,9.85e-33,25;UBERON:0000203,9.85e-33,25;UBERON:0004121,6.70e-32,171;UBERON:0000924,6.70e-32,171;UBERON:0006601,6.70e-32,171;UBERON:0011216,3.79e-29,223;UBERON:0010314,2.29e-26,132;UBERON:0003076,6.38e-18,15;UBERON:0003057,6.38e-18,15;UBERON:0000025,3.20e-15,192;UBERON:0002420,8.42e-14,9;UBERON:0007245,8.42e-14,9;UBERON:0010009,8.42e-14,9;UBERON:0010011,8.42e-14,9;UBERON:0000454,8.42e-14,9;UBERON:0004733,1.20e-13,12;UBERON:0002028,1.20e-13,12;UBERON:0007277,1.20e-13,12;UBERON:0000125,2.49e-13,9;UBERON:0002308,2.49e-13,9;UBERON:0004732,2.11e-12,13;UBERON:0000200,2.63e-12,6;UBERON:0004111,5.18e-12,240;UBERON:0002298,5.89e-11,6;UBERON:0000349,1.19e-10,5;UBERON:0001871,2.06e-10,6;UBERON:0002021,2.87e-10,5;UBERON:0009663,3.68e-10,7;UBERON:0001872,3.71e-10,5;UBERON:0000922,4.79e-10,592;UBERON:0002680,2.34e-09,9;UBERON:0001895,2.34e-09,9;UBERON:0010092,2.34e-09,9;UBERON:0000369,7.46e-09,4;UBERON:0002435,7.46e-09,4;UBERON:0000204,7.46e-09,4;UBERON:0010082,7.46e-09,4;UBERON:0001894,2.06e-08,7;UBERON:0006222,2.06e-08,7;UBERON:0005383,4.10e-07,3;UBERON:0005382,4.10e-07,3;UBERON:0001870,6.60e-07,3;UBERON:0000473,7.09e-07,8 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0,0,0,0.672325146451775,0,0,0,0.861847406537515,0.204000691244253,1.56727360739044,0,0.136874425072884,0,0,0.0821005894499457,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0.520237390239513,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.283604451492204,0.443458794925128,0.351339142772504,9.82343066232845,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.337834441449967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0.234321431833797,0.624320153660641,0,0.448346041655403,0.23486899728753,0.323745888736263,0,0.408308342509787,0.122834317311768,0.103325781175765,0,0,0.910161361938026,0,0.336672227908132,0.375355559615893,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,1.34171076742555,2.51806559810822,1.74290914304278,1.14027160516907,1.51392510525377,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0.201057944823262,0,0,0,0,1.39116485970092,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0.335964256397719,0,0.0895585227028483,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0.355123450626254,0,0,0,0,0.200506470303285,0.184161977871793,0,0,0,0,0.462092022626489,0.784349769176855,0,0.422206515571503,1.13733384070897,0.340187410553031,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0.512900250232778,0,0.976135183992909,0.206082023295445,0,0,0,0,0,0,0,0,0.413509717453592,0,0,0.255679882248303,0,0.165284915360978,0.192190067365106,0.127612712494584,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.424216295861138,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0.143411352204052,0.294747123039363,0,0,0,0,0,0.699869440489966,0,0,0,0.0941438007767792,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,7.69983884210687,0.490080431962063,0,0,0,1.59426272728822,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0.447352215784832,0.333698283423817,0,0,0,0.540911356951966,0,0,0,0.293016358543788,5.4612234787281,0,4.2620422020962,0,0,0,114.326979493124,97.3432361560748,0,0,0.63337622438398,0.996239941255349,0.276283915531148,0,0,0,0,0,0,0,0.295930216910801,0,0,80.4546179259031,35.1591092033416,39.9227596002388,0,0,4.34999745260876,0.1137934482855,0,0.945550727071745,2.41320361269025,2.04123229368278,3.47249989866585,63.7733797785964,71.8754774207431,39.6712514424416,22.3370105061074,28.9636666574477,33.7853511617118,0,0.139423744278603,0.923403102045565,0,0.46112780877612,0.0897576444097721,0.651884231532048,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.353830258013357,1.83309043480088,1.48260564340311,1.35920332841153,1.67075119208729,2.49384192028505,0,33.9683446301742,0,0,0.728341138602278,0.394584402849391,0,14.385419796633,2.0851571277401,0.150323419414493,0.72581733978073,5.31723098165748,5.29587129400798,5.02292669451561,2.38944859545918,0,0,0,0,0,1.39781334593624,0,0,0,0,0.387956065953678,0,2.48578814858586,0,0.19871461170299,40.3289770238947,0.391102765469606,0,0.213452994739353,1.19885765749278,0.72045208577053,0,0,0,0.248505071130865,0,0,0,0,0.288950589901519,46.2323622306538,8.76194424908756,0,0,0.788662062837943,0.837847203816763,0,0,0,0.429226048136571,0,0.201550417460179,0,0,0,0,0,0,0,73.9563611522652,44.8109206107084,3.53656926623042,3.57602535152808,1.66176135211674,0,0,57.8943274950975,0,0.788057072991982,0.104909176269996,0,0,0,0,0,0.25426853765475,0,0,0,0,0.246277562248017,0,0,0.146552233678082,0,35.8113789121495,13.8844231829824,0,0,0.320362237703084,0.78602152549833,1.65695622138878,0.496166021811951,0,0,0,0,0,0,0,2.51286554000375,72.6575907572929,93.9602239745116,60.4672195312394,7.45431954397093,7.76503360757966,10.4942920970938,8.71596400098254,0,0,0,0,2.34167452903441,6.95620937331961,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,1.54400723580486,0,0,0,0.168942440653073,0,0,0,60.0041612898511,0,0,0,0.327609848846413,0,0,0.79994958341972,0.106691729694141,0,0,0,0,0,2.04630994085843,4.42081726726395,0,1.31051565830417,0,0,0,0,0,0,0,0,0,51.3191508520712,65.1804251097691,40.8662679186307,78.9698002326907,25.7113130146152,46.4736736559544,93.17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| ||
|short_description=p2@SYN2 | |short_description=p2@SYN2 | ||
}} | }} |
Latest revision as of 22:20, 19 September 2015
Short description: | p2@SYN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SYN2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -27bp_to_ENST00000540660, NM_003178, NM_133625, uc003bwl.1, uc003bwm.2_5end |
EntrezGene: | SYN2 |
HGNC: | 11495 |
UniProt: | F5H7H8Q86VA8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.50e-07 | 5 |