FFCP PHASE1:Hg19::chr3:124606201..124606223,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3693 | |EntrezGene=3693 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6160 | |HGNC=6160 | ||
|TSSclassifier=strong | |||
|UniProt=P18084 | |UniProt=P18084 | ||
|association_with_transcript=-57bp_to_ENST00000296181,NM_002213,uc003eho.2_5end | |association_with_transcript=-57bp_to_ENST00000296181,NM_002213,uc003eho.2_5end | ||
|cluster_id=chr3:124606201..124606223,- | |||
|coexpression_cluster_id=C2716 | |||
|description=CAGE_peak_2_at_ITGB5_5end | |description=CAGE_peak_2_at_ITGB5_5end | ||
|id=chr3:124606201..124606223,- | |id=chr3:124606201..124606223,- | ||
|ontology_enrichment_celltype=CL:0000055!1.23e-30!180;CL:0000222!7.56e-16!119;CL:0000057!1.13e-15!75;CL:0000220!6.25e-15!246;CL:0002321!8.38e-15!248;CL:0000680!1.20e-12!57;CL:0000056!1.20e-12!57;CL:0000355!1.20e-12!57;CL:0000192!1.40e-12!42;CL:0000514!1.40e-12!42;CL:0000183!5.96e-12!59;CL:0000187!1.94e-11!54;CL:0000359!2.60e-11!32;CL:0000393!1.01e-09!60;CL:0000211!1.01e-09!60;CL:0000548!1.24e-09!679;CL:0000004!1.24e-09!679;CL:0000255!1.24e-09!679;CL:0000012!6.39e-09!682;CL:0000136!2.53e-08!15;CL:0002371!1.59e-07!591;CL:0000144!2.99e-07!625;CL:0000066!4.17e-07!254;CL:0002334!7.46e-07!12 | |ontology_enrichment_celltype=CL:0000055!1.23e-30!180;CL:0000222!7.56e-16!119;CL:0000057!1.13e-15!75;CL:0000220!6.25e-15!246;CL:0002321!8.38e-15!248;CL:0000680!1.20e-12!57;CL:0000056!1.20e-12!57;CL:0000355!1.20e-12!57;CL:0000192!1.40e-12!42;CL:0000514!1.40e-12!42;CL:0000183!5.96e-12!59;CL:0000187!1.94e-11!54;CL:0000359!2.60e-11!32;CL:0000393!1.01e-09!60;CL:0000211!1.01e-09!60;CL:0000548!1.24e-09!679;CL:0000004!1.24e-09!679;CL:0000255!1.24e-09!679;CL:0000012!6.39e-09!682;CL:0000136!2.53e-08!15;CL:0002371!1.59e-07!591;CL:0000144!2.99e-07!625;CL:0000066!4.17e-07!254;CL:0002334!7.46e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.55e-11;32!CL:0000134;2.21e-10;55!CL:0000192;2.98e-09;43!CL:0000048;9.14e-09;58!CL:0000723;4.51e-08;61!CL:0000136;9.25e-08;13!CL:0000349;1.22e-07;19!CL:0002320;1.38e-07;188!CL:0002334;5.18e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.88e-16,76;CL:0000222,3.66e-16,121;CL:0002321,1.40e-14,250;CL:0000680,9.85e-13,58;CL:0000056,9.85e-13,58;CL:0000355,9.85e-13,58;CL:0000192,1.32e-12,43;CL:0000514,1.32e-12,43;CL:0000187,1.65e-11,55;CL:0000359,1.73e-11,32;CL:0000393,1.01e-09,61;CL:0000211,1.01e-09,61;CL:0000136,1.90e-08,15;CL:0000349,1.28e-07,19;CL:0002334,5.96e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;2.98e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.34e-19!118;UBERON:0002100!4.94e-18!216;UBERON:0005256!4.59e-17!143;UBERON:0004872!8.30e-17!84;UBERON:0000468!7.51e-15!659;UBERON:0000475!6.69e-14!365;UBERON:0001981!1.03e-13!60;UBERON:0007500!1.03e-13!60;UBERON:0004537!1.03e-13!60;UBERON:0006965!1.03e-13!60;UBERON:0002049!1.16e-13!79;UBERON:0007798!1.16e-13!79;UBERON:0001637!1.18e-13!