FFCP PHASE1:Hg19::chr3:187930406..187930417,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4026 | |EntrezGene=4026 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6679 | |HGNC=6679 | ||
|TSSclassifier=strong | |||
|UniProt=C9J5C8 | |UniProt=C9J5C8 | ||
|association_with_transcript=-11bp_to_ENST00000420410_5end | |association_with_transcript=-11bp_to_ENST00000420410_5end | ||
|cluster_id=chr3:187930406..187930417,+ | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_8_at_LPP_5end | |description=CAGE_peak_8_at_LPP_5end | ||
|id=chr3:187930406..187930417,+ | |id=chr3:187930406..187930417,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002594;6.25e-07;4 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;2.13e-10;65!UBERON:0006965;6.49e-07;2!UBERON:0004872;9.86e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.14e-15!115;UBERON:0000481!6.56e-12!347;UBERON:0000477!1.43e-09!286;UBERON:0000468!1.99e-09!659;UBERON:0000062!3.20e-09!511;UBERON:0005256!3.57e-08!143;UBERON:0000467!3.94e-08!625;UBERON:0000480!4.84e-08!626;UBERON:0005156!5.26e-08!59;UBERON:0000990!5.26e-08!59;UBERON:0004111!1.78e-07!241;UBERON:0000483!2.16e-07!309;UBERON:0000119!2.17e-07!312;UBERON:0002100!2.78e-07!216;UBERON:0000059!5.89e-07!11;UBERON:0001155!6.27e-07!9;UBERON:0000922!6.31e-07!612;UBERON:0003103!8.42e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.65e-09;3!UBERON:0004054;1.65e-09;3!UBERON:0000160;3.16e-07;17!UBERON:0005904;3.22e-07;4!UBERON:0005409;5.18e-07;22!UBERON:0001310;6.25e-07;4!UBERON:0000059;8.01e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.41e-20,114;UBERON:0006947,1.04e-09,3;UBERON:0004054,1.04e-09,3;UBERON:0005409,2.36e-09,25;UBERON:0005904,2.29e-07,4;UBERON:0000160,2.76e-07,17;UBERON:0000059,7.68e-07,11 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.821246550437305,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32348744029695,0.886917589850256,0.790513071238134,3.79839318943367,0,0,1.29818957461873,1.0447784237956,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.25326102332916,0.397227542439656,0,0.709336764396714,0.560677600142307,0,0.24666754841716,0.311211035399766,0,0.163461903113459,0,0,0.468642863667593,0.312160076830321,0,0,0.117434498643765,0.971237666208789,0.561803226808994,0,0.491337269247072,0,0,0.494533858557114,0.910161361938026,0.718618141816238,0.505008341862199,0.500474079487857,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0,0.213557388818567,0,0,0,0,0,0.337552664482532,0,0,0.460249493211497,0,0,0.201504196455281,0.508681776931463,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0.4115740113314,0,0,0,0,0,0.245976877086227,0.514703430895577,0,0,0,0,0,0,0,0.231860809950154,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0.258543431515556,0,0.845302752556,1.32969058292435,0,0,0,0,0.714889968290738,0,0,0.65147236858747,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,0,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460385919864187,0,0.128139149255701,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0.120859449591622,0.200506470303285,0,0.229628896329213,0,0,0.902399225814824,0.539107359730903,2.35304930753057,0,0.949964660035881,0,0,0.215915916102139,0,0.541892875087706,0,0.254876273045038,0,0.895499018888713,0,0,0,0,0,2.98818933778395,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0,0.751941714077915,0,0.255679882248303,0.0890320356467374,0,0,0,0,0.464845549297286,0,0,0,0,0,0.55597265731176,1.00187420719394,0,1.58189712359363,1.71567174531442,0,0,0.318203247925937,0,0.539617372749944,0.823611089208164,0.942499218765491,0,1.58510321173008,0,0.975267478179181,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,1.01455188481352,2.16876448669825,0.845086807596724,0,0,2.1400263088875,0,0,0,0,0.349934720244983,0,0,0,2.54188262097304,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07667176470977,0,0,0,0,0,0,0,0,0,0,0,20.7217907781113,3.31540698637377,0,2.76125442755818,0,0.311039587661807,0,0.179021174675609,0,20.2218981555714,0,1.11136990144637,