FFCP PHASE1:Hg19::chr3:146262434..146262446,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5359 | |EntrezGene=5359 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9092 | |HGNC=9092 | ||
|TSSclassifier=strong | |||
|UniProt=C9J0H3 | |UniProt=C9J0H3 | ||
|association_with_transcript=-6bp_to_ENST00000486631_5end | |association_with_transcript=-6bp_to_ENST00000486631_5end | ||
|cluster_id=chr3:146262434..146262446,- | |||
|description=CAGE_peak_4_at_PLSCR1_5end | |description=CAGE_peak_4_at_PLSCR1_5end | ||
|id=chr3:146262434..146262446,- | |id=chr3:146262434..146262446,- | ||
|ontology_enrichment_celltype=CL:0000066!1.18e-11!254 | |ontology_enrichment_celltype=CL:0000066!1.18e-11!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.11e-11,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.19e-16!106;DOID:0050687!4.32e-15!143;DOID:162!2.78e-12!235;DOID:14566!9.90e-12!239;DOID:1749!8.82e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.73e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.44e-16,106;DOID:0050687,1.69e-15,143;DOID:162,8.90e-13,235;DOID:14566,3.79e-12,239;DOID:1749,7.52e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001007!7.34e-15!155;UBERON:0001555!7.34e-15!155;UBERON:0007026!7.34e-15!155;UBERON:0004119!6.09e-14!169;UBERON:0000925!6.09e-14!169;UBERON:0006595!6.09e-14!169;UBERON:0004921!8.87e-11!129;UBERON:0004185!8.87e-11!129;UBERON:0000077!5.78e-10!130;UBERON:0003104!9.84e-09!238;UBERON:0009142!9.84e-09!238;UBERON:0005409!1.25e-07!35 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,4.71e-13,145;UBERON:0001555,4.71e-13,145;UBERON:0007026,4.71e-13,145;UBERON:0004119,1.37e-12,160;UBERON:0000925,1.37e-12,160;UBERON:0006595,1.37e-12,160;UBERON:0004921,2.82e-09,118 | |||
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| ||
|short_description=p4@PLSCR1 | |short_description=p4@PLSCR1 | ||
}} | }} |
Latest revision as of 07:04, 25 September 2015
Short description: | p4@PLSCR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PLSCR1_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000486631_5end |
EntrezGene: | PLSCR1 |
HGNC: | 9092 |
UniProt: | C9J0H3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.11e-11 | 253 |
Ontology term | p-value | n |
---|---|---|
digestive system | 4.71e-13 | 145 |
digestive tract | 4.71e-13 | 145 |
primitive gut | 4.71e-13 | 145 |
endoderm-derived structure | 1.37e-12 | 160 |
endoderm | 1.37e-12 | 160 |
presumptive endoderm | 1.37e-12 | 160 |
subdivision of digestive tract | 2.82e-09 | 118 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.44e-16 | 106 |
cell type cancer | 1.69e-15 | 143 |
cancer | 8.90e-13 | 235 |
disease of cellular proliferation | 3.79e-12 | 239 |
squamous cell carcinoma | 7.52e-07 | 14 |