FFCP PHASE1:Hg19::chr3:160130156..160130170,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10051 | |EntrezGene=10051 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14013 | |HGNC=14013 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=33bp_to_ENST00000467263_5end | |association_with_transcript=33bp_to_ENST00000467263_5end | ||
|cluster_id=chr3:160130156..160130170,+ | |||
|coexpression_cluster_id=C1923 | |||
|description=CAGE_peak_11_at_SMC4_5end | |description=CAGE_peak_11_at_SMC4_5end | ||
|id=chr3:160130156..160130170,+ | |id=chr3:160130156..160130170,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.27e-39!239;DOID:162!7.92e-39!235;DOID:0050687!3.35e-19!143;DOID:0050686!2.96e-18!137;DOID:2531!1.25e-15!51;DOID:0060083!1.25e-15!51;DOID:305!4.12e-14!106;DOID:1240!1.61e-10!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;7.86e-08;51!DOID:0060083;7.86e-08;51!DOID:154;1.27e-07;2!DOID:4236;1.27e-07;2!DOID:1240;1.98e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.67e-16,235;DOID:14566,9.77e-16,239;DOID:2531,8.30e-11,51;DOID:0060083,8.30e-11,51;DOID:1240,2.40e-09,39;DOID:0050686,3.94e-08,137;DOID:154,1.56e-07,2;DOID:4236,1.56e-07,2;DOID:0050687,2.39e-07,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0.85870796139317,1.77936752594749,1.50651167513763,0.305653622991805,0.246301768349837,0.708397031823113,0,0,0,0,0,0,1.70427841276664,0.710846162437108,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0.272906150057846,0,0,0,0,0,0.398927315243264,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0.32592226663359,0,0,0,0.294605907474837,0,0,0.25618263945135,0.650296737799391,1.47994114143309,0.552700035571697,0,0,0,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0,0,0,0,0.361439152384566,0,0.289693037921647,0.795285947051099,0,0.661743720148475,0.665188192387692,0.966182642624386,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,1.10047216776027,0.417989933073621,0,0,0,0,0,0,0,0,0.267899184852239,0.22452937262617,0,0,0,0,0,0,0,0,0.633152558322899,0.264818361626438,0.286836620748814,2.83734705758686,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.298897361103602,0,0,0.140450806702248,0,1.47401180774122,0.103325781175765,0,0,0,0,0.168336113954066,0.375355559615893,0,0,0,0,0.226864366320042,0.89694817844431,0,0.211931901159562,0,0.206105058476878,0,0,0.675105328965065,0.0974370051611986,0.252433774244115,0,0,0,0.10075209822764,0.339121184620975,0.386521706326594,0,0,0.243947412259191,0.265059536642971,0.232387885739037,0.414644220061482,0.252320850875628,1.09493207722749,0,0,0,0,0,0.473227200159376,0.674338760312407,0.241011029883482,0.772057809126758,0,0.474541238222193,0.808987848960987,0.588664395376038,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0.441463099414651,0.245976877086227,0.514703430895577,0,0,0.904760751704678,0.185176890317059,0,0,0,0.231860809950154,0,0,0.925971025153221,0.570762456703795,0.790204397959275,0,0,0,0.445893486866185,0,0,0.425325291727159,0.806026704325635,0,0,0,0.352193736052904,0,0.144119953416961,0,0.761974731506028,0,0,0,0.102827492703324,0,0,0,0,0.4400297149257,0,0,0.845302752556,0,0,0,0,0.266422179016099,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,4.21667878966063,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0,0.896681151948218,0.394061520403854,0,0.128343036279748,0.76228387266739,0,0,0.167516265334349,0,0.749007023947182,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0.664225598535437,0,0.521301686808497,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0.321707842287215,0,2.46735510084249,0,0.164254312027618,0.519254429183621,0.697262270759755,0.362578348774867,0.200506470303285,0.368323955743585,0.229628896329213,0.364182336013434,0.131124414959424,0,0.308061348417659,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0.512900250232778,0,0,0,1.46511143709349,0.247528499761764,0,0,0,0,0,0.15350367472613,0.137836572484531,0.429680979473094,0.870100163485371,0.93749290157711,0.178064071293475,0.165284915360978,0,0.255225424989168,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.565621727814851,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0.79312517629427,0.320472213382419,0,0.735120647943095,3.34445715226294,0.577076851905779,0.995985806877798,1.75368900001705,1.39705560002972,0.191505370132367,0,1.62310970137278,1.68478306868075,0.228234679033192,1.72347885350326,0,0.677167111206413,1.92705690124439,3.22879531505676,0,0,1.22896305723383,0.671028323677248,0.834245708559542,0.781552381608161,0.556812347790485,0,0.811367035427949,0.33307196799782,0,0.18714054040822,0,0.36408156524854,2.00598091699461,0,0,0.593929361665277,0,0,0.140669416410513,0.222617410045812,0.824019371133798,0.844501632511974,0,0.276283915531148,0.503865495708552,0.306806047506464,0.492339221844278,0,0.539210106883961,0,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0.508507300585533,1.18193840883968,0.689486746482929,0.874813840149763,2.2571249341328,0,0.120596438625408,0,0,0.295547618953547,0,0.21787692703798,1.53366118706464,0.153900517007594,0,0.23056390438806,0.269272933229316,0.434589487688032,0,0,0,1.02193298195737,0.31396051279005,0,0.451191321234361,1.17637520590644,0.335643173951685,0.75901493089674,0.317873157960757,0.632994193584081,0.652931232636591,0.141353071433941,0.216388639742091,0,0,0,0.296521128680622,0.370691816839509,0.104421949505455,0,0,0,3.46664099509765,0.19566461893209,0.728341138602278,0.394584402849391,1.20990716048664,0.61214552326098,0,0,0.311064574191741,0,0,0,0,0,1.38674673013139,0.173559738335131,0.489961987071888,0.522355239482415,0,1.89184635718778,1.35458863804719,1.75414361006845,1.97077096927702,0.0969890164884194,0,0,0.685209623233754,1.58971689362392,0.0633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| ||
|short_description=p11@SMC4 | |short_description=p11@SMC4 | ||
}} | }} |
Latest revision as of 10:15, 16 September 2015
Short description: | p11@SMC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SMC4_5end |
Coexpression cluster: | C1923_acute_gall_diffuse_mesenchymal_Preadipocyte_epitheloid_papillary |
Association with transcript: | 33bp_to_ENST00000467263_5end |
EntrezGene: | SMC4 |
HGNC: | 14013 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cancer | 2.67e-16 | 235 |
disease of cellular proliferation | 9.77e-16 | 239 |
hematologic cancer | 8.30e-11 | 51 |
immune system cancer | 8.30e-11 | 51 |
leukemia | 2.40e-09 | 39 |
organ system cancer | 3.94e-08 | 137 |
mixed cell type cancer | 1.56e-07 | 2 |
carcinosarcoma | 1.56e-07 | 2 |
cell type cancer | 2.39e-07 | 143 |