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0.658156191461918,0,0,14.774449632729,0,0,0,0,0,1.37396390102793,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0.141353071433941,0,4.97630965539252,9.11112914384393,7.33236173920351,0,0,0,0.067401132980677,0,0,0,0,0,5.91876604274086,1.20990716048664,0,3.22251556105289,0,0,0,0,0,0,1.13843818411917,0,0,0,0,1.92199335066233,0,0,0,0,17.8459790338692,0,0.677942222341597,0,0,0.126621591911757,0,0.0801588202515337,8.75157278431345,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,1.67569440763353,10.0830586565141,0,0.199679000498991,0,0.89268582976749,0.403100834920358,0.360299883542404,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0.295282444544246,0,0,0.272406812223151,0,0.275078873194468,0,0,0,0.425246896606173,0,1.57611414598396,0.209818352539992,0.528001682597033,0,0,2.1440859791201,0,0,0.542999601753713,0,0.326587360109409,0,0,0.170388021785422,0,0.146552233678082,0,0.129282956361551,0,1.19760786519031,0,4.48507132784318,1.25763444079733,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.931446044120752,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0.796483835818512,0,0.621051827505038,0.414706207840855,0,1.04349012362347,0,0.380805212168795,0.406870733204662,0.909243296012797,0.322231671127465,0.928067519756987,1.99047944349308,0,0.343395705182793,0,8.83294287600557,0,0,0.260994291965212,0,0,0,0,0.308801447160972,0,0.176689145945881,0,0,0.256241518587947,0,0,0,0.194860308839388,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,0,0.918736432059601,0.128458450192919,0,0,0,0,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,4.36219904425692,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,9.92422356778589,0,0,0,1.00885116665647,0,0,0.443511850813194,0,1.8863681038116,0.475788130837822,0,1.53651993149159,0,10.7535537205204,0,0,4.56579360254748,1.72742072974897,0,0.929195074296532,0,0,0,0,0,0,0,0,0,0,4.65725755210022,0,0,0,0.111855431797792,0,0,0,1.12929087541872,0,0,0,0,0,0,0,0,2.54674721756217,0.655678681511872,0,29.9080952539765,0,0.196308467114945,0,0.4226557275834,0,2.44358186747619,1.09578409555081,0,0,0,0,2.19100916473955,0,0,0,0.203974470572744,0,1.5870805215462,0,0,0,0,0.109265571963696,0,0.203977659483963,0,0,0,4.24360710022141,0.267964130156178,0,0.103432995861895,0.426467963801962,0,0,0,0.897054900644907,1.14564884900697,0.202117188958219,0.435433495793923,0.342233301085281,0.5388164241167,2.15166616178029,0.332660356546013,0,0,0,0,7.03922827210363,8.43465964861779,1.22068853494722,12.6493787095247,1.81146414231924,0 | |phase1_expression=0.54503513781167,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.821246550437305,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32348744029695,0.886917589850256,0.790513071238134,3.79839318943367,0,0,1.29818957461873,1.0447784237956,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.25326102332916,0.397227542439656,0,0.709336764396714,0.560677600142307,0,0.24666754841716,0.311211035399766,0,0.163461903113459,0,0,0.468642863667593,0.312160076830321,0,0,0.117434498643765,0.971237666208789,0.561803226808994,0,0.491337269247072,0,0,0.494533858557114,0.910161361938026,0.718618141816238,0.505008341862199,0.500474079487857,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0,0.213557388818567,0,0,0,0,0,0.337552664482532,0,0,0.460249493211497,0,0,0.201504196455281,0.508681776931463,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0.4115740113314,0,0,0,0,0,0.245976877086227,0.514703430895577,0,0,0,0,0,0,0,0.231860809950154,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0.258543431515556,0,0.845302752556,1.32969058292435,0,0,0,0,0.714889968290738,0,0,0.65147236858747,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,0,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460385919864187,0,0.128139149255701,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0.120859449591622,0.200506470303285,0,0.229628896329213,0,0,0.902399225814824,0.539107359730903,2.35304930753057,0,0.949964660035881,0,0,0.215915916102139