42;UBERON:0003509!1.18e-13!42;UBERON:0004572!1.18e-13!42;UBERON:0000490!1.32e-13!138;UBERON:0000486!1.52e-13!82;UBERON:0000914!2.02e-13!83;UBERON:0002329!2.02e-13!83;UBERON:0003077!2.02e-13!83;UBERON:0003059!2.02e-13!83;UBERON:0007282!2.02e-13!83;UBERON:0009618!2.02e-13!83;UBERON:0007285!2.02e-13!83;UBERON:0000055!6.23e-13!69;UBERON:0003104!2.13e-12!238;UBERON:0009142!2.13e-12!238;UBERON:0004290!2.13e-12!70;UBERON:0000119!5.23e-12!312;UBERON:0000483!6.74e-12!309;UBERON:0000467!7.99e-12!625;UBERON:0001009!1.19e-11!113;UBERON:0000480!1.22e-11!626;UBERON:0000926!1.33e-11!448;UBERON:0004120!1.33e-11!448;UBERON:0006603!1.33e-11!448;UBERON:0004573!1.67e-11!33;UBERON:0004571!1.67e-11!33;UBERON:0004535!1.69e-11!110;UBERON:0001134!4.87e-11!61;UBERON:0002036!4.87e-11!61;UBERON:0003082!4.87e-11!61;UBERON:0002385!5.61e-11!63;UBERON:0001015!5.61e-11!63;UBERON:0000383!5.61e-11!63;UBERON:0000477!3.42e-10!286;UBERON:0000481!1.98e-09!347;UBERON:0000947!2.86e-08!21;UBERON:0010191!2.86e-08!21;UBERON:0004111!3.69e-08!241;UBERON:0003102!9.28e-08!95;UBERON:0002199!1.13e-07!45;UBERON:0002416!1.13e-07!45;UBERON:0000923!1.31e-07!604;UBERON:0005291!1.31e-07!604;UBERON:0006598!1.31e-07!604;UBERON:0002532!1.31e-07!604;UBERON:0002050!1.34e-07!605;UBERON:0005423!1.34e-07!605;UBERON:0000922!1.76e-07!612;UBERON:0001013!2.55e-07!14;UBERON:0001048!3.32e-07!168;UBERON:0000025!4.28e-07!194;UBERON:0009569!6.42e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.14e-10;33!UBERON:0004571;1.14e-10;33!UBERON:0001637;3.85e-10;42!UBERON:0003509;3.85e-10;42!UBERON:0004572;3.85e-10;42!UBERON:0000947;2.26e-08;21!UBERON:0010191;2.26e-08;21!UBERON:0003914;1.24e-07;74!UBERON:0007500;1.33e-07;56!UBERON:0001981;1.33e-07;56!UBERON:0004537;1.33e-07;56!UBERON:0001013;2.40e-07;14!UBERON:0002384;3.30e-07;198 | |||
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| ||
|short_description=p2@ITGB5 | |short_description=p2@ITGB5 | ||
}} | }} |
Latest revision as of 02:42, 20 September 2015
Short description: | p2@ITGB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ITGB5_5end |
Coexpression cluster: | C2716_Osteoblast_leiomyoma_Preadipocyte_Adipocyte_mesenchymal_Smooth_Mesothelial |
Association with transcript: | -57bp_to_ENST00000296181, NM_002213, uc003eho.2_5end |
EntrezGene: | ITGB5 |
HGNC: | 6160 |
UniProt: | P18084 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.88e-16 | 76 |
mesodermal cell | 3.66e-16 | 121 |
embryonic cell | 1.40e-14 | 250 |
muscle precursor cell | 9.85e-13 | 58 |
myoblast | 9.85e-13 | 58 |
multi-potent skeletal muscle stem cell | 9.85e-13 | 58 |
smooth muscle cell | 1.32e-12 | 43 |
smooth muscle myoblast | 1.32e-12 | 43 |
muscle cell | 1.65e-11 | 55 |
vascular associated smooth muscle cell | 1.73e-11 | 32 |
electrically responsive cell | 1.01e-09 | 61 |
electrically active cell | 1.01e-09 | 61 |
fat cell | 1.90e-08 | 15 |
extraembryonic cell | 1.28e-07 | 19 |
preadipocyte | 5.96e-07 | 12 |