FFCP PHASE1:Hg19::chr19:47922373..47922384,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56917 | |EntrezGene=56917 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29537 | |HGNC=29537 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000559524_5end | |association_with_transcript=0bp_to_ENST00000559524_5end | ||
|cluster_id=chr19:47922373..47922384,- | |||
|description=CAGE_peak_5_at_MEIS3_5end | |description=CAGE_peak_5_at_MEIS3_5end | ||
|id=chr19:47922373..47922384,- | |id=chr19:47922373..47922384,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;5.96e-34;2!CL:0000333;1.40e-14;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.47e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.55e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;2.19e-12;6!DOID:171;5.73e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.19e-12,6;DOID:171,5.73e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002619!9.68e-13!22;UBERON:0001950!4.37e-12!20;UBERON:0001893!2.13e-11!34;UBERON:0001869!6.06e-11!32;UBERON:0000956!7.25e-11!25;UBERON:0000203!7.25e-11!25;UBERON:0002791!3.47e-10!33;UBERON:0007023!2.32e-09!115;UBERON:0000200!5.69e-09!6;UBERON:0002780!8.76e-09!41;UBERON:0001890!8.76e-09!41;UBERON:0006240!8.76e-09!41;UBERON:0003056!9.41e-09!61;UBERON:0002020!1.39e-08!34;UBERON:0003528!1.39e-08!34;UBERON:0000073!1.43e-08!94;UBERON:0001016!1.43e-08!94;UBERON:0003080!1.75e-08!42;UBERON:0005743!2.88e-08!86;UBERON:0000033!3.43e-08!123;UBERON:0001017!3.84e-08!82;UBERON:0000153!3.99e-08!129;UBERON:0007811!3.99e-08!129;UBERON:0000955!7.37e-08!69;UBERON:0006238!7.37e-08!69;UBERON:0003075!1.91e-07!86;UBERON:0007284!1.91e-07!86;UBERON:0002771!5.41e-07!3;UBERON:0002346!7.42e-07!90;UBERON:0001049!8.05e-07!57;UBERON:0005068!8.05e-07!57;UBERON:0006241!8.05e-07!57;UBERON:0007135!8.05e-07!57 | |ontology_enrichment_uberon=UBERON:0002619!9.68e-13!22;UBERON:0001950!4.37e-12!20;UBERON:0001893!2.13e-11!34;UBERON:0001869!6.06e-11!32;UBERON:0000956!7.25e-11!25;UBERON:0000203!7.25e-11!25;UBERON:0002791!3.47e-10!33;UBERON:0007023!2.32e-09!115;UBERON:0000200!5.69e-09!6;UBERON:0002780!8.76e-09!41;UBERON:0001890!8.76e-09!41;UBERON:0006240!8.76e-09!41;UBERON:0003056!9.41e-09!61;UBERON:0002020!1.39e-08!34;UBERON:0003528!1.39e-08!34;UBERON:0000073!1.43e-08!94;UBERON:0001016!1.43e-08!94;UBERON:0003080!1.75e-08!42;UBERON:0005743!2.88e-08!86;UBERON:0000033!3.43e-08!123;UBERON:0001017!3.84e-08!82;UBERON:0000153!3.99e-08!129;UBERON:0007811!3.99e-08!129;UBERON:0000955!7.37e-08!69;UBERON:0006238!7.37e-08!69;UBERON:0003075!1.91e-07!86;UBERON:0007284!1.91e-07!86;UBERON:0002771!5.41e-07!3;UBERON:0002346!7.42e-07!90;UBERON:0001049!8.05e-07!57;UBERON:0005068!8.05e-07!57;UBERON:0006241!8.05e-07!57;UBERON:0007135!8.05e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.40e-14;5!UBERON:0002410;1.40e-14;5!UBERON:0000010;1.04e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.40e-14,5;UBERON:0002410,1.40e-14,5;UBERON:0000010,1.04e-08,8;UBERON:0001016,1.68e-07,89 | |||
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| ||
|short_description=p5@MEIS3 | |short_description=p5@MEIS3 | ||
}} | }} |
Latest revision as of 23:51, 18 September 2015
Short description: | p5@MEIS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MEIS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000559524_5end |
EntrezGene: | MEIS3 |
HGNC: | 29537 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.47e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.40e-14 | 5 |
autonomic nervous system | 1.40e-14 | 5 |
peripheral nervous system | 1.04e-08 | 8 |
nervous system | 1.68e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.19e-12 | 6 |
neuroectodermal tumor | 5.73e-08 | 10 |