,0,0.541892875087706,0,0.254876273045038,0,0.895499018888713,0,0,0,0,0,2.98818933778395,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0,0.751941714077915,0,0.255679882248303,0.0890320356467374,0,0,0,0,0.464845549297286,0,0,0,0,0,0.55597265731176,1.00187420719394,0,1.58189712359363,1.71567174531442,0,0,0.318203247925937,0,0.539617372749944,0.823611089208164,0.942499218765491,0,1.58510321173008,0,0.975267478179181,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,1.01455188481352,2.16876448669825,0.845086807596724,0,0,2.1400263088875,0,0,0,0,0.349934720244983,0,0,0,2.54188262097304,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07667176470977,0,0,0,0,0,0,0,0,0,0,0,20.7217907781113,3.31540698637377,0,2.76125442755818,0,0.311039587661807,0,0.179021174675609,0,20.2218981555714,0,1.11136990144637,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0.658156191461918,0,0,14.774449632729,0,0,0,0,0,1.37396390102793,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0.141353071433941,0,4.97630965539252,9.11112914384393,7.33236173920351,0,0,0,0.067401132980677,0,0,0,0,0,5.91876604274086,1.20990716048664,0,3.22251556105289,0,0,0,0,0,0,1.13843818411917,0,0,0,0,1.92199335066233,0,0,0,0,17.8459790338692,0,0.677942222341597,0,0,0.126621591911757,0,0.0801588202515337,8.75157278431345,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,1.67569440763353,10.0830586565141,0,0.199679000498991,0,0.89268582976749,0.403100834920358,0.360299883542404,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0.295282444544246,0,0,0.272406812223151,0,0.275078873194468,0,0,0,0.425246896606173,0,1.57611414598396,0.209818352539992,0.528001682597033,0,0,2.1440859791201,0,0,0.542999601753713,0,0.326587360109409,0,0,0.170388021785422,0,0.146552233678082,0,0.129282956361551,0,1.19760786519031,0,4.48507132784318,1.25763444079733,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.931446044120752,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0.796483835818512,0,0.621051827505038,0.414706207840855,0,1.04349012362347,0,0.380805212168795,0.406870733204662,0.909243296012797,0.322231671127465,0.928067519756987,1.99047944349308,0,0.343395705182793,0,8.83294287600557,0,0,0.260994291965212,0,0,0,0,0.308801447160972,0,0.176689145945881,0,0,0.256241518587947,0,0,0,0.194860308839388,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,0,0.918736432059601,0.128458450192919,0,0,0,0,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,4.36219904425692,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,9.92422356778589,0,0,0,1.00885116665647,0,0,0.443511850813194,0,1.8863681038116,0.475788130837822,0,1.53651993149159,0,10.7535537205204,0,0,4.56579360254748,1.72742072974897,0,0.929195074296532,0,0,0,0,0,0,0,0,0,0,4.65725755210022,0,0,0,0.111855431797792,0,0,0,1.12929087541872,0,0,0,0,0,0,0,0,2.54674721756217,0.655678681511872,0,29.9080952539765,0,0.196308467114945,0,0.4226557275834,0,2.44358186747619,1.09578409555081,0,0,0,0,2.19100916473955,0,0,0,0.203974470572744,0,1.5870805215462,0,0,0,0,0.109265571963696,0,0.203977659483963,0,0,0,4.24360710022141,0.267964130156178,0,0.103432995861895,0.426467963801962,0,0,0,0.897054900644907,1.14564884900697,0.202117188958219,0.435433495793923,0.342233301085281,0.5388164241167,2.15166616178029,0.332660356546013,0,0,0,0,7.03922827210363,8.43465964861779,1.22068853494722,12.6493787095247,1.81146414231924,0 | ||
|short_description=p8@LPP | |short_description=p8@LPP | ||
}} | }} |
Latest revision as of 07:35, 17 September 2015
Short description: | p8@LPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LPP_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | -11bp_to_ENST00000420410_5end |
EntrezGene: | LPP |
HGNC: | 6679 |
UniProt: | C9J5C8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 8.41e-20 | 114 |
male genital duct | 1.04e-09 | 3 |
internal male genitalia | 1.04e-09 | 3 |
gastrointestinal system | 2.36e-09 | 25 |
duct of male reproductive system | 2.29e-07 | 4 |
intestine | 2.76e-07 | 17 |
large intestine | 7.68e-07 | 